RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 INHBCP55103 352 aa13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 CCDC38Q502W7 563 aa13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 ZNF280DQ6N043 979 aa13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 C16orf87Q6PH81 154 aa13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 RNF168Q8IYW5 571 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 HELBQ8NG08 1087 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 ZKSCAN3Q9BRR0 538 aa13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 FAM167BQ9BTA0 163 aa13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 STRN4Q9NRL3 753 aa13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 KCNJ14Q9UNX9 436 aa13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 PHF24Q9UPV7 400 aa13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 C2CD2Q9Y426 696 aa13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 RASSF10A6NK89 507 aa13.53□□□□□ -0.24
SMARCA4-217ENST00000591595 POLR2DO15514 142 aaKnown RBP13.53□□□□□ -0.24
SMARCA4-217ENST00000591595 VCAM1P19320 739 aa13.53□□□□□ -0.24
SMARCA4-217ENST00000591595 ADD2P35612 726 aa13.53□□□□□ -0.24
SMARCA4-217ENST00000591595 MXRA7P84157 204 aa13.53□□□□□ -0.24
SMARCA4-217ENST00000591595 MSL1Q68DK7 614 aa13.53□□□□□ -0.24
SMARCA4-217ENST00000591595 TRIM22Q8IYM9 498 aa13.53□□□□□ -0.24
SMARCA4-217ENST00000591595 PCMTD2Q9NV79 361 aa13.53□□□□□ -0.24
SMARCA4-217ENST00000591595 GALNT8Q9NY28 637 aa13.53□□□□□ -0.24
SMARCA4-217ENST00000591595 NOP53Q9NZM5 478 aaKnown RBP13.53□□□□□ -0.24
SMARCA4-217ENST00000591595 L3MBTL1Q9Y468 752 aa13.53□□□□□ -0.24
SMARCA4-217ENST00000591595 PCDH11XQ9BZA7 1347 aa13.53□□□□□ -0.24
SMARCA4-217ENST00000591595 PCDH11YQ9BZA8 1340 aa13.53□□□□□ -0.24
SMARCA4-217ENST00000591595 C1orf167Q5SNV9 1468 aa13.53□□□□□ -0.24
SMARCA4-217ENST00000591595 AFDNP55196 1824 aaKnown RBP13.53□□□□□ -0.24
SMARCA4-217ENST00000591595 LSP1P33241 339 aa13.53□□□□□ -0.24
SMARCA4-217ENST00000591595 SLC7A5Q01650 507 aa13.53□□□□□ -0.24
SMARCA4-217ENST00000591595 DYNC1I2Q13409 638 aaKnown RBP13.53□□□□□ -0.24
SMARCA4-217ENST00000591595 KLHL10Q6JEL2 608 aa13.53□□□□□ -0.24
SMARCA4-217ENST00000591595 C6orf89Q6UWU4 347 aa13.53□□□□□ -0.24
SMARCA4-217ENST00000591595 CCDC80Q76M96 950 aa13.53□□□□□ -0.24
SMARCA4-217ENST00000591595 SMCR8Q8TEV9 937 aaPredicted RBP13.53□□□□□ -0.24
SMARCA4-217ENST00000591595 ZWILCHQ9H900 591 aa13.53□□□□□ -0.24
SMARCA4-217ENST00000591595 WDR35Q9P2L0 1181 aa13.53□□□□□ -0.24
SMARCA4-217ENST00000591595 LRRD1A4D1F6 860 aa13.52□□□□□ -0.24
SMARCA4-217ENST00000591595 IPO5O00410 1097 aaKnown RBP13.52□□□□□ -0.24
SMARCA4-217ENST00000591595 HDLBPQ00341 1268 aaKnown RBP13.52□□□□□ -0.24
SMARCA4-217ENST00000591595 CTDSPL2Q05D32 466 aa13.52□□□□□ -0.24
SMARCA4-217ENST00000591595 TTF1Q15361 905 aaPredicted RBP13.52□□□□□ -0.24
SMARCA4-217ENST00000591595 RESP18Q5W5W9 173 aa13.52□□□□□ -0.24
SMARCA4-217ENST00000591595 DIS3L2Q8IYB7 885 aaKnown RBP13.52□□□□□ -0.24
SMARCA4-217ENST00000591595 CMTR1Q8N1G2 835 aaKnown RBP13.52□□□□□ -0.24
SMARCA4-217ENST00000591595 DESI2Q9BSY9 194 aa13.52□□□□□ -0.24
SMARCA4-217ENST00000591595 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.52□□□□□ -0.24
SMARCA4-217ENST00000591595 UBA5Q9GZZ9 404 aa13.52□□□□□ -0.24
SMARCA4-217ENST00000591595 NACA2Q9H009 215 aa13.52□□□□□ -0.24
SMARCA4-217ENST00000591595 HSD3B7Q9H2F3 369 aa13.52□□□□□ -0.24
SMARCA4-217ENST00000591595 GREM2Q9H772 168 aa13.52□□□□□ -0.24
SMARCA4-217ENST00000591595 SLC5A4Q9NY91 659 aa13.52□□□□□ -0.24
SMARCA4-217ENST00000591595 HPSEQ9Y251 543 aa13.52□□□□□ -0.24
SMARCA4-217ENST00000591595 F8VZ95 297 aa13.52□□□□□ -0.25
SMARCA4-217ENST00000591595 DIAPH2O60879 1101 aa13.52□□□□□ -0.25
SMARCA4-217ENST00000591595 GNAQP50148 359 aa13.52□□□□□ -0.25
SMARCA4-217ENST00000591595 ELF3P78545 371 aaPredicted RBP13.52□□□□□ -0.25
SMARCA4-217ENST00000591595 PTPAQ15257 358 aa13.52□□□□□ -0.25
SMARCA4-217ENST00000591595 SPRED3Q2MJR0 410 aa13.52□□□□□ -0.25
SMARCA4-217ENST00000591595 KBTBD12Q3ZCT8 623 aa13.52□□□□□ -0.25
SMARCA4-217ENST00000591595 ANKRD20A8PQ5CZ79 823 aa13.52□□□□□ -0.25
SMARCA4-217ENST00000591595 FOXP4Q8IVH2 680 aaPredicted RBP13.52□□□□□ -0.25
SMARCA4-217ENST00000591595 NKX2-3Q8TAU0 364 aa13.52□□□□□ -0.25
SMARCA4-217ENST00000591595 CPLX3Q8WVH0 158 aa13.52□□□□□ -0.25
SMARCA4-217ENST00000591595 TMEM87BQ96K49 555 aa13.52□□□□□ -0.25
SMARCA4-217ENST00000591595 TBC1D7Q9P0N9 293 aa13.52□□□□□ -0.25
SMARCA4-217ENST00000591595 CPDO75976 1380 aa13.52□□□□□ -0.25
SMARCA4-217ENST00000591595 DPPA5A6NC42 116 aa13.52□□□□□ -0.25
SMARCA4-217ENST00000591595 PDE4BQ07343 736 aa13.52□□□□□ -0.25
SMARCA4-217ENST00000591595 WHAMMP3Q1A5X7 153 aa13.52□□□□□ -0.25
SMARCA4-217ENST00000591595 OGFOD1Q8N543 542 aa13.52□□□□□ -0.25
SMARCA4-217ENST00000591595 CCHCR1Q8TD31 782 aa13.52□□□□□ -0.25
SMARCA4-217ENST00000591595 CCT8L2Q96SF2 557 aa13.52□□□□□ -0.25
SMARCA4-217ENST00000591595 ISCA1Q9BUE6 129 aa13.52□□□□□ -0.25
SMARCA4-217ENST00000591595 PIH1D3Q9NQM4 214 aaKnown RBP13.52□□□□□ -0.25
SMARCA4-217ENST00000591595 KIF5CO60282 957 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 VIL1P09327 827 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 PDE6AP16499 860 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 CNGA1P29973 690 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 ABL2P42684 1182 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 ATP1A2P50993 1020 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 PABPC4Q13310 644 aaKnown RBP eCLIP13.51□□□□□ -0.253e-7■■■□□ 14.6
SMARCA4-217ENST00000591595 POSTNQ15063 836 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 NOSTRINQ8IVI9 506 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 GRAMD1CQ8IYS0 662 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 KCNN1Q92952 543 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 SLC35B4Q969S0 331 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 TEKT1Q969V4 418 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 DHRS1Q96LJ7 313 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 SELENOOQ9BVL4 669 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 OSBPL7Q9BZF2 842 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 LZTFL1Q9NQ48 299 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 DACH1Q9UI36 760 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 WWC3Q9ULE0 1092 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 CTAGE9A4FU28 777 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 ALDH3A1P30838 453 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 PHKA1P46020 1223 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 SCTRP47872 440 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 TSNAXIP1Q2TAA8 658 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 DPY19L2Q6NUT2 758 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 MYCBPAPQ8TBZ2 947 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms