RNA–Protein interactions for RNA: ENST00000589706.1

SMAD4-208, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-208ENST00000589706 FANCGO15287 622 aa7.22□□□□□ -1.25
SMAD4-208ENST00000589706 FAM153BP0C7A2 387 aa7.22□□□□□ -1.25
SMAD4-208ENST00000589706 NID1P14543 1247 aa7.22□□□□□ -1.25
SMAD4-208ENST00000589706 YARSP54577 528 aaKnown RBP7.22□□□□□ -1.25
SMAD4-208ENST00000589706 ID3Q02535 119 aa7.22□□□□□ -1.25
SMAD4-208ENST00000589706 GNPTABQ3T906 1256 aa7.22□□□□□ -1.25
SMAD4-208ENST00000589706 ZBTB37Q5TC79 503 aa7.22□□□□□ -1.25
SMAD4-208ENST00000589706 KLHL6Q8WZ60 621 aa7.22□□□□□ -1.25
SMAD4-208ENST00000589706 TOPAZ1Q8N9V7 1692 aa7.22□□□□□ -1.25
SMAD4-208ENST00000589706 CRB1P82279 1406 aa7.21□□□□□ -1.25
SMAD4-208ENST00000589706 LRRC37A3O60309 1634 aa7.21□□□□□ -1.26
SMAD4-208ENST00000589706 PHRF1Q9P1Y6 1649 aaKnown RBP7.21□□□□□ -1.26
SMAD4-208ENST00000589706 IQCA1LA6NCM1 817 aa7.21□□□□□ -1.26
SMAD4-208ENST00000589706 TCERG1O14776 1098 aaKnown RBP7.21□□□□□ -1.26
SMAD4-208ENST00000589706 TMPRSS2O15393 492 aa7.21□□□□□ -1.26
SMAD4-208ENST00000589706 ANP32CO43423 234 aa7.21□□□□□ -1.26
SMAD4-208ENST00000589706 OIP5O43482 229 aa7.21□□□□□ -1.26
SMAD4-208ENST00000589706 ASMTLO95671 621 aa7.21□□□□□ -1.26
SMAD4-208ENST00000589706 HSPA1AP0DMV8 641 aaKnown RBP7.21□□□□□ -1.26
SMAD4-208ENST00000589706 HSPA1BP0DMV9 641 aaKnown RBP7.21□□□□□ -1.26
SMAD4-208ENST00000589706 CCNFP41002 786 aa7.21□□□□□ -1.26
SMAD4-208ENST00000589706 TNNT2P45379 298 aaPredicted RBP7.21□□□□□ -1.26
SMAD4-208ENST00000589706 MASP1P48740 699 aa7.21□□□□□ -1.26
SMAD4-208ENST00000589706 RGS3P49796 1198 aa7.21□□□□□ -1.26
SMAD4-208ENST00000589706 COL9A3Q14050 684 aaPredicted RBP7.21□□□□□ -1.26
SMAD4-208ENST00000589706 LONRF2Q1L5Z9 754 aa7.21□□□□□ -1.26
SMAD4-208ENST00000589706 SLC10A6Q3KNW5 377 aa7.21□□□□□ -1.26
SMAD4-208ENST00000589706 SLC6A19Q695T7 634 aa7.21□□□□□ -1.26
SMAD4-208ENST00000589706 SLFN12Q8IYM2 578 aa7.21□□□□□ -1.26
SMAD4-208ENST00000589706 LRRC47Q8N1G4 583 aaKnown RBP7.21□□□□□ -1.26
SMAD4-208ENST00000589706 ZNF507Q8TCN5 953 aa7.21□□□□□ -1.26
SMAD4-208ENST00000589706 DCAF11Q8TEB1 546 aa7.21□□□□□ -1.26
SMAD4-208ENST00000589706 TMEM87BQ96K49 555 aa7.21□□□□□ -1.26
SMAD4-208ENST00000589706 RRAGDQ9NQL2 400 aaPredicted RBP7.21□□□□□ -1.26
SMAD4-208ENST00000589706 TJP2Q9UDY2 1190 aa7.21□□□□□ -1.26
SMAD4-208ENST00000589706 PPP1R9AQ9ULJ8 1098 aa7.21□□□□□ -1.26
SMAD4-208ENST00000589706 ROCK1Q13464 1354 aa7.2□□□□□ -1.26
SMAD4-208ENST00000589706 PAPPAQ13219 1627 aa7.2□□□□□ -1.26
SMAD4-208ENST00000589706 LMO7Q8WWI1 1683 aa7.2□□□□□ -1.26
SMAD4-208ENST00000589706 SHISA8B8ZZ34 492 aa7.2□□□□□ -1.26
SMAD4-208ENST00000589706 DEAF1O75398 565 aaPredicted RBP7.2□□□□□ -1.26
SMAD4-208ENST00000589706 AMPD1P23109 780 aa7.2□□□□□ -1.26
SMAD4-208ENST00000589706 POLR2BP30876 1174 aaKnown RBP7.2□□□□□ -1.26
SMAD4-208ENST00000589706 KRT76Q01546 638 aa7.2□□□□□ -1.26
SMAD4-208ENST00000589706 NFKBIBQ15653 356 aa7.2□□□□□ -1.26
SMAD4-208ENST00000589706 BBS9Q3SYG4 887 aa7.2□□□□□ -1.26
SMAD4-208ENST00000589706 TMEM67Q5HYA8 995 aa7.2□□□□□ -1.26
SMAD4-208ENST00000589706 HID1Q8IV36 788 aa7.2□□□□□ -1.26
SMAD4-208ENST00000589706 MRPL41Q8IXM3 137 aaKnown RBP7.2□□□□□ -1.26
SMAD4-208ENST00000589706 PHACTR4Q8IZ21 702 aa7.2□□□□□ -1.26
SMAD4-208ENST00000589706 DTWD1Q8N5C7 304 aa7.2□□□□□ -1.26
SMAD4-208ENST00000589706 ZBTB38Q8NAP3 1195 aaPredicted RBP7.2□□□□□ -1.26
SMAD4-208ENST00000589706 RNF214Q8ND24 703 aa7.2□□□□□ -1.26
SMAD4-208ENST00000589706 UBASH3BQ8TF42 649 aa7.2□□□□□ -1.26
SMAD4-208ENST00000589706 DHRS1Q96LJ7 313 aa7.2□□□□□ -1.26
SMAD4-208ENST00000589706 PRAM1Q96QH2 718 aa7.2□□□□□ -1.26
SMAD4-208ENST00000589706 CHMP4BQ9H444 224 aaKnown RBP7.2□□□□□ -1.26
SMAD4-208ENST00000589706 CWC22Q9HCG8 908 aaKnown RBP7.2□□□□□ -1.26
SMAD4-208ENST00000589706 LRRC4BQ9NT99 713 aa7.2□□□□□ -1.26
SMAD4-208ENST00000589706 CRIM1Q9NZV1 1036 aa7.2□□□□□ -1.26
SMAD4-208ENST00000589706 PNPLA7Q6ZV29 1317 aa7.2□□□□□ -1.26
SMAD4-208ENST00000589706 COL5A2P05997 1499 aaPredicted RBP7.19□□□□□ -1.26
SMAD4-208ENST00000589706 ARHGEF28Q8N1W1 1705 aaKnown RBP7.19□□□□□ -1.26
SMAD4-208ENST00000589706 RGS13O14921 159 aa7.19□□□□□ -1.26
SMAD4-208ENST00000589706 ADCY3O60266 1144 aa7.19□□□□□ -1.26
SMAD4-208ENST00000589706 KIF20AO95235 890 aa7.19□□□□□ -1.26
SMAD4-208ENST00000589706 PMS1P54277 932 aaKnown RBP7.19□□□□□ -1.26
SMAD4-208ENST00000589706 AMPD3Q01432 767 aa7.19□□□□□ -1.26
SMAD4-208ENST00000589706 DUOXA2Q1HG44 320 aa7.19□□□□□ -1.26
SMAD4-208ENST00000589706 DALRD3Q5D0E6 543 aaKnown RBP7.19□□□□□ -1.26
SMAD4-208ENST00000589706 ZC3H12BQ5HYM0 836 aaKnown RBP7.19□□□□□ -1.26
SMAD4-208ENST00000589706 AKAP4Q5JQC9 854 aa7.19□□□□□ -1.26
SMAD4-208ENST00000589706 SGSM3Q96HU1 749 aa7.19□□□□□ -1.26
SMAD4-208ENST00000589706 FANCD2OSQ96PS1 177 aa7.19□□□□□ -1.26
SMAD4-208ENST00000589706 KIF2CQ99661 725 aa7.19□□□□□ -1.26
SMAD4-208ENST00000589706 POGKQ9P215 609 aa7.19□□□□□ -1.26
SMAD4-208ENST00000589706 CD2APQ9Y5K6 639 aa7.19□□□□□ -1.26
SMAD4-208ENST00000589706 ERBB4Q15303 1308 aa7.19□□□□□ -1.26
SMAD4-208ENST00000589706 CPDO75976 1380 aa7.19□□□□□ -1.26
SMAD4-208ENST00000589706 ANKRD30BQ9BXX2 1392 aa7.19□□□□□ -1.26
SMAD4-208ENST00000589706 AKAP12Q02952 1782 aa7.18□□□□□ -1.26
SMAD4-208ENST00000589706 PCNTO95613 3336 aa7.18□□□□□ -1.26
SMAD4-208ENST00000589706 AGRPO00253 132 aa7.18□□□□□ -1.26
SMAD4-208ENST00000589706 EXOC5O00471 708 aa7.18□□□□□ -1.26
SMAD4-208ENST00000589706 BCRP11274 1271 aa7.18□□□□□ -1.26
SMAD4-208ENST00000589706 NTF4P34130 210 aa7.18□□□□□ -1.26
SMAD4-208ENST00000589706 ZNF143P52747 638 aaPredicted RBP7.18□□□□□ -1.26
SMAD4-208ENST00000589706 RGL3Q3MIN7 710 aa7.18□□□□□ -1.26
SMAD4-208ENST00000589706 TRAPPC3LQ5T215 181 aa7.18□□□□□ -1.26
SMAD4-208ENST00000589706 TOM1L2Q6ZVM7 507 aa7.18□□□□□ -1.26
SMAD4-208ENST00000589706 TMEM192Q8IY95 271 aa7.18□□□□□ -1.26
SMAD4-208ENST00000589706 CCDC74BQ96LY2 380 aa7.18□□□□□ -1.26
SMAD4-208ENST00000589706 SLC6A18Q96N87 628 aa7.18□□□□□ -1.26
SMAD4-208ENST00000589706 RUSC1Q9BVN2 902 aa7.18□□□□□ -1.26
SMAD4-208ENST00000589706 TMPRSS13Q9BYE2 586 aa7.18□□□□□ -1.26
SMAD4-208ENST00000589706 ATXN3LQ9H3M9 355 aa7.18□□□□□ -1.26
SMAD4-208ENST00000589706 FBRSQ9HAH7 460 aa7.18□□□□□ -1.26
SMAD4-208ENST00000589706 METTL14Q9HCE5 456 aaKnown RBP7.18□□□□□ -1.26
SMAD4-208ENST00000589706 NMRK2Q9NPI5 230 aa7.18□□□□□ -1.26
SMAD4-208ENST00000589706 DISC1Q9NRI5 854 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms