RNA–Protein interactions for RNA: ENST00000591662.1

CNTNAP1-204, Transcript of contactin associated protein 1, humanhuman

TSL 1 (best)

Gene CNTNAP1, Length 4,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-204ENST00000591662 GBP5Q96PP8 586 aa12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 HINFPQ9BQA5 517 aa12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 LMTK3Q96Q04 1460 aa12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 LGALS16A8MUM7 142 aa12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 SATB1Q01826 763 aa12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 CTDSPL2Q05D32 466 aa12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 NBPF10Q6P3W6 841 aaKnown RBP12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 KRT25Q7Z3Z0 450 aa12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 SMYD4Q8IYR2 804 aaPredicted RBP12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 STAG1Q8WVM7 1258 aa12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 KLHL29Q96CT2 875 aa12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 NAP1L4Q99733 375 aaKnown RBP12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 ARMT1Q9H993 441 aa12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 SLC52A2Q9HAB3 445 aa12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 LARSQ9P2J5 1176 aaKnown RBP12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 TEX33O43247 280 aa12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 STX2P32856 288 aa12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 PTPN12Q05209 780 aaKnown RBP12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 PUM3Q15397 648 aaKnown RBP12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 TRIM65Q6PJ69 517 aa12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 METTL16Q86W50 562 aaKnown RBP12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 ZNF594Q96JF6 807 aaPredicted RBP12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 ATP6V1G3Q96LB4 118 aa12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 IQCGQ9H095 443 aaKnown RBP12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 PCDHA13Q9Y5I0 950 aa12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 A0A1W2PQC6 194 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 CFAP73A6NFT4 308 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 CIB2O75838 187 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 RRP36Q96EU6 259 aaKnown RBP12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 SH3GL3Q99963 347 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 NLRC4Q9NPP4 1024 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 NFU1Q9UMS0 254 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 BZW2Q9Y6E2 419 aaKnown RBP12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 CRB1P82279 1406 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 EVI5O60447 810 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 PLCG2P16885 1265 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 RASSF7Q02833 373 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 EHHADHQ08426 723 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 CCDC174Q6PII3 467 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 IFNL3Q8IZI9 196 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 MCUR1Q96AQ8 359 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 TRIM4Q9C037 500 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 ATG3Q9NT62 314 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 PSMD14O00487 310 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 MAP2K7O14733 419 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 N4BP1O75113 896 aaKnown RBP12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 GCFC2P16383 781 aaKnown RBP12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 LETM2Q2VYF4 491 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 PHLDB2Q86SQ0 1253 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 MIGA1Q8NAN2 632 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 P2RX5Q93086 422 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 MCM9Q9NXL9 1143 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 ABCA9Q8IUA7 1624 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 M0R2C6 588 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 PGRMC1O00264 195 aaKnown RBP12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 GNPATO15228 680 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 SLC7A5Q01650 507 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 PICALMQ13492 652 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 TRIM68Q6AZZ1 485 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 MIPOL1Q8TD10 442 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 ANKRD2Q9GZV1 360 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 NEURL4Q96JN8 1562 aa12.09□□□□□ -0.47
CNTNAP1-204ENST00000591662 LAD1O00515 517 aa12.08□□□□□ -0.48
CNTNAP1-204ENST00000591662 SRGAP2O75044 1071 aa12.08□□□□□ -0.48
CNTNAP1-204ENST00000591662 SASH3O75995 380 aa12.08□□□□□ -0.48
CNTNAP1-204ENST00000591662 PHLDB3Q6NSJ2 640 aa12.08□□□□□ -0.48
CNTNAP1-204ENST00000591662 ARHGEF2Q92974 986 aaKnown RBP12.08□□□□□ -0.48
CNTNAP1-204ENST00000591662 PNKPQ96T60 521 aa12.08□□□□□ -0.48
CNTNAP1-204ENST00000591662 ATP6V0A2Q9Y487 856 aa12.08□□□□□ -0.48
CNTNAP1-204ENST00000591662 USP6P35125 1406 aa12.08□□□□□ -0.48
CNTNAP1-204ENST00000591662 MOCS3O95396 460 aa12.08□□□□□ -0.48
CNTNAP1-204ENST00000591662 A1BGP04217 495 aa12.08□□□□□ -0.48
CNTNAP1-204ENST00000591662 EPB41P11171 864 aaKnown RBP12.08□□□□□ -0.48
CNTNAP1-204ENST00000591662 KIF11P52732 1056 aa12.08□□□□□ -0.48
CNTNAP1-204ENST00000591662 PARP10Q53GL7 1025 aa12.08□□□□□ -0.48
CNTNAP1-204ENST00000591662 C10orf76Q5T2E6 689 aa12.08□□□□□ -0.48
CNTNAP1-204ENST00000591662 GALNT17Q6IS24 598 aa12.08□□□□□ -0.48
CNTNAP1-204ENST00000591662 RAD9BQ6WBX8 426 aa12.08□□□□□ -0.48
CNTNAP1-204ENST00000591662 LPIN2Q92539 896 aa12.08□□□□□ -0.48
CNTNAP1-204ENST00000591662 OSBP2Q969R2 916 aa12.08□□□□□ -0.48
CNTNAP1-204ENST00000591662 PLAAQ9Y263 795 aa12.08□□□□□ -0.48
CNTNAP1-204ENST00000591662 ABCC12Q96J65 1359 aa12.08□□□□□ -0.48
CNTNAP1-204ENST00000591662 CCDC188H7C350 402 aa12.08□□□□□ -0.48
CNTNAP1-204ENST00000591662 CCNE1P24864 410 aa12.08□□□□□ -0.48
CNTNAP1-204ENST00000591662 NONOQ15233 471 aaKnown RBP eCLIP12.08□□□□□ -0.48
CNTNAP1-204ENST00000591662 MAN2A1Q16706 1144 aa12.08□□□□□ -0.48
CNTNAP1-204ENST00000591662 HS2ST1Q7LGA3 356 aa12.08□□□□□ -0.48
CNTNAP1-204ENST00000591662 PACS2Q86VP3 889 aa12.08□□□□□ -0.48
CNTNAP1-204ENST00000591662 ANKRD13CQ8N6S4 541 aa12.08□□□□□ -0.48
CNTNAP1-204ENST00000591662 NOVA2Q9UNW9 492 aaKnown RBP12.08□□□□□ -0.48
CNTNAP1-204ENST00000591662 PCDHB6Q9Y5E3 794 aa12.08□□□□□ -0.48
CNTNAP1-204ENST00000591662 TNFAIP3P21580 790 aa12.07□□□□□ -0.48
CNTNAP1-204ENST00000591662 CTNNA2P26232 953 aa12.07□□□□□ -0.48
CNTNAP1-204ENST00000591662 CYP27A1Q02318 531 aa12.07□□□□□ -0.48
CNTNAP1-204ENST00000591662 ACTN3Q08043 901 aaPredicted RBP12.07□□□□□ -0.48
CNTNAP1-204ENST00000591662 MAP7Q14244 749 aa12.07□□□□□ -0.48
CNTNAP1-204ENST00000591662 TRAPPC3LQ5T215 181 aa12.07□□□□□ -0.48
CNTNAP1-204ENST00000591662 ADD3Q9UEY8 706 aaKnown RBP12.07□□□□□ -0.48
CNTNAP1-204ENST00000591662 LIMA1Q9UHB6 759 aaKnown RBP12.07□□□□□ -0.48
CNTNAP1-204ENST00000591662 PRR36Q9H6K5 1346 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms