RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 PLIN4Q96Q06 1357 aa7.55□□□□□ -1.2
VPS4B-205ENST00000591383 WDR33Q9C0J8 1336 aaKnown RBP7.54□□□□□ -1.2
VPS4B-205ENST00000591383 POTEMA6NI47 508 aa7.54□□□□□ -1.2
VPS4B-205ENST00000591383 B4E1Z4 1266 aa7.54□□□□□ -1.2
VPS4B-205ENST00000591383 SLC27A2O14975 620 aa7.54□□□□□ -1.2
VPS4B-205ENST00000591383 ORC4O43929 436 aa7.54□□□□□ -1.2
VPS4B-205ENST00000591383 CYP21A2P08686 494 aa7.54□□□□□ -1.2
VPS4B-205ENST00000591383 PTPRAP18433 802 aa7.54□□□□□ -1.2
VPS4B-205ENST00000591383 MCCP23508 829 aa7.54□□□□□ -1.2
VPS4B-205ENST00000591383 SCTRP47872 440 aa7.54□□□□□ -1.2
VPS4B-205ENST00000591383 VEGFBP49765 207 aa7.54□□□□□ -1.2
VPS4B-205ENST00000591383 JAG1P78504 1218 aa7.54□□□□□ -1.2
VPS4B-205ENST00000591383 ARHGAP4P98171 946 aa7.54□□□□□ -1.2
VPS4B-205ENST00000591383 TRDNQ13061 729 aa7.54□□□□□ -1.2
VPS4B-205ENST00000591383 NOGQ13253 232 aa7.54□□□□□ -1.2
VPS4B-205ENST00000591383 SPRYD7Q5W111 196 aa7.54□□□□□ -1.2
VPS4B-205ENST00000591383 CREB3L3Q68CJ9 461 aa7.54□□□□□ -1.2
VPS4B-205ENST00000591383 TATDN1Q6P1N9 297 aa7.54□□□□□ -1.2
VPS4B-205ENST00000591383 GADL1Q6ZQY3 521 aa7.54□□□□□ -1.2
VPS4B-205ENST00000591383 TMEM179Q6ZVK1 233 aa7.54□□□□□ -1.2
VPS4B-205ENST00000591383 ERO1BQ86YB8 467 aa7.54□□□□□ -1.2
VPS4B-205ENST00000591383 ZNF444Q8N0Y2 327 aaPredicted RBP7.54□□□□□ -1.2
VPS4B-205ENST00000591383 STAG1Q8WVM7 1258 aa7.54□□□□□ -1.2
VPS4B-205ENST00000591383 HHIPL1Q96JK4 782 aa7.54□□□□□ -1.2
VPS4B-205ENST00000591383 ASB16Q96NS5 453 aa7.54□□□□□ -1.2
VPS4B-205ENST00000591383 AS3MTQ9HBK9 375 aa7.54□□□□□ -1.2
VPS4B-205ENST00000591383 INCENPQ9NQS7 918 aa7.54□□□□□ -1.2
VPS4B-205ENST00000591383 ANAPC4Q9UJX5 808 aa7.54□□□□□ -1.2
VPS4B-205ENST00000591383 TAF6LQ9Y6J9 622 aa7.54□□□□□ -1.2
VPS4B-205ENST00000591383 ZHX2Q9Y6X8 837 aa7.54□□□□□ -1.2
VPS4B-205ENST00000591383 PCNTO95613 3336 aa7.54□□□□□ -1.2
VPS4B-205ENST00000591383 CCL15-CCL14A0A0B4J2E2 113 aa7.53□□□□□ -1.2
VPS4B-205ENST00000591383 FAM155AB1AL88 458 aaPredicted RBP7.53□□□□□ -1.2
VPS4B-205ENST00000591383 ZBTB48P10074 688 aaPredicted RBP7.53□□□□□ -1.2
VPS4B-205ENST00000591383 HMGCS2P54868 508 aa7.53□□□□□ -1.2
VPS4B-205ENST00000591383 TAGLNQ01995 201 aaKnown RBP7.53□□□□□ -1.2
VPS4B-205ENST00000591383 MAP3K10Q02779 954 aa7.53□□□□□ -1.2
VPS4B-205ENST00000591383 PPATQ06203 517 aa7.53□□□□□ -1.2
VPS4B-205ENST00000591383 SNAPC2Q13487 334 aa7.53□□□□□ -1.2
VPS4B-205ENST00000591383 DGKZQ13574 1117 aa7.53□□□□□ -1.2
VPS4B-205ENST00000591383 CCL15Q16663 113 aa7.53□□□□□ -1.2
VPS4B-205ENST00000591383 C8orf34Q49A92 452 aa7.53□□□□□ -1.2
VPS4B-205ENST00000591383 LRRC47Q8N1G4 583 aaKnown RBP7.53□□□□□ -1.2
VPS4B-205ENST00000591383 ESR2Q92731 530 aa7.53□□□□□ -1.2
VPS4B-205ENST00000591383 MAP4K1Q92918 833 aa7.53□□□□□ -1.2
VPS4B-205ENST00000591383 COL26A1Q96A83 441 aa7.53□□□□□ -1.2
VPS4B-205ENST00000591383 CHMP4CQ96CF2 233 aa7.53□□□□□ -1.2
VPS4B-205ENST00000591383 CCDC17Q96LX7 622 aa7.53□□□□□ -1.2
VPS4B-205ENST00000591383 UBAC1Q9BSL1 405 aa7.53□□□□□ -1.2
VPS4B-205ENST00000591383 CNNM2Q9H8M5 875 aa7.53□□□□□ -1.2
VPS4B-205ENST00000591383 ARHGEF10LQ9HCE6 1279 aa7.53□□□□□ -1.2
VPS4B-205ENST00000591383 STX8Q9UNK0 236 aa7.53□□□□□ -1.2
VPS4B-205ENST00000591383 TACC3Q9Y6A5 838 aa7.53□□□□□ -1.2
VPS4B-205ENST00000591383 MANSC4A6NHS7 340 aaPredicted RBP7.52□□□□□ -1.21
VPS4B-205ENST00000591383 TMEM229AB2RXF0 380 aa7.52□□□□□ -1.21
VPS4B-205ENST00000591383 E7EWF7 191 aa7.52□□□□□ -1.21
VPS4B-205ENST00000591383 ERVH48-1M5A8F1 160 aa7.52□□□□□ -1.21
VPS4B-205ENST00000591383 NMT2O60551 498 aa7.52□□□□□ -1.21
VPS4B-205ENST00000591383 PCP11498 1178 aaKnown RBP7.52□□□□□ -1.21
VPS4B-205ENST00000591383 ZKSCAN1P17029 563 aaPredicted RBP7.52□□□□□ -1.21
VPS4B-205ENST00000591383 IGFBP4P22692 258 aa7.52□□□□□ -1.21
VPS4B-205ENST00000591383 GUCY1A2P33402 732 aa7.52□□□□□ -1.21
VPS4B-205ENST00000591383 GTF2A2P52657 109 aa7.52□□□□□ -1.21
VPS4B-205ENST00000591383 TFAP4Q01664 338 aa7.52□□□□□ -1.21
VPS4B-205ENST00000591383 KIF23Q02241 960 aaPredicted RBP7.52□□□□□ -1.21
VPS4B-205ENST00000591383 SREBF2Q12772 1141 aa7.52□□□□□ -1.21
VPS4B-205ENST00000591383 SPP2Q13103 211 aa7.52□□□□□ -1.21
VPS4B-205ENST00000591383 NAA30Q147X3 362 aaPredicted RBP7.52□□□□□ -1.21
VPS4B-205ENST00000591383 INTS6LQ5JSJ4 861 aaKnown RBP7.52□□□□□ -1.21
VPS4B-205ENST00000591383 STOX1Q6ZVD7 989 aa7.52□□□□□ -1.21
VPS4B-205ENST00000591383 ZNF280CQ8ND82 737 aa7.52□□□□□ -1.21
VPS4B-205ENST00000591383 ACER1Q8TDN7 264 aa7.52□□□□□ -1.21
VPS4B-205ENST00000591383 CEP95Q96GE4 821 aa7.52□□□□□ -1.21
VPS4B-205ENST00000591383 JAKMIP1Q96N16 626 aaKnown RBP7.52□□□□□ -1.21
VPS4B-205ENST00000591383 ZIC5Q96T25 663 aa7.52□□□□□ -1.21
VPS4B-205ENST00000591383 ZKSCAN3Q9BRR0 538 aa7.52□□□□□ -1.21
VPS4B-205ENST00000591383 KRT23Q9C075 422 aa7.52□□□□□ -1.21
VPS4B-205ENST00000591383 SH2D4AQ9H788 454 aa7.52□□□□□ -1.21
VPS4B-205ENST00000591383 GINM1Q9NU53 330 aa7.52□□□□□ -1.21
VPS4B-205ENST00000591383 TMOD4Q9NZQ9 345 aa7.52□□□□□ -1.21
VPS4B-205ENST00000591383 A0A0G2JMZ2 1700 aa7.52□□□□□ -1.21
VPS4B-205ENST00000591383 TNKSO95271 1327 aa7.52□□□□□ -1.21
VPS4B-205ENST00000591383 PARP14Q460N5 1801 aa7.51□□□□□ -1.21
VPS4B-205ENST00000591383 EIF5BO60841 1220 aaKnown RBP7.51□□□□□ -1.21
VPS4B-205ENST00000591383 CETPP11597 493 aa7.51□□□□□ -1.21
VPS4B-205ENST00000591383 EEF2P13639 858 aaKnown RBP7.51□□□□□ -1.21
VPS4B-205ENST00000591383 TCF3P15923 654 aa7.51□□□□□ -1.21
VPS4B-205ENST00000591383 VAMP1P23763 118 aa7.51□□□□□ -1.21
VPS4B-205ENST00000591383 PTPN5P54829 565 aa7.51□□□□□ -1.21
VPS4B-205ENST00000591383 SART3Q15020 963 aaKnown RBP7.51□□□□□ -1.21
VPS4B-205ENST00000591383 CCDC96Q2M329 555 aa7.51□□□□□ -1.21
VPS4B-205ENST00000591383 CHST3Q7LGC8 479 aa7.51□□□□□ -1.21
VPS4B-205ENST00000591383 IQCA1Q86XH1 822 aa7.51□□□□□ -1.21
VPS4B-205ENST00000591383 SPICE1Q8N0Z3 855 aa7.51□□□□□ -1.21
VPS4B-205ENST00000591383 NEDD1Q8NHV4 660 aa7.51□□□□□ -1.21
VPS4B-205ENST00000591383 NCOA7Q8NI08 942 aa7.51□□□□□ -1.21
VPS4B-205ENST00000591383 BRI3BPQ8WY22 251 aa7.51□□□□□ -1.21
VPS4B-205ENST00000591383 KRTAP3-3Q9BYR6 98 aa7.51□□□□□ -1.21
VPS4B-205ENST00000591383 KRTAP3-2Q9BYR7 98 aa7.51□□□□□ -1.21
VPS4B-205ENST00000591383 TANGO6Q9C0B7 1094 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms