RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 UPF3AQ9H1J1 476 aaKnown RBP21.63■■□□□ 1.05
CIRBP-237ENST00000592234 TCP11L1Q9NUJ3 509 aa21.63■■□□□ 1.05
CIRBP-237ENST00000592234 ELP1O95163 1332 aa21.62■■□□□ 1.05
CIRBP-237ENST00000592234 ICAM1P05362 532 aa21.62■■□□□ 1.05
CIRBP-237ENST00000592234 MFAP1P55081 439 aaKnown RBP21.62■■□□□ 1.05
CIRBP-237ENST00000592234 FAAP100Q0VG06 881 aa21.62■■□□□ 1.05
CIRBP-237ENST00000592234 GNASQ5JWF2 1037 aa21.62■■□□□ 1.05
CIRBP-237ENST00000592234 TTBK2Q6IQ55 1244 aa21.62■■□□□ 1.05
CIRBP-237ENST00000592234 NSMFQ6X4W1 530 aa21.62■■□□□ 1.05
CIRBP-237ENST00000592234 MFSD6Q6ZSS7 791 aa21.62■■□□□ 1.05
CIRBP-237ENST00000592234 NOL8Q76FK4 1167 aaKnown RBP21.62■■□□□ 1.05
CIRBP-237ENST00000592234 CHD1LQ86WJ1 897 aa21.62■■□□□ 1.05
CIRBP-237ENST00000592234 MROH7Q68CQ1 1323 aa21.61■■□□□ 1.05
CIRBP-237ENST00000592234 FRMPD2Q68DX3 1309 aaPredicted RBP21.61■■□□□ 1.05
CIRBP-237ENST00000592234 SDSP20132 328 aa21.61■■□□□ 1.05
CIRBP-237ENST00000592234 SLC16A2P36021 539 aa21.61■■□□□ 1.05
CIRBP-237ENST00000592234 TNFAIP2Q03169 654 aa21.61■■□□□ 1.05
CIRBP-237ENST00000592234 AKNAD1Q5T1N1 836 aa21.61■■□□□ 1.05
CIRBP-237ENST00000592234 ZNF697Q5TEC3 545 aa21.61■■□□□ 1.05
CIRBP-237ENST00000592234 BTNL9Q6UXG8 535 aa21.61■■□□□ 1.05
CIRBP-237ENST00000592234 RANBP17Q9H2T7 1088 aaKnown RBP21.61■■□□□ 1.05
CIRBP-237ENST00000592234 GPCPD1Q9NPB8 672 aa21.61■■□□□ 1.05
CIRBP-237ENST00000592234 CYP39A1Q9NYL5 469 aa21.61■■□□□ 1.05
CIRBP-237ENST00000592234 LAMA4Q16363 1823 aa21.61■■□□□ 1.05
CIRBP-237ENST00000592234 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.6■■□□□ 1.05
CIRBP-237ENST00000592234 PCP11498 1178 aaKnown RBP21.6■■□□□ 1.05
CIRBP-237ENST00000592234 SYDE2Q5VT97 1194 aa21.6■■□□□ 1.05
CIRBP-237ENST00000592234 PLEKHM2Q8IWE5 1019 aa21.6■■□□□ 1.05
CIRBP-237ENST00000592234 FAM161BQ96MY7 647 aa21.6■■□□□ 1.05
CIRBP-237ENST00000592234 A0A0U1RQG5 324 aaPredicted RBP21.59■■□□□ 1.05
CIRBP-237ENST00000592234 FPGSQ05932 587 aa21.59■■□□□ 1.05
CIRBP-237ENST00000592234 OSBPL3Q9H4L5 887 aa21.59■■□□□ 1.05
CIRBP-237ENST00000592234 RNF41Q9H4P4 317 aaPredicted RBP21.59■■□□□ 1.05
CIRBP-237ENST00000592234 ASTN1O14525 1302 aa21.58■■□□□ 1.05
CIRBP-237ENST00000592234 PDHBP11177 359 aa21.58■■□□□ 1.05
CIRBP-237ENST00000592234 BEX3Q00994 111 aa21.58■■□□□ 1.05
CIRBP-237ENST00000592234 NUCB1Q02818 461 aa21.58■■□□□ 1.05
CIRBP-237ENST00000592234 EEPD1Q7L9B9 569 aa21.58■■□□□ 1.05
CIRBP-237ENST00000592234 TLK2Q86UE8 772 aa21.58■■□□□ 1.05
CIRBP-237ENST00000592234 TBC1D10CQ8IV04 446 aa21.58■■□□□ 1.05
CIRBP-237ENST00000592234 RNPC3Q96LT9 517 aaKnown RBP21.58■■□□□ 1.05
CIRBP-237ENST00000592234 TTC14Q96N46 770 aa21.58■■□□□ 1.05
CIRBP-237ENST00000592234 GUCD1Q96NT3 240 aa21.58■■□□□ 1.05
CIRBP-237ENST00000592234 DDX49Q9Y6V7 483 aaKnown RBP21.58■■□□□ 1.05
CIRBP-237ENST00000592234 ARVCFO00192 962 aa21.57■■□□□ 1.04
CIRBP-237ENST00000592234 ZNF213O14771 459 aa21.57■■□□□ 1.04
CIRBP-237ENST00000592234 CTAGE5O15320 804 aa21.57■■□□□ 1.04
CIRBP-237ENST00000592234 TIMP1P01033 207 aa21.57■■□□□ 1.04
CIRBP-237ENST00000592234 CDK7P50613 346 aa21.57■■□□□ 1.04
CIRBP-237ENST00000592234 EPHB4P54760 987 aa21.57■■□□□ 1.04
CIRBP-237ENST00000592234 NKX3-2P78367 333 aa21.57■■□□□ 1.04
CIRBP-237ENST00000592234 SMAD3P84022 425 aaKnown RBP21.57■■□□□ 1.04
CIRBP-237ENST00000592234 CWC27Q6UX04 472 aaKnown RBP21.57■■□□□ 1.04
CIRBP-237ENST00000592234 FBXO16Q8IX29 292 aaPredicted RBP21.57■■□□□ 1.04
CIRBP-237ENST00000592234 ESR2Q92731 530 aa21.57■■□□□ 1.04
CIRBP-237ENST00000592234 AP5M1Q9H0R1 490 aa21.57■■□□□ 1.04
CIRBP-237ENST00000592234 DIAPH3Q9NSV4 1193 aa21.57■■□□□ 1.04
CIRBP-237ENST00000592234 TBX21Q9UL17 535 aa21.57■■□□□ 1.04
CIRBP-237ENST00000592234 GNEQ9Y223 722 aaKnown RBP21.57■■□□□ 1.04
CIRBP-237ENST00000592234 TLR3O15455 904 aaKnown RBP21.56■■□□□ 1.04
CIRBP-237ENST00000592234 SMPD1P17405 629 aa21.56■■□□□ 1.04
CIRBP-237ENST00000592234 BAATQ14032 418 aaPredicted RBP21.56■■□□□ 1.04
CIRBP-237ENST00000592234 IQSEC1Q6DN90 963 aa21.56■■□□□ 1.04
CIRBP-237ENST00000592234 PURBQ96QR8 312 aaKnown RBP21.56■■□□□ 1.04
CIRBP-237ENST00000592234 VTA1Q9NP79 307 aa21.56■■□□□ 1.04
CIRBP-237ENST00000592234 PDGFCQ9NRA1 345 aa21.56■■□□□ 1.04
CIRBP-237ENST00000592234 ADD3Q9UEY8 706 aaKnown RBP21.56■■□□□ 1.04
CIRBP-237ENST00000592234 NEDD4P46934 1319 aa21.55■■□□□ 1.04
CIRBP-237ENST00000592234 MYH6P13533 1939 aa21.55■■□□□ 1.04
CIRBP-237ENST00000592234 PTPDC1A2A3K4 754 aa21.55■■□□□ 1.04
CIRBP-237ENST00000592234 NFIBO00712 420 aa21.55■■□□□ 1.04
CIRBP-237ENST00000592234 DYNC1LI2O43237 492 aaPredicted RBP21.55■■□□□ 1.04
CIRBP-237ENST00000592234 ZNF543Q08ER8 600 aa21.55■■□□□ 1.04
CIRBP-237ENST00000592234 TAPT1Q6NXT6 567 aa21.55■■□□□ 1.04
CIRBP-237ENST00000592234 ZKSCAN3Q9BRR0 538 aa21.55■■□□□ 1.04
CIRBP-237ENST00000592234 PNMA2Q9UL42 364 aa21.55■■□□□ 1.04
CIRBP-237ENST00000592234 HIP1O00291 1037 aa21.54■■□□□ 1.04
CIRBP-237ENST00000592234 ZEB2O60315 1214 aa21.54■■□□□ 1.04
CIRBP-237ENST00000592234 CABYRO75952 493 aa21.54■■□□□ 1.04
CIRBP-237ENST00000592234 ALDH5A1P51649 535 aaPredicted RBP21.54■■□□□ 1.04
CIRBP-237ENST00000592234 FSCN1Q16658 493 aaKnown RBP21.54■■□□□ 1.04
CIRBP-237ENST00000592234 MFSD5Q6N075 450 aa21.54■■□□□ 1.04
CIRBP-237ENST00000592234 CXCL17Q6UXB2 119 aa21.54■■□□□ 1.04
CIRBP-237ENST00000592234 KIAA1211Q6ZU35 1233 aa21.54■■□□□ 1.04
CIRBP-237ENST00000592234 FAM126BQ8IXS8 530 aa21.54■■□□□ 1.04
CIRBP-237ENST00000592234 MORC4Q8TE76 937 aa21.54■■□□□ 1.04
CIRBP-237ENST00000592234 DLL1O00548 723 aa21.53■■□□□ 1.04
CIRBP-237ENST00000592234 SNHG28P0DPA3 235 aa21.53■■□□□ 1.04
CIRBP-237ENST00000592234 PTGS1P23219 599 aa21.53■■□□□ 1.04
CIRBP-237ENST00000592234 SEMA6BQ9H3T3 888 aa21.53■■□□□ 1.04
CIRBP-237ENST00000592234 Q9Y3F1 56 aa21.53■■□□□ 1.04
CIRBP-237ENST00000592234 LOC102724159A0A0B4J2E5 919 aa21.52■■□□□ 1.04
CIRBP-237ENST00000592234 CALML3P27482 149 aa21.52■■□□□ 1.04
CIRBP-237ENST00000592234 NT5C2P49902 561 aa21.52■■□□□ 1.04
CIRBP-237ENST00000592234 PPIGQ13427 754 aaKnown RBP eCLIP21.52■■□□□ 1.041e-10■■■□□ 15.9
CIRBP-237ENST00000592234 PWP2Q15269 919 aaKnown RBP21.52■■□□□ 1.04
CIRBP-237ENST00000592234 CCDC178Q5BJE1 867 aa21.52■■□□□ 1.04
CIRBP-237ENST00000592234 GPATCH4Q5T3I0 446 aaKnown RBP21.52■■□□□ 1.04
CIRBP-237ENST00000592234 SLC30A10Q6XR72 485 aa21.52■■□□□ 1.04
CIRBP-237ENST00000592234 RNF207Q6ZRF8 634 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms