RNA–Protein interactions for RNA: ENST00000589541.5

MBD1-218, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-218ENST00000589541 ORC4O43929 436 aa13.95□□□□□ -0.18
MBD1-218ENST00000589541 RRP12Q5JTH9 1297 aaKnown RBP13.95□□□□□ -0.18
MBD1-218ENST00000589541 NSMFQ6X4W1 530 aa13.95□□□□□ -0.18
MBD1-218ENST00000589541 CYP39A1Q9NYL5 469 aa13.95□□□□□ -0.18
MBD1-218ENST00000589541 CCPG1Q9ULG6 757 aa13.95□□□□□ -0.18
MBD1-218ENST00000589541 MCM3APO60318 1980 aa13.94□□□□□ -0.18
MBD1-218ENST00000589541 FGAP02671 866 aa13.94□□□□□ -0.18
MBD1-218ENST00000589541 PTGS1P23219 599 aa13.94□□□□□ -0.18
MBD1-218ENST00000589541 SLC16A2P36021 539 aa13.94□□□□□ -0.18
MBD1-218ENST00000589541 HDAC1Q13547 482 aaPredicted RBP13.94□□□□□ -0.18
MBD1-218ENST00000589541 ALX1Q15699 326 aa13.94□□□□□ -0.18
MBD1-218ENST00000589541 MCMDC2Q4G0Z9 681 aa13.94□□□□□ -0.18
MBD1-218ENST00000589541 TTBK2Q6IQ55 1244 aa13.94□□□□□ -0.18
MBD1-218ENST00000589541 MFSD5Q6N075 450 aa13.94□□□□□ -0.18
MBD1-218ENST00000589541 CXCL17Q6UXB2 119 aa13.94□□□□□ -0.18
MBD1-218ENST00000589541 EEPD1Q7L9B9 569 aa13.94□□□□□ -0.18
MBD1-218ENST00000589541 TLK2Q86UE8 772 aa13.94□□□□□ -0.18
MBD1-218ENST00000589541 MAFAQ8NHW3 353 aaPredicted RBP13.94□□□□□ -0.18
MBD1-218ENST00000589541 PRUNE2Q8WUY3 3088 aa13.94□□□□□ -0.18
MBD1-218ENST00000589541 DCAF4Q8WV16 495 aa13.94□□□□□ -0.18
MBD1-218ENST00000589541 MYLIPQ8WY64 445 aa13.94□□□□□ -0.18
MBD1-218ENST00000589541 PURBQ96QR8 312 aaKnown RBP13.94□□□□□ -0.18
MBD1-218ENST00000589541 ICAM1P05362 532 aa13.93□□□□□ -0.18
MBD1-218ENST00000589541 FGRP09769 529 aa13.93□□□□□ -0.18
MBD1-218ENST00000589541 SMPD1P17405 629 aa13.93□□□□□ -0.18
MBD1-218ENST00000589541 NOVP48745 357 aa13.93□□□□□ -0.18
MBD1-218ENST00000589541 HAND2P61296 217 aa13.93□□□□□ -0.18
MBD1-218ENST00000589541 NKX3-2P78367 333 aa13.93□□□□□ -0.18
MBD1-218ENST00000589541 FSCN1Q16658 493 aaKnown RBP13.93□□□□□ -0.18
MBD1-218ENST00000589541 ZNF589Q86UQ0 364 aaPredicted RBP13.93□□□□□ -0.18
MBD1-218ENST00000589541 FBXO16Q8IX29 292 aaPredicted RBP13.93□□□□□ -0.18
MBD1-218ENST00000589541 FAM126BQ8IXS8 530 aa13.93□□□□□ -0.18
MBD1-218ENST00000589541 TMEM47Q9BQJ4 181 aa13.93□□□□□ -0.18
MBD1-218ENST00000589541 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.93□□□□□ -0.181e-7■■□□□ 13.5
MBD1-218ENST00000589541 PPP1R12CQ9BZL4 782 aa13.93□□□□□ -0.18
MBD1-218ENST00000589541 AP5M1Q9H0R1 490 aa13.93□□□□□ -0.18
MBD1-218ENST00000589541 GPCPD1Q9NPB8 672 aa13.93□□□□□ -0.18
MBD1-218ENST00000589541 PDGFCQ9NRA1 345 aa13.93□□□□□ -0.18
MBD1-218ENST00000589541 GNEQ9Y223 722 aaKnown RBP13.93□□□□□ -0.18
MBD1-218ENST00000589541 FRMPD2Q68DX3 1309 aaPredicted RBP13.92□□□□□ -0.18
MBD1-218ENST00000589541 VCANP13611 3396 aa13.92□□□□□ -0.18
MBD1-218ENST00000589541 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.92□□□□□ -0.18
MBD1-218ENST00000589541 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.92□□□□□ -0.18
MBD1-218ENST00000589541 TLR3O15455 904 aaKnown RBP13.92□□□□□ -0.18
MBD1-218ENST00000589541 DYNC1LI2O43237 492 aaPredicted RBP13.92□□□□□ -0.18
MBD1-218ENST00000589541 HSPD1P10809 573 aaKnown RBP13.92□□□□□ -0.18
MBD1-218ENST00000589541 TOP1P11387 765 aaKnown RBP13.92□□□□□ -0.18
MBD1-218ENST00000589541 CSF2RAP15509 400 aa13.92□□□□□ -0.18
MBD1-218ENST00000589541 NMIQ13287 307 aaPredicted RBP13.92□□□□□ -0.18
MBD1-218ENST00000589541 PPIGQ13427 754 aaKnown RBP eCLIP13.92□□□□□ -0.181e-6■■■□□ 16
MBD1-218ENST00000589541 TMEM63BQ5T3F8 832 aa13.92□□□□□ -0.18
MBD1-218ENST00000589541 SYDE2Q5VT97 1194 aa13.92□□□□□ -0.18
MBD1-218ENST00000589541 C16orf59Q7L2K0 433 aa13.92□□□□□ -0.18
MBD1-218ENST00000589541 LNPKQ9C0E8 428 aa13.92□□□□□ -0.18
MBD1-218ENST00000589541 RANBP17Q9H2T7 1088 aaKnown RBP13.92□□□□□ -0.18
MBD1-218ENST00000589541 TRIM6-TRIM34B2RNG4 842 aa13.91□□□□□ -0.18
MBD1-218ENST00000589541 NFIBO00712 420 aa13.91□□□□□ -0.18
MBD1-218ENST00000589541 ACRP10323 421 aa13.91□□□□□ -0.18
MBD1-218ENST00000589541 FOSL2P15408 326 aa13.91□□□□□ -0.18
MBD1-218ENST00000589541 DNAJB2P25686 324 aa13.91□□□□□ -0.18
MBD1-218ENST00000589541 CYP2C18P33260 490 aa13.91□□□□□ -0.18
MBD1-218ENST00000589541 BAATQ14032 418 aaPredicted RBP13.91□□□□□ -0.18
MBD1-218ENST00000589541 IQSEC1Q6DN90 963 aa13.91□□□□□ -0.18
MBD1-218ENST00000589541 TAPT1Q6NXT6 567 aa13.91□□□□□ -0.18
MBD1-218ENST00000589541 BTNL9Q6UXG8 535 aa13.91□□□□□ -0.18
MBD1-218ENST00000589541 TMEM199Q8N511 208 aa13.91□□□□□ -0.18
MBD1-218ENST00000589541 RILPL2Q969X0 211 aa13.91□□□□□ -0.18
MBD1-218ENST00000589541 COL25A1Q9BXS0 654 aaPredicted RBP13.91□□□□□ -0.18
MBD1-218ENST00000589541 CCDC171Q6TFL3 1326 aa13.9□□□□□ -0.18
MBD1-218ENST00000589541 TMEM265A0A087WTH1 108 aa13.9□□□□□ -0.18
MBD1-218ENST00000589541 PTPDC1A2A3K4 754 aa13.9□□□□□ -0.18
MBD1-218ENST00000589541 ZEB2O60315 1214 aa13.9□□□□□ -0.18
MBD1-218ENST00000589541 CABYRO75952 493 aa13.9□□□□□ -0.18
MBD1-218ENST00000589541 CD4P01730 458 aa13.9□□□□□ -0.18
MBD1-218ENST00000589541 ITGA7Q13683 1181 aa13.9□□□□□ -0.18
MBD1-218ENST00000589541 GRIN2CQ14957 1233 aa13.9□□□□□ -0.18
MBD1-218ENST00000589541 TMEM240Q5SV17 173 aa13.9□□□□□ -0.18
MBD1-218ENST00000589541 KIAA1211Q6ZU35 1233 aa13.9□□□□□ -0.18
MBD1-218ENST00000589541 VTA1Q9NP79 307 aa13.9□□□□□ -0.18
MBD1-218ENST00000589541 TCP11L1Q9NUJ3 509 aa13.9□□□□□ -0.18
MBD1-218ENST00000589541 ADD3Q9UEY8 706 aaKnown RBP13.9□□□□□ -0.18
MBD1-218ENST00000589541 GRIN2DO15399 1336 aa13.9□□□□□ -0.19
MBD1-218ENST00000589541 ZMYM6O95789 1325 aa13.9□□□□□ -0.19
MBD1-218ENST00000589541 GRXCR1A8MXD5 290 aa13.89□□□□□ -0.19
MBD1-218ENST00000589541 PDHBP11177 359 aa13.89□□□□□ -0.19
MBD1-218ENST00000589541 ALDH5A1P51649 535 aaPredicted RBP13.89□□□□□ -0.19
MBD1-218ENST00000589541 PSMC6P62333 389 aa13.89□□□□□ -0.19
MBD1-218ENST00000589541 AKNAD1Q5T1N1 836 aa13.89□□□□□ -0.19
MBD1-218ENST00000589541 B4GALNT3Q6L9W6 998 aa13.89□□□□□ -0.19
MBD1-218ENST00000589541 SLC30A10Q6XR72 485 aa13.89□□□□□ -0.19
MBD1-218ENST00000589541 MFSD6Q6ZSS7 791 aa13.89□□□□□ -0.19
MBD1-218ENST00000589541 ZNF365Q70YC5 407 aa13.89□□□□□ -0.19
MBD1-218ENST00000589541 TICAM2Q86XR7 235 aa13.89□□□□□ -0.19
MBD1-218ENST00000589541 TBC1D10CQ8IV04 446 aa13.89□□□□□ -0.19
MBD1-218ENST00000589541 SLC43A3Q8NBI5 491 aa13.89□□□□□ -0.19
MBD1-218ENST00000589541 MORC4Q8TE76 937 aa13.89□□□□□ -0.19
MBD1-218ENST00000589541 TIFAQ96CG3 184 aa13.89□□□□□ -0.19
MBD1-218ENST00000589541 TRPV6Q9H1D0 765 aa13.89□□□□□ -0.19
MBD1-218ENST00000589541 HIPK3Q9H422 1215 aa13.89□□□□□ -0.19
MBD1-218ENST00000589541 Q9Y3F1 56 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms