RNA–Protein interactions for RNA: ENST00000590035.5

RETREG3-209, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-209ENST00000590035 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.33□□□□□ -0.44
RETREG3-209ENST00000590035 TIMP1P01033 207 aa12.33□□□□□ -0.44
RETREG3-209ENST00000590035 CD4P01730 458 aa12.33□□□□□ -0.44
RETREG3-209ENST00000590035 FGAP02671 866 aa12.33□□□□□ -0.44
RETREG3-209ENST00000590035 MUM1L1Q5H9M0 696 aa12.33□□□□□ -0.44
RETREG3-209ENST00000590035 ZNF697Q5TEC3 545 aa12.33□□□□□ -0.44
RETREG3-209ENST00000590035 TAPT1Q6NXT6 567 aa12.33□□□□□ -0.44
RETREG3-209ENST00000590035 KCTD1Q719H9 257 aa12.33□□□□□ -0.44
RETREG3-209ENST00000590035 FAM126BQ8IXS8 530 aa12.33□□□□□ -0.44
RETREG3-209ENST00000590035 PCSK9Q8NBP7 692 aaKnown RBP12.33□□□□□ -0.44
RETREG3-209ENST00000590035 FAM227BQ96M60 508 aa12.33□□□□□ -0.44
RETREG3-209ENST00000590035 CRBNQ96SW2 442 aa12.33□□□□□ -0.44
RETREG3-209ENST00000590035 CDX2Q99626 313 aaPredicted RBP12.33□□□□□ -0.44
RETREG3-209ENST00000590035 CYP39A1Q9NYL5 469 aa12.33□□□□□ -0.44
RETREG3-209ENST00000590035 A0A0U1RQG5 324 aaPredicted RBP12.32□□□□□ -0.44
RETREG3-209ENST00000590035 TSPY2A6NKD2 308 aa12.32□□□□□ -0.44
RETREG3-209ENST00000590035 DCDC2CA8MYV0 355 aa12.32□□□□□ -0.44
RETREG3-209ENST00000590035 ARVCFO00192 962 aa12.32□□□□□ -0.44
RETREG3-209ENST00000590035 ICAM1P05362 532 aa12.32□□□□□ -0.44
RETREG3-209ENST00000590035 C6orf222P0C671 652 aaPredicted RBP12.32□□□□□ -0.44
RETREG3-209ENST00000590035 SNHG28P0DPA3 235 aa12.32□□□□□ -0.44
RETREG3-209ENST00000590035 RAG1P15918 1043 aa12.32□□□□□ -0.44
RETREG3-209ENST00000590035 FPGSQ05932 587 aa12.32□□□□□ -0.44
RETREG3-209ENST00000590035 MFSD5Q6N075 450 aa12.32□□□□□ -0.44
RETREG3-209ENST00000590035 ZNF589Q86UQ0 364 aaPredicted RBP12.32□□□□□ -0.44
RETREG3-209ENST00000590035 SMC5Q8IY18 1101 aa12.32□□□□□ -0.44
RETREG3-209ENST00000590035 DCAF4Q8WV16 495 aa12.32□□□□□ -0.44
RETREG3-209ENST00000590035 GLT1D1Q96MS3 346 aa12.32□□□□□ -0.44
RETREG3-209ENST00000590035 TRERF1Q96PN7 1200 aa12.32□□□□□ -0.44
RETREG3-209ENST00000590035 HOMER2Q9NSB8 354 aa12.32□□□□□ -0.44
RETREG3-209ENST00000590035 TMEM39AQ9NV64 488 aa12.32□□□□□ -0.44
RETREG3-209ENST00000590035 STX8Q9UNK0 236 aa12.32□□□□□ -0.44
RETREG3-209ENST00000590035 DDX49Q9Y6V7 483 aaKnown RBP12.32□□□□□ -0.44
RETREG3-209ENST00000590035 GRIN2DO15399 1336 aa12.32□□□□□ -0.44
RETREG3-209ENST00000590035 MROH7Q68CQ1 1323 aa12.32□□□□□ -0.44
RETREG3-209ENST00000590035 LOC102724159A0A0B4J2E5 919 aa12.31□□□□□ -0.44
RETREG3-209ENST00000590035 ASB14A6NK59 587 aa12.31□□□□□ -0.44
RETREG3-209ENST00000590035 HSPD1P10809 573 aaKnown RBP12.31□□□□□ -0.44
RETREG3-209ENST00000590035 SMPD1P17405 629 aa12.31□□□□□ -0.44
RETREG3-209ENST00000590035 PTGS1P23219 599 aa12.31□□□□□ -0.44
RETREG3-209ENST00000590035 PWP2Q15269 919 aaKnown RBP12.31□□□□□ -0.44
RETREG3-209ENST00000590035 MCMDC2Q4G0Z9 681 aa12.31□□□□□ -0.44
RETREG3-209ENST00000590035 ANKRD45Q5TZF3 282 aa12.31□□□□□ -0.44
RETREG3-209ENST00000590035 TTBK2Q6IQ55 1244 aa12.31□□□□□ -0.44
RETREG3-209ENST00000590035 VWCEQ96DN2 955 aa12.31□□□□□ -0.44
RETREG3-209ENST00000590035 RNPC3Q96LT9 517 aaKnown RBP12.31□□□□□ -0.44
RETREG3-209ENST00000590035 FAM161BQ96MY7 647 aa12.31□□□□□ -0.44
RETREG3-209ENST00000590035 TMEM47Q9BQJ4 181 aa12.31□□□□□ -0.44
RETREG3-209ENST00000590035 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.31□□□□□ -0.44
RETREG3-209ENST00000590035 Q9Y3F1 56 aa12.31□□□□□ -0.44
RETREG3-209ENST00000590035 CTDP1Q9Y5B0 961 aaPredicted RBP12.31□□□□□ -0.44
RETREG3-209ENST00000590035 LAMA4Q16363 1823 aa12.31□□□□□ -0.44
RETREG3-209ENST00000590035 NCOR1O75376 2440 aa12.3□□□□□ -0.44
RETREG3-209ENST00000590035 RBM47A0AV96 593 aaKnown RBP12.3□□□□□ -0.44
RETREG3-209ENST00000590035 SLC4A3P48751 1232 aa12.3□□□□□ -0.44
RETREG3-209ENST00000590035 SNAP25P60880 206 aa12.3□□□□□ -0.44
RETREG3-209ENST00000590035 TNFAIP2Q03169 654 aa12.3□□□□□ -0.44
RETREG3-209ENST00000590035 GNASQ5JWF2 1037 aa12.3□□□□□ -0.44
RETREG3-209ENST00000590035 TMEM240Q5SV17 173 aa12.3□□□□□ -0.44
RETREG3-209ENST00000590035 TMEM63BQ5T3F8 832 aa12.3□□□□□ -0.44
RETREG3-209ENST00000590035 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.3□□□□□ -0.44
RETREG3-209ENST00000590035 CLEC4DQ8WXI8 215 aa12.3□□□□□ -0.44
RETREG3-209ENST00000590035 OSBPL3Q9H4L5 887 aa12.3□□□□□ -0.44
RETREG3-209ENST00000590035 SPC25Q9HBM1 224 aa12.3□□□□□ -0.44
RETREG3-209ENST00000590035 PDGFCQ9NRA1 345 aa12.3□□□□□ -0.44
RETREG3-209ENST00000590035 BDP1A6H8Y1 2624 aa12.3□□□□□ -0.44
RETREG3-209ENST00000590035 SCN10AQ9Y5Y9 1956 aa12.3□□□□□ -0.44
RETREG3-209ENST00000590035 RANBP6O60518 1105 aaKnown RBP12.29□□□□□ -0.44
RETREG3-209ENST00000590035 CABYRO75952 493 aa12.29□□□□□ -0.44
RETREG3-209ENST00000590035 PDHBP11177 359 aa12.29□□□□□ -0.44
RETREG3-209ENST00000590035 TOP1P11387 765 aaKnown RBP12.29□□□□□ -0.44
RETREG3-209ENST00000590035 ALAS1P13196 640 aa12.29□□□□□ -0.44
RETREG3-209ENST00000590035 EDNRBP24530 442 aa12.29□□□□□ -0.44
RETREG3-209ENST00000590035 BEX3Q00994 111 aa12.29□□□□□ -0.44
RETREG3-209ENST00000590035 NMIQ13287 307 aaPredicted RBP12.29□□□□□ -0.44
RETREG3-209ENST00000590035 CCDC174Q6PII3 467 aa12.29□□□□□ -0.44
RETREG3-209ENST00000590035 TLK2Q86UE8 772 aa12.29□□□□□ -0.44
RETREG3-209ENST00000590035 TBC1D10CQ8IV04 446 aa12.29□□□□□ -0.44
RETREG3-209ENST00000590035 PURBQ96QR8 312 aaKnown RBP12.29□□□□□ -0.44
RETREG3-209ENST00000590035 COL25A1Q9BXS0 654 aaPredicted RBP12.29□□□□□ -0.44
RETREG3-209ENST00000590035 SEZ6LQ9BYH1 1024 aa12.29□□□□□ -0.44
RETREG3-209ENST00000590035 VTA1Q9NP79 307 aa12.29□□□□□ -0.44
RETREG3-209ENST00000590035 CCDC171Q6TFL3 1326 aa12.29□□□□□ -0.44
RETREG3-209ENST00000590035 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.28□□□□□ -0.44
RETREG3-209ENST00000590035 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.28□□□□□ -0.44
RETREG3-209ENST00000590035 NFIBO00712 420 aa12.28□□□□□ -0.44
RETREG3-209ENST00000590035 PCP11498 1178 aaKnown RBP12.28□□□□□ -0.44
RETREG3-209ENST00000590035 CSF2RAP15509 400 aa12.28□□□□□ -0.44
RETREG3-209ENST00000590035 DNAJB2P25686 324 aa12.28□□□□□ -0.44
RETREG3-209ENST00000590035 SLC16A2P36021 539 aa12.28□□□□□ -0.44
RETREG3-209ENST00000590035 ZNF543Q08ER8 600 aa12.28□□□□□ -0.44
RETREG3-209ENST00000590035 PPIGQ13427 754 aaKnown RBP eCLIP12.28□□□□□ -0.441e-12■□□□□ 8.7
RETREG3-209ENST00000590035 AAMPQ13685 434 aa12.28□□□□□ -0.44
RETREG3-209ENST00000590035 FSCN1Q16658 493 aaKnown RBP12.28□□□□□ -0.44
RETREG3-209ENST00000590035 DUSP28Q4G0W2 176 aa12.28□□□□□ -0.44
RETREG3-209ENST00000590035 SYDE2Q5VT97 1194 aa12.28□□□□□ -0.44
RETREG3-209ENST00000590035 IQSEC1Q6DN90 963 aa12.28□□□□□ -0.44
RETREG3-209ENST00000590035 CXCL17Q6UXB2 119 aa12.28□□□□□ -0.44
RETREG3-209ENST00000590035 FBXO16Q8IX29 292 aaPredicted RBP12.28□□□□□ -0.44
RETREG3-209ENST00000590035 MYLIPQ8WY64 445 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 177.4 ms