RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 KRT25Q7Z3Z0 450 aa16.1■□□□□ 0.17
RANBP3-229ENST00000592771 RTKN2Q8IZC4 609 aa16.1■□□□□ 0.17
RANBP3-229ENST00000592771 PANX2Q96RD6 677 aa16.1■□□□□ 0.17
RANBP3-229ENST00000592771 CTAGE1Q96RT6 745 aa16.1■□□□□ 0.17
RANBP3-229ENST00000592771 PYM1Q9BRP8 204 aaKnown RBP16.1■□□□□ 0.17
RANBP3-229ENST00000592771 UBA5Q9GZZ9 404 aa16.1■□□□□ 0.17
RANBP3-229ENST00000592771 C6orf50Q9HD87 102 aa16.1■□□□□ 0.17
RANBP3-229ENST00000592771 A0A1B0GTH6 734 aa16.09■□□□□ 0.17
RANBP3-229ENST00000592771 ENTPD3O75355 529 aa16.09■□□□□ 0.17
RANBP3-229ENST00000592771 TADA3O75528 432 aa16.09■□□□□ 0.17
RANBP3-229ENST00000592771 GNA11P29992 359 aa16.09■□□□□ 0.17
RANBP3-229ENST00000592771 LONP1P36776 959 aaKnown RBP16.09■□□□□ 0.17
RANBP3-229ENST00000592771 TERF2Q15554 542 aa16.09■□□□□ 0.17
RANBP3-229ENST00000592771 E2F4Q16254 413 aa16.09■□□□□ 0.17
RANBP3-229ENST00000592771 ARHGAP29Q52LW3 1261 aa16.09■□□□□ 0.17
RANBP3-229ENST00000592771 TATDN1Q6P1N9 297 aa16.09■□□□□ 0.17
RANBP3-229ENST00000592771 TC2NQ8N9U0 490 aa16.09■□□□□ 0.17
RANBP3-229ENST00000592771 MKL1Q969V6 931 aa16.09■□□□□ 0.17
RANBP3-229ENST00000592771 DHX58Q96C10 678 aa16.09■□□□□ 0.17
RANBP3-229ENST00000592771 MTFR1LQ9H019 292 aa16.09■□□□□ 0.17
RANBP3-229ENST00000592771 FRMPD2Q68DX3 1309 aaPredicted RBP16.09■□□□□ 0.17
RANBP3-229ENST00000592771 SMCO2A6NFE2 343 aa16.09■□□□□ 0.17
RANBP3-229ENST00000592771 LAD1O00515 517 aa16.09■□□□□ 0.17
RANBP3-229ENST00000592771 CASQ1P31415 396 aa16.09■□□□□ 0.17
RANBP3-229ENST00000592771 RBM5P52756 815 aaKnown RBP eCLIP16.09■□□□□ 0.172e-10■■■□□ 16.1
RANBP3-229ENST00000592771 INF2Q27J81 1249 aa16.09■□□□□ 0.17
RANBP3-229ENST00000592771 GPATCH4Q5T3I0 446 aaKnown RBP16.09■□□□□ 0.17
RANBP3-229ENST00000592771 SPATA1Q5VX52 437 aa16.09■□□□□ 0.17
RANBP3-229ENST00000592771 GSDMAQ96QA5 445 aa16.09■□□□□ 0.17
RANBP3-229ENST00000592771 COL4A5P29400 1685 aa16.08■□□□□ 0.17
RANBP3-229ENST00000592771 URI1O94763 535 aaPredicted RBP16.08■□□□□ 0.16
RANBP3-229ENST00000592771 PRPHP41219 470 aa16.08■□□□□ 0.16
RANBP3-229ENST00000592771 EIF6P56537 245 aaKnown RBP16.08■□□□□ 0.16
RANBP3-229ENST00000592771 MAP3K9P80192 1104 aa16.08■□□□□ 0.16
RANBP3-229ENST00000592771 FMR1Q06787 632 aaKnown RBP eCLIP16.08■□□□□ 0.165e-15■■■■□ 20.3
RANBP3-229ENST00000592771 TCP10Q12799 353 aa16.08■□□□□ 0.16
RANBP3-229ENST00000592771 GRAMD1CQ8IYS0 662 aa16.08■□□□□ 0.16
RANBP3-229ENST00000592771 MTMR8Q96EF0 704 aa16.08■□□□□ 0.16
RANBP3-229ENST00000592771 PAGE5Q96GU1 130 aa16.08■□□□□ 0.16
RANBP3-229ENST00000592771 GMLQ99445 158 aa16.08■□□□□ 0.16
RANBP3-229ENST00000592771 ZNF446Q9NWS9 450 aa16.08■□□□□ 0.16
RANBP3-229ENST00000592771 NYAP2Q9P242 653 aa16.08■□□□□ 0.16
RANBP3-229ENST00000592771 SLURP2P0DP57 97 aa16.07■□□□□ 0.16
RANBP3-229ENST00000592771 POLD1P28340 1107 aa16.07■□□□□ 0.16
RANBP3-229ENST00000592771 CLCN6P51797 869 aa16.07■□□□□ 0.16
RANBP3-229ENST00000592771 TUBB4BP68371 445 aa16.07■□□□□ 0.16
RANBP3-229ENST00000592771 ORC2Q13416 577 aaPredicted RBP16.07■□□□□ 0.16
RANBP3-229ENST00000592771 TUBB2AQ13885 445 aa16.07■□□□□ 0.16
RANBP3-229ENST00000592771 SOGA3Q5TF21 947 aa16.07■□□□□ 0.16
RANBP3-229ENST00000592771 PPP1R18Q6NYC8 613 aa16.07■□□□□ 0.16
RANBP3-229ENST00000592771 TMCO3Q6UWJ1 677 aa16.07■□□□□ 0.16
RANBP3-229ENST00000592771 TUBB2BQ9BVA1 445 aa16.07■□□□□ 0.16
RANBP3-229ENST00000592771 VPS33BQ9H267 617 aa16.07■□□□□ 0.16
RANBP3-229ENST00000592771 VAT1LQ9HCJ6 419 aa16.07■□□□□ 0.16
RANBP3-229ENST00000592771 ARFGEF1Q9Y6D6 1849 aa16.07■□□□□ 0.16
RANBP3-229ENST00000592771 MPHOSPH10O00566 681 aaKnown RBP16.07■□□□□ 0.16
RANBP3-229ENST00000592771 ZRANB2O95218 330 aaKnown RBP eCLIP16.07■□□□□ 0.16
RANBP3-229ENST00000592771 VIL1P09327 827 aaKnown RBP16.07■□□□□ 0.16
RANBP3-229ENST00000592771 DPEP1P16444 411 aa16.07■□□□□ 0.16
RANBP3-229ENST00000592771 DPYDQ12882 1025 aa16.07■□□□□ 0.16
RANBP3-229ENST00000592771 NONOQ15233 471 aaKnown RBP eCLIP16.07■□□□□ 0.161e-6■■■□□ 17.3
RANBP3-229ENST00000592771 CERKLQ49MI3 558 aaPredicted RBP16.07■□□□□ 0.16
RANBP3-229ENST00000592771 PDXDC2PQ6P474 469 aa16.07■□□□□ 0.16
RANBP3-229ENST00000592771 RSBN1LQ6PCB5 846 aaPredicted RBP16.07■□□□□ 0.16
RANBP3-229ENST00000592771 ZNF771Q7L3S4 317 aaPredicted RBP16.07■□□□□ 0.16
RANBP3-229ENST00000592771 GPR161Q8N6U8 529 aaKnown RBP16.07■□□□□ 0.16
RANBP3-229ENST00000592771 CCDC51Q96ER9 411 aa16.07■□□□□ 0.16
RANBP3-229ENST00000592771 PRMT6Q96LA8 375 aaPredicted RBP16.07■□□□□ 0.16
RANBP3-229ENST00000592771 TMEM60Q9H2L4 133 aa16.07■□□□□ 0.16
RANBP3-229ENST00000592771 TDRD3Q9H7E2 651 aaKnown RBP16.07■□□□□ 0.16
RANBP3-229ENST00000592771 JMJD4Q9H9V9 463 aa16.07■□□□□ 0.16
RANBP3-229ENST00000592771 GPCPD1Q9NPB8 672 aa16.07■□□□□ 0.16
RANBP3-229ENST00000592771 ZHX1Q9UKY1 873 aaPredicted RBP16.07■□□□□ 0.16
RANBP3-229ENST00000592771 PNMA6FA0A0J9YX94 578 aa16.06■□□□□ 0.16
RANBP3-229ENST00000592771 AKR1B15C9JRZ8 316 aaPredicted RBP16.06■□□□□ 0.16
RANBP3-229ENST00000592771 IQUBQ8NA54 791 aa16.06■□□□□ 0.16
RANBP3-229ENST00000592771 KANSL2Q9H9L4 492 aa16.06■□□□□ 0.16
RANBP3-229ENST00000592771 FHOD1Q9Y613 1164 aa16.06■□□□□ 0.16
RANBP3-229ENST00000592771 FAM196BA6NMK8 535 aa16.06■□□□□ 0.16
RANBP3-229ENST00000592771 FILIP1LQ4L180 1135 aa16.06■□□□□ 0.16
RANBP3-229ENST00000592771 JAKMIP3Q5VZ66 844 aa16.06■□□□□ 0.16
RANBP3-229ENST00000592771 ZSCAN29Q8IWY8 852 aaPredicted RBP16.06■□□□□ 0.16
RANBP3-229ENST00000592771 ADGRF4Q8IZF3 695 aa16.06■□□□□ 0.16
RANBP3-229ENST00000592771 REXO1Q8N1G1 1221 aaKnown RBP16.06■□□□□ 0.16
RANBP3-229ENST00000592771 DCAF4Q8WV16 495 aa16.06■□□□□ 0.16
RANBP3-229ENST00000592771 CCDC175P0C221 793 aa16.05■□□□□ 0.16
RANBP3-229ENST00000592771 GNG11P61952 73 aa16.05■□□□□ 0.16
RANBP3-229ENST00000592771 CUL4BQ13620 913 aa16.05■□□□□ 0.16
RANBP3-229ENST00000592771 TTBK2Q6IQ55 1244 aa16.05■□□□□ 0.16
RANBP3-229ENST00000592771 DTHD1Q6ZMT9 781 aa16.05■□□□□ 0.16
RANBP3-229ENST00000592771 TMEM179Q6ZVK1 233 aa16.05■□□□□ 0.16
RANBP3-229ENST00000592771 NEK8Q86SG6 692 aa16.05■□□□□ 0.16
RANBP3-229ENST00000592771 SIAH1Q8IUQ4 282 aa16.05■□□□□ 0.16
RANBP3-229ENST00000592771 MRFAP1Q9Y605 127 aa16.05■□□□□ 0.16
RANBP3-229ENST00000592771 ITIH6Q6UXX5 1313 aa16.05■□□□□ 0.16
RANBP3-229ENST00000592771 SPDYE2BA6NHP3 402 aa16.04■□□□□ 0.16
RANBP3-229ENST00000592771 PPP1R11O60927 126 aaPredicted RBP16.04■□□□□ 0.16
RANBP3-229ENST00000592771 SPDYE6P0CI01 402 aa16.04■□□□□ 0.16
RANBP3-229ENST00000592771 PNMA6AP0CW24 399 aaPredicted RBP16.04■□□□□ 0.16
RANBP3-229ENST00000592771 EEF2P13639 858 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms