RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 SHHQ15465 462 aa21.09■□□□□ 0.97
VAT1-208ENST00000590924 KCNA10Q16322 511 aa21.09■□□□□ 0.97
VAT1-208ENST00000590924 ANKRD33Q7Z3H0 272 aa21.09■□□□□ 0.97
VAT1-208ENST00000590924 DCAF4Q8WV16 495 aa21.09■□□□□ 0.97
VAT1-208ENST00000590924 CHMP4CQ96CF2 233 aa21.09■□□□□ 0.97
VAT1-208ENST00000590924 TOX2Q96NM4 488 aa21.09■□□□□ 0.97
VAT1-208ENST00000590924 U3KPZ7 1027 aaPredicted RBP21.09■□□□□ 0.97
VAT1-208ENST00000590924 MYADML2A6NDP7 307 aa21.08■□□□□ 0.97
VAT1-208ENST00000590924 PQBP1O60828 265 aaKnown RBP21.08■□□□□ 0.97
VAT1-208ENST00000590924 C6orf222P0C671 652 aaPredicted RBP21.08■□□□□ 0.97
VAT1-208ENST00000590924 ALAS1P13196 640 aa21.08■□□□□ 0.97
VAT1-208ENST00000590924 GJA9P57773 515 aa21.08■□□□□ 0.97
VAT1-208ENST00000590924 C9orf50Q5SZB4 431 aa21.08■□□□□ 0.97
VAT1-208ENST00000590924 PCSK9Q8NBP7 692 aaKnown RBP21.08■□□□□ 0.97
VAT1-208ENST00000590924 TRERF1Q96PN7 1200 aa21.08■□□□□ 0.97
VAT1-208ENST00000590924 SPC25Q9HBM1 224 aa21.08■□□□□ 0.97
VAT1-208ENST00000590924 ELP1O95163 1332 aa21.07■□□□□ 0.96
VAT1-208ENST00000590924 EPB41L2O43491 1005 aaKnown RBP21.07■□□□□ 0.96
VAT1-208ENST00000590924 PCP11498 1178 aaKnown RBP21.07■□□□□ 0.96
VAT1-208ENST00000590924 ITGB8P26012 769 aa21.07■□□□□ 0.96
VAT1-208ENST00000590924 NT5C2P49902 561 aa21.07■□□□□ 0.96
VAT1-208ENST00000590924 PTH1RQ03431 593 aa21.07■□□□□ 0.96
VAT1-208ENST00000590924 CCDC96Q2M329 555 aa21.07■□□□□ 0.96
VAT1-208ENST00000590924 CCDC174Q6PII3 467 aa21.07■□□□□ 0.96
VAT1-208ENST00000590924 SLC17A8Q8NDX2 589 aa21.07■□□□□ 0.96
VAT1-208ENST00000590924 GLT1D1Q96MS3 346 aa21.07■□□□□ 0.96
VAT1-208ENST00000590924 LSG1Q9H089 658 aaKnown RBP21.07■□□□□ 0.96
VAT1-208ENST00000590924 TOMM22Q9NS69 142 aa21.07■□□□□ 0.96
VAT1-208ENST00000590924 TCP11L1Q9NUJ3 509 aa21.07■□□□□ 0.96
VAT1-208ENST00000590924 MROH7Q68CQ1 1323 aa21.06■□□□□ 0.96
VAT1-208ENST00000590924 SOWAHBA6NEL2 793 aa21.06■□□□□ 0.96
VAT1-208ENST00000590924 ASB14A6NK59 587 aa21.06■□□□□ 0.96
VAT1-208ENST00000590924 DCDC2CA8MYV0 355 aa21.06■□□□□ 0.96
VAT1-208ENST00000590924 ZNF213O14771 459 aa21.06■□□□□ 0.96
VAT1-208ENST00000590924 TOP1P11387 765 aaKnown RBP21.06■□□□□ 0.96
VAT1-208ENST00000590924 RAG1P15918 1043 aa21.06■□□□□ 0.96
VAT1-208ENST00000590924 NKX3-2P78367 333 aa21.06■□□□□ 0.96
VAT1-208ENST00000590924 IRX5P78411 483 aaPredicted RBP21.06■□□□□ 0.96
VAT1-208ENST00000590924 FAAP100Q0VG06 881 aa21.06■□□□□ 0.96
VAT1-208ENST00000590924 IMMTQ16891 758 aaKnown RBP21.06■□□□□ 0.96
VAT1-208ENST00000590924 RRP12Q5JTH9 1297 aaKnown RBP21.06■□□□□ 0.96
VAT1-208ENST00000590924 BTNL9Q6UXG8 535 aa21.06■□□□□ 0.96
VAT1-208ENST00000590924 RANBP17Q9H2T7 1088 aaKnown RBP21.06■□□□□ 0.96
VAT1-208ENST00000590924 TMEM39AQ9NV64 488 aa21.06■□□□□ 0.96
VAT1-208ENST00000590924 MTMR7Q9Y216 660 aa21.06■□□□□ 0.96
VAT1-208ENST00000590924 ASTN1O14525 1302 aa21.05■□□□□ 0.96
VAT1-208ENST00000590924 REC8O95072 547 aa21.05■□□□□ 0.96
VAT1-208ENST00000590924 ICAM1P05362 532 aa21.05■□□□□ 0.96
VAT1-208ENST00000590924 ASGR1P07306 291 aa21.05■□□□□ 0.96
VAT1-208ENST00000590924 SNAP25P60880 206 aa21.05■□□□□ 0.96
VAT1-208ENST00000590924 MUM1L1Q5H9M0 696 aa21.05■□□□□ 0.96
VAT1-208ENST00000590924 TMEM47Q9BQJ4 181 aa21.05■□□□□ 0.96
VAT1-208ENST00000590924 ANO2Q9NQ90 1003 aa21.05■□□□□ 0.96
VAT1-208ENST00000590924 CYP39A1Q9NYL5 469 aa21.05■□□□□ 0.96
VAT1-208ENST00000590924 CCPG1Q9ULG6 757 aa21.05■□□□□ 0.96
VAT1-208ENST00000590924 CTAGE5O15320 804 aa21.04■□□□□ 0.96
VAT1-208ENST00000590924 GNASQ5JWF2 1037 aa21.04■□□□□ 0.96
VAT1-208ENST00000590924 CDK7P50613 346 aa21.03■□□□□ 0.96
VAT1-208ENST00000590924 HAND2P61296 217 aa21.03■□□□□ 0.96
VAT1-208ENST00000590924 TNFAIP2Q03169 654 aa21.03■□□□□ 0.96
VAT1-208ENST00000590924 AKNAD1Q5T1N1 836 aa21.03■□□□□ 0.96
VAT1-208ENST00000590924 ZNF697Q5TEC3 545 aa21.03■□□□□ 0.96
VAT1-208ENST00000590924 SYDE2Q5VT97 1194 aa21.03■□□□□ 0.96
VAT1-208ENST00000590924 TTBK2Q6IQ55 1244 aa21.03■□□□□ 0.96
VAT1-208ENST00000590924 GUCD1Q96NT3 240 aa21.03■□□□□ 0.96
VAT1-208ENST00000590924 RNF41Q9H4P4 317 aaPredicted RBP21.03■□□□□ 0.96
VAT1-208ENST00000590924 TBX21Q9UL17 535 aa21.03■□□□□ 0.96
VAT1-208ENST00000590924 MYO9BQ13459 2157 aa21.02■□□□□ 0.96
VAT1-208ENST00000590924 A0A0U1RQG5 324 aaPredicted RBP21.02■□□□□ 0.96
VAT1-208ENST00000590924 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.02■□□□□ 0.96
VAT1-208ENST00000590924 PDHBP11177 359 aa21.02■□□□□ 0.96
VAT1-208ENST00000590924 SLC16A2P36021 539 aa21.02■□□□□ 0.96
VAT1-208ENST00000590924 SMAD3P84022 425 aaKnown RBP21.02■□□□□ 0.96
VAT1-208ENST00000590924 FPGSQ05932 587 aa21.02■□□□□ 0.96
VAT1-208ENST00000590924 MFSD6Q6ZSS7 791 aa21.02■□□□□ 0.96
VAT1-208ENST00000590924 TBC1D10CQ8IV04 446 aa21.02■□□□□ 0.96
VAT1-208ENST00000590924 TTC14Q96N46 770 aa21.02■□□□□ 0.96
VAT1-208ENST00000590924 GNEQ9Y223 722 aaKnown RBP21.02■□□□□ 0.96
VAT1-208ENST00000590924 RBM8AQ9Y5S9 174 aaKnown RBP21.02■□□□□ 0.96
VAT1-208ENST00000590924 KIAA1217Q5T5P2 1943 aa21.02■□□□□ 0.95
VAT1-208ENST00000590924 ARVCFO00192 962 aa21.01■□□□□ 0.95
VAT1-208ENST00000590924 EPHB4P54760 987 aa21.01■□□□□ 0.95
VAT1-208ENST00000590924 NECTIN1Q15223 517 aa21.01■□□□□ 0.95
VAT1-208ENST00000590924 NSMFQ6X4W1 530 aa21.01■□□□□ 0.95
VAT1-208ENST00000590924 TLK2Q86UE8 772 aa21.01■□□□□ 0.95
VAT1-208ENST00000590924 MORC4Q8TE76 937 aa21.01■□□□□ 0.95
VAT1-208ENST00000590924 FRMPD2Q68DX3 1309 aaPredicted RBP21.01■□□□□ 0.95
VAT1-208ENST00000590924 GBF1Q92538 1859 aa21.01■□□□□ 0.95
VAT1-208ENST00000590924 TIMP1P01033 207 aa21■□□□□ 0.95
VAT1-208ENST00000590924 RNPC3Q96LT9 517 aaKnown RBP21■□□□□ 0.95
VAT1-208ENST00000590924 GPCPD1Q9NPB8 672 aa21■□□□□ 0.95
VAT1-208ENST00000590924 PNMA2Q9UL42 364 aa21■□□□□ 0.95
VAT1-208ENST00000590924 CDH23Q9H251 3354 aa20.99■□□□□ 0.95
VAT1-208ENST00000590924 LOC102724159A0A0B4J2E5 919 aa20.99■□□□□ 0.95
VAT1-208ENST00000590924 CYP21A2P08686 494 aa20.99■□□□□ 0.95
VAT1-208ENST00000590924 SNHG28P0DPA3 235 aa20.99■□□□□ 0.95
VAT1-208ENST00000590924 BEX3Q00994 111 aa20.99■□□□□ 0.95
VAT1-208ENST00000590924 ZNF543Q08ER8 600 aa20.99■□□□□ 0.95
VAT1-208ENST00000590924 PWP2Q15269 919 aaKnown RBP20.99■□□□□ 0.95
VAT1-208ENST00000590924 RNF20Q5VTR2 975 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms