RNA–Protein interactions for RNA: ENST00000590116.5

ZNF554-203, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 2,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-203ENST00000590116 COL24A1Q17RW2 1714 aa23.37■■□□□ 1.33
ZNF554-203ENST00000590116 LAD1O00515 517 aa23.37■■□□□ 1.33
ZNF554-203ENST00000590116 MAP2K7O14733 419 aa23.37■■□□□ 1.33
ZNF554-203ENST00000590116 BAG3O95817 575 aa23.37■■□□□ 1.33
ZNF554-203ENST00000590116 FCER1AP12319 257 aa23.37■■□□□ 1.33
ZNF554-203ENST00000590116 PIP4K2BP78356 416 aa23.37■■□□□ 1.33
ZNF554-203ENST00000590116 AMPD2Q01433 879 aa23.37■■□□□ 1.33
ZNF554-203ENST00000590116 TSR1Q2NL82 804 aaKnown RBP23.37■■□□□ 1.33
ZNF554-203ENST00000590116 USP17L2Q6R6M4 530 aa23.37■■□□□ 1.33
ZNF554-203ENST00000590116 CSGALNACT2Q8N6G5 542 aa23.37■■□□□ 1.33
ZNF554-203ENST00000590116 CAPN11Q9UMQ6 739 aa23.37■■□□□ 1.33
ZNF554-203ENST00000590116 RGL2O15211 777 aa23.36■■□□□ 1.33
ZNF554-203ENST00000590116 PDE11AQ9HCR9 933 aa23.36■■□□□ 1.33
ZNF554-203ENST00000590116 TCP11L1Q9NUJ3 509 aa23.36■■□□□ 1.33
ZNF554-203ENST00000590116 SRGAP2O75044 1071 aa23.36■■□□□ 1.33
ZNF554-203ENST00000590116 RPS6KA4O75676 772 aa23.36■■□□□ 1.33
ZNF554-203ENST00000590116 PRPHP41219 470 aa23.36■■□□□ 1.33
ZNF554-203ENST00000590116 STK4Q13043 487 aa23.36■■□□□ 1.33
ZNF554-203ENST00000590116 PDE4DQ08499 809 aa23.35■■□□□ 1.33
ZNF554-203ENST00000590116 TUBGCP2Q9BSJ2 902 aa23.35■■□□□ 1.33
ZNF554-203ENST00000590116 ZNF831Q5JPB2 1677 aa23.35■■□□□ 1.33
ZNF554-203ENST00000590116 RASSF10A6NK89 507 aa23.35■■□□□ 1.33
ZNF554-203ENST00000590116 ERLIN1O75477 346 aa23.35■■□□□ 1.33
ZNF554-203ENST00000590116 OR52Z1P0C646 297 aa23.35■■□□□ 1.33
ZNF554-203ENST00000590116 TECP42680 631 aa23.35■■□□□ 1.33
ZNF554-203ENST00000590116 DNM2P50570 870 aa23.35■■□□□ 1.33
ZNF554-203ENST00000590116 TUBB4BP68371 445 aa23.35■■□□□ 1.33
ZNF554-203ENST00000590116 ASIC1P78348 528 aa23.35■■□□□ 1.33
ZNF554-203ENST00000590116 ANKRD40Q6AI12 368 aa23.35■■□□□ 1.33
ZNF554-203ENST00000590116 GPIHBP1Q8IV16 184 aa23.35■■□□□ 1.33
ZNF554-203ENST00000590116 SNED1Q8TER0 1413 aa23.35■■□□□ 1.33
ZNF554-203ENST00000590116 N4BP1O75113 896 aaKnown RBP23.34■■□□□ 1.33
ZNF554-203ENST00000590116 ATP1A1P05023 1023 aaKnown RBP23.34■■□□□ 1.33
ZNF554-203ENST00000590116 NT5C2P49902 561 aa23.34■■□□□ 1.33
ZNF554-203ENST00000590116 GSTO1P78417 241 aa23.34■■□□□ 1.33
ZNF554-203ENST00000590116 DHTKD1Q96HY7 919 aaPredicted RBP23.34■■□□□ 1.33
ZNF554-203ENST00000590116 TRIM9Q9C026 710 aa23.34■■□□□ 1.33
ZNF554-203ENST00000590116 ZMYND12Q9H0C1 365 aa23.34■■□□□ 1.33
ZNF554-203ENST00000590116 TRIM21P19474 475 aaKnown RBP23.34■■□□□ 1.33
ZNF554-203ENST00000590116 CCDC122Q5T0U0 273 aa23.34■■□□□ 1.33
ZNF554-203ENST00000590116 HDXQ7Z353 690 aa23.34■■□□□ 1.33
ZNF554-203ENST00000590116 ARHGEF1Q92888 912 aaKnown RBP23.34■■□□□ 1.33
ZNF554-203ENST00000590116 CNOT6LQ96LI5 555 aaKnown RBP23.34■■□□□ 1.33
ZNF554-203ENST00000590116 HAUS4Q9H6D7 363 aa23.34■■□□□ 1.33
ZNF554-203ENST00000590116 EXOC1Q9NV70 894 aa23.34■■□□□ 1.33
ZNF554-203ENST00000590116 RCCD1A6NED2 376 aa23.33■■□□□ 1.33
ZNF554-203ENST00000590116 SMCO2A6NFE2 343 aa23.33■■□□□ 1.33
ZNF554-203ENST00000590116 SRGNP10124 158 aa23.33■■□□□ 1.33
ZNF554-203ENST00000590116 PCMTD1Q96MG8 357 aaPredicted RBP23.33■■□□□ 1.33
ZNF554-203ENST00000590116 EYA3Q99504 573 aa23.33■■□□□ 1.33
ZNF554-203ENST00000590116 TMEM260Q9NX78 707 aa23.33■■□□□ 1.33
ZNF554-203ENST00000590116 BTDP43251 543 aa23.33■■□□□ 1.32
ZNF554-203ENST00000590116 HNRNPH2P55795 449 aaKnown RBP23.33■■□□□ 1.32
ZNF554-203ENST00000590116 NONOQ15233 471 aaKnown RBP eCLIP23.33■■□□□ 1.32
ZNF554-203ENST00000590116 NOC3LQ8WTT2 800 aaKnown RBP23.33■■□□□ 1.32
ZNF554-203ENST00000590116 P2RX5Q93086 422 aa23.33■■□□□ 1.32
ZNF554-203ENST00000590116 CAPZA3Q96KX2 299 aa23.33■■□□□ 1.32
ZNF554-203ENST00000590116 AK8Q96MA6 479 aa23.33■■□□□ 1.32
ZNF554-203ENST00000590116 LZTS2Q9BRK4 669 aa23.33■■□□□ 1.32
ZNF554-203ENST00000590116 RTFDC1Q9BY42 306 aaPredicted RBP23.33■■□□□ 1.32
ZNF554-203ENST00000590116 CUEDC2Q9H467 287 aa23.33■■□□□ 1.32
ZNF554-203ENST00000590116 DDX60LQ5H9U9 1706 aaKnown RBP23.32■■□□□ 1.32
ZNF554-203ENST00000590116 PPP4CP60510 307 aa23.32■■□□□ 1.32
ZNF554-203ENST00000590116 KRT25Q7Z3Z0 450 aa23.32■■□□□ 1.32
ZNF554-203ENST00000590116 POTEDQ86YR6 584 aa23.32■■□□□ 1.32
ZNF554-203ENST00000590116 BIN2Q9UBW5 565 aaPredicted RBP23.32■■□□□ 1.32
ZNF554-203ENST00000590116 L1RE1Q9UN81 338 aa23.32■■□□□ 1.32
ZNF554-203ENST00000590116 CDK5RAP2Q96SN8 1893 aa23.32■■□□□ 1.32
ZNF554-203ENST00000590116 PSMD14O00487 310 aa23.32■■□□□ 1.32
ZNF554-203ENST00000590116 TBC1D8BQ0IIM8 1120 aa23.32■■□□□ 1.32
ZNF554-203ENST00000590116 CCDC47Q96A33 483 aaKnown RBP23.32■■□□□ 1.32
ZNF554-203ENST00000590116 SPZ1Q9BXG8 430 aa23.32■■□□□ 1.32
ZNF554-203ENST00000590116 TTYH3Q9C0H2 523 aa23.32■■□□□ 1.32
ZNF554-203ENST00000590116 LACRTQ9GZZ8 138 aa23.32■■□□□ 1.32
ZNF554-203ENST00000590116 UBA5Q9GZZ9 404 aa23.32■■□□□ 1.32
ZNF554-203ENST00000590116 CCNE1P24864 410 aa23.31■■□□□ 1.32
ZNF554-203ENST00000590116 MTIF2P46199 727 aaKnown RBP23.31■■□□□ 1.32
ZNF554-203ENST00000590116 CDK8P49336 464 aa23.31■■□□□ 1.32
ZNF554-203ENST00000590116 RC3H1Q5TC82 1133 aaKnown RBP23.31■■□□□ 1.32
ZNF554-203ENST00000590116 TRAPPC11Q7Z392 1133 aa23.31■■□□□ 1.32
ZNF554-203ENST00000590116 KIAA1328Q86T90 577 aa23.31■■□□□ 1.32
ZNF554-203ENST00000590116 PIGSQ96S52 555 aa23.31■■□□□ 1.32
ZNF554-203ENST00000590116 MAGEF1Q9HAY2 307 aa23.31■■□□□ 1.32
ZNF554-203ENST00000590116 CALCOCO1Q9P1Z2 691 aa23.31■■□□□ 1.32
ZNF554-203ENST00000590116 DUSP10Q9Y6W6 482 aa23.31■■□□□ 1.32
ZNF554-203ENST00000590116 ERCC3P19447 782 aa23.31■■□□□ 1.32
ZNF554-203ENST00000590116 CYP27A1Q02318 531 aa23.31■■□□□ 1.32
ZNF554-203ENST00000590116 SEMA3FQ13275 785 aa23.31■■□□□ 1.32
ZNF554-203ENST00000590116 TBCKQ8TEA7 893 aa23.31■■□□□ 1.32
ZNF554-203ENST00000590116 MMTAG2Q9BU76 263 aaKnown RBP23.31■■□□□ 1.32
ZNF554-203ENST00000590116 C6orf50Q9HD87 102 aa23.31■■□□□ 1.32
ZNF554-203ENST00000590116 LEMD3Q9Y2U8 911 aa23.31■■□□□ 1.32
ZNF554-203ENST00000590116 RTCBQ9Y3I0 505 aaKnown RBP23.31■■□□□ 1.32
ZNF554-203ENST00000590116 BICDL2A1A5D9 508 aa23.3■■□□□ 1.32
ZNF554-203ENST00000590116 GPS2Q13227 327 aa23.3■■□□□ 1.32
ZNF554-203ENST00000590116 MEA1Q16626 185 aa23.3■■□□□ 1.32
ZNF554-203ENST00000590116 ZNF804AQ7Z570 1209 aa23.3■■□□□ 1.32
ZNF554-203ENST00000590116 NEK8Q86SG6 692 aa23.3■■□□□ 1.32
ZNF554-203ENST00000590116 KIAA0895Q8NCT3 520 aa23.3■■□□□ 1.32
ZNF554-203ENST00000590116 JAKMIP2Q96AA8 810 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms