RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 KATNBL1Q9H079 304 aa21.16■□□□□ 0.98
PRKCSH-211ENST00000590098 ZMYM6O95789 1325 aa21.15■□□□□ 0.98
PRKCSH-211ENST00000590098 EPHB4P54760 987 aa21.15■□□□□ 0.98
PRKCSH-211ENST00000590098 MUM1L1Q5H9M0 696 aa21.15■□□□□ 0.98
PRKCSH-211ENST00000590098 ZNF589Q86UQ0 364 aaPredicted RBP21.15■□□□□ 0.98
PRKCSH-211ENST00000590098 SMC5Q8IY18 1101 aa21.15■□□□□ 0.98
PRKCSH-211ENST00000590098 TMEM47Q9BQJ4 181 aa21.15■□□□□ 0.98
PRKCSH-211ENST00000590098 TCP11L1Q9NUJ3 509 aa21.15■□□□□ 0.98
PRKCSH-211ENST00000590098 CYP39A1Q9NYL5 469 aa21.15■□□□□ 0.98
PRKCSH-211ENST00000590098 ICAM1P05362 532 aa21.14■□□□□ 0.97
PRKCSH-211ENST00000590098 SLC16A2P36021 539 aa21.14■□□□□ 0.97
PRKCSH-211ENST00000590098 HAND2P61296 217 aa21.14■□□□□ 0.97
PRKCSH-211ENST00000590098 FPGSQ05932 587 aa21.14■□□□□ 0.97
PRKCSH-211ENST00000590098 NSMFQ6X4W1 530 aa21.14■□□□□ 0.97
PRKCSH-211ENST00000590098 MFSD6Q6ZSS7 791 aa21.14■□□□□ 0.97
PRKCSH-211ENST00000590098 RANBP17Q9H2T7 1088 aaKnown RBP21.14■□□□□ 0.97
PRKCSH-211ENST00000590098 A0A0U1RQG5 324 aaPredicted RBP21.13■□□□□ 0.97
PRKCSH-211ENST00000590098 PCP11498 1178 aaKnown RBP21.13■□□□□ 0.97
PRKCSH-211ENST00000590098 SMAD3P84022 425 aaKnown RBP21.13■□□□□ 0.97
PRKCSH-211ENST00000590098 AKNAD1Q5T1N1 836 aa21.13■□□□□ 0.97
PRKCSH-211ENST00000590098 SYDE2Q5VT97 1194 aa21.13■□□□□ 0.97
PRKCSH-211ENST00000590098 TTBK2Q6IQ55 1244 aa21.13■□□□□ 0.97
PRKCSH-211ENST00000590098 BTNL9Q6UXG8 535 aa21.13■□□□□ 0.97
PRKCSH-211ENST00000590098 CHD1LQ86WJ1 897 aa21.13■□□□□ 0.97
PRKCSH-211ENST00000590098 RNPC3Q96LT9 517 aaKnown RBP21.13■□□□□ 0.97
PRKCSH-211ENST00000590098 AP5M1Q9H0R1 490 aa21.13■□□□□ 0.97
PRKCSH-211ENST00000590098 GPCPD1Q9NPB8 672 aa21.13■□□□□ 0.97
PRKCSH-211ENST00000590098 DDX49Q9Y6V7 483 aaKnown RBP21.13■□□□□ 0.97
PRKCSH-211ENST00000590098 FRMPD2Q68DX3 1309 aaPredicted RBP21.12■□□□□ 0.97
PRKCSH-211ENST00000590098 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.12■□□□□ 0.97
PRKCSH-211ENST00000590098 TIMP1P01033 207 aa21.12■□□□□ 0.97
PRKCSH-211ENST00000590098 SDSP20132 328 aa21.12■□□□□ 0.97
PRKCSH-211ENST00000590098 CDK7P50613 346 aa21.12■□□□□ 0.97
PRKCSH-211ENST00000590098 TTC14Q96N46 770 aa21.12■□□□□ 0.97
PRKCSH-211ENST00000590098 RNF41Q9H4P4 317 aaPredicted RBP21.12■□□□□ 0.97
PRKCSH-211ENST00000590098 ARVCFO00192 962 aa21.11■□□□□ 0.97
PRKCSH-211ENST00000590098 TLR3O15455 904 aaKnown RBP21.11■□□□□ 0.97
PRKCSH-211ENST00000590098 NKX3-2P78367 333 aa21.11■□□□□ 0.97
PRKCSH-211ENST00000590098 BEX3Q00994 111 aa21.11■□□□□ 0.97
PRKCSH-211ENST00000590098 TLK2Q86UE8 772 aa21.11■□□□□ 0.97
PRKCSH-211ENST00000590098 ADD3Q9UEY8 706 aaKnown RBP21.11■□□□□ 0.97
PRKCSH-211ENST00000590098 PNMA2Q9UL42 364 aa21.11■□□□□ 0.97
PRKCSH-211ENST00000590098 CUL9Q8IWT3 2517 aa21.11■□□□□ 0.97
PRKCSH-211ENST00000590098 ASTN1O14525 1302 aa21.1■□□□□ 0.97
PRKCSH-211ENST00000590098 CTAGE5O15320 804 aa21.1■□□□□ 0.97
PRKCSH-211ENST00000590098 ZEB2O60315 1214 aa21.1■□□□□ 0.97
PRKCSH-211ENST00000590098 PDHBP11177 359 aa21.1■□□□□ 0.97
PRKCSH-211ENST00000590098 NUCB1Q02818 461 aa21.1■□□□□ 0.97
PRKCSH-211ENST00000590098 BAATQ14032 418 aaPredicted RBP21.1■□□□□ 0.97
PRKCSH-211ENST00000590098 IQSEC1Q6DN90 963 aa21.1■□□□□ 0.97
PRKCSH-211ENST00000590098 EEPD1Q7L9B9 569 aa21.1■□□□□ 0.97
PRKCSH-211ENST00000590098 PLEKHM2Q8IWE5 1019 aa21.1■□□□□ 0.97
PRKCSH-211ENST00000590098 ESR2Q92731 530 aa21.1■□□□□ 0.97
PRKCSH-211ENST00000590098 VTA1Q9NP79 307 aa21.1■□□□□ 0.97
PRKCSH-211ENST00000590098 TBX21Q9UL17 535 aa21.1■□□□□ 0.97
PRKCSH-211ENST00000590098 GNEQ9Y223 722 aaKnown RBP21.1■□□□□ 0.97
PRKCSH-211ENST00000590098 LRRC37A2A6NM11 1700 aa21.09■□□□□ 0.97
PRKCSH-211ENST00000590098 ZNF213O14771 459 aa21.09■□□□□ 0.97
PRKCSH-211ENST00000590098 DYNC1LI2O43237 492 aaPredicted RBP21.09■□□□□ 0.97
PRKCSH-211ENST00000590098 CABYRO75952 493 aa21.09■□□□□ 0.97
PRKCSH-211ENST00000590098 IGHDP01880 384 aa21.09■□□□□ 0.97
PRKCSH-211ENST00000590098 PTGS1P23219 599 aa21.09■□□□□ 0.97
PRKCSH-211ENST00000590098 FSCN1Q16658 493 aaKnown RBP21.09■□□□□ 0.97
PRKCSH-211ENST00000590098 MFSD5Q6N075 450 aa21.09■□□□□ 0.97
PRKCSH-211ENST00000590098 FBXO16Q8IX29 292 aaPredicted RBP21.09■□□□□ 0.97
PRKCSH-211ENST00000590098 SEMA6BQ9H3T3 888 aa21.09■□□□□ 0.97
PRKCSH-211ENST00000590098 OSBPL3Q9H4L5 887 aa21.09■□□□□ 0.97
PRKCSH-211ENST00000590098 PDGFCQ9NRA1 345 aa21.09■□□□□ 0.97
PRKCSH-211ENST00000590098 DIAPH3Q9NSV4 1193 aa21.09■□□□□ 0.97
PRKCSH-211ENST00000590098 LCTP09848 1927 aa21.09■□□□□ 0.97
PRKCSH-211ENST00000590098 PTPDC1A2A3K4 754 aa21.08■□□□□ 0.97
PRKCSH-211ENST00000590098 HIP1O00291 1037 aa21.08■□□□□ 0.97
PRKCSH-211ENST00000590098 SMPD1P17405 629 aa21.08■□□□□ 0.97
PRKCSH-211ENST00000590098 TAPT1Q6NXT6 567 aa21.08■□□□□ 0.97
PRKCSH-211ENST00000590098 CWC27Q6UX04 472 aaKnown RBP21.08■□□□□ 0.97
PRKCSH-211ENST00000590098 CXCL17Q6UXB2 119 aa21.08■□□□□ 0.97
PRKCSH-211ENST00000590098 KIAA1211Q6ZU35 1233 aa21.08■□□□□ 0.97
PRKCSH-211ENST00000590098 TBC1D10CQ8IV04 446 aa21.08■□□□□ 0.97
PRKCSH-211ENST00000590098 PURBQ96QR8 312 aaKnown RBP21.08■□□□□ 0.97
PRKCSH-211ENST00000590098 TTYH1Q9H313 450 aaPredicted RBP21.08■□□□□ 0.97
PRKCSH-211ENST00000590098 Q9Y3F1 56 aa21.08■□□□□ 0.97
PRKCSH-211ENST00000590098 UNC80Q8N2C7 3258 aa21.07■□□□□ 0.96
PRKCSH-211ENST00000590098 NFIBO00712 420 aa21.07■□□□□ 0.96
PRKCSH-211ENST00000590098 NT5C2P49902 561 aa21.07■□□□□ 0.96
PRKCSH-211ENST00000590098 ZNF543Q08ER8 600 aa21.07■□□□□ 0.96
PRKCSH-211ENST00000590098 PPIGQ13427 754 aaKnown RBP eCLIP21.07■□□□□ 0.965e-13■□□□□ 10
PRKCSH-211ENST00000590098 TMEM63BQ5T3F8 832 aa21.07■□□□□ 0.96
PRKCSH-211ENST00000590098 FAM126BQ8IXS8 530 aa21.07■□□□□ 0.96
PRKCSH-211ENST00000590098 TMEM199Q8N511 208 aa21.07■□□□□ 0.96
PRKCSH-211ENST00000590098 MORC4Q8TE76 937 aa21.07■□□□□ 0.96
PRKCSH-211ENST00000590098 CDX2Q99626 313 aaPredicted RBP21.07■□□□□ 0.96
PRKCSH-211ENST00000590098 LOC102724159A0A0B4J2E5 919 aa21.06■□□□□ 0.96
PRKCSH-211ENST00000590098 CALML3P27482 149 aa21.06■□□□□ 0.96
PRKCSH-211ENST00000590098 ALDH5A1P51649 535 aaPredicted RBP21.06■□□□□ 0.96
PRKCSH-211ENST00000590098 PWP2Q15269 919 aaKnown RBP21.06■□□□□ 0.96
PRKCSH-211ENST00000590098 CCDC178Q5BJE1 867 aa21.06■□□□□ 0.96
PRKCSH-211ENST00000590098 EXOC6Q8TAG9 804 aa21.06■□□□□ 0.96
PRKCSH-211ENST00000590098 ZKSCAN3Q9BRR0 538 aa21.06■□□□□ 0.96
PRKCSH-211ENST00000590098 LAMA4Q16363 1823 aa21.06■□□□□ 0.96
PRKCSH-211ENST00000590098 NEDD4P46934 1319 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms