RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 SCRN1Q12765 414 aa25.98■■□□□ 1.75
R3HDM4-205ENST00000589445 ME3Q16798 604 aa25.98■■□□□ 1.75
R3HDM4-205ENST00000589445 TKFCQ3LXA3 575 aa25.98■■□□□ 1.75
R3HDM4-205ENST00000589445 CPLX2Q6PUV4 134 aaKnown RBP25.98■■□□□ 1.75
R3HDM4-205ENST00000589445 CTU1Q7Z7A3 348 aaKnown RBP25.98■■□□□ 1.75
R3HDM4-205ENST00000589445 NECAB1Q8N987 351 aa25.98■■□□□ 1.75
R3HDM4-205ENST00000589445 SOCS4Q8WXH5 440 aa25.98■■□□□ 1.75
R3HDM4-205ENST00000589445 MTMR8Q96EF0 704 aa25.98■■□□□ 1.75
R3HDM4-205ENST00000589445 FBXO40Q9UH90 709 aa25.98■■□□□ 1.75
R3HDM4-205ENST00000589445 PNMA2Q9UL42 364 aa25.98■■□□□ 1.75
R3HDM4-205ENST00000589445 LIMCH1Q9UPQ0 1083 aa25.98■■□□□ 1.75
R3HDM4-205ENST00000589445 LCTP09848 1927 aa25.98■■□□□ 1.75
R3HDM4-205ENST00000589445 ABCB11O95342 1321 aa25.97■■□□□ 1.75
R3HDM4-205ENST00000589445 PNMA6FA0A0J9YX94 578 aa25.97■■□□□ 1.75
R3HDM4-205ENST00000589445 PFKFB2O60825 505 aa25.97■■□□□ 1.75
R3HDM4-205ENST00000589445 PPP1R11O60927 126 aaPredicted RBP25.97■■□□□ 1.75
R3HDM4-205ENST00000589445 FCER1AP12319 257 aa25.97■■□□□ 1.75
R3HDM4-205ENST00000589445 HOXD10P28358 340 aa25.97■■□□□ 1.75
R3HDM4-205ENST00000589445 SMARCA1P28370 1054 aa25.97■■□□□ 1.75
R3HDM4-205ENST00000589445 KCTD2Q14681 263 aa25.97■■□□□ 1.75
R3HDM4-205ENST00000589445 MUM1L1Q5H9M0 696 aa25.97■■□□□ 1.75
R3HDM4-205ENST00000589445 CHST13Q8NET6 341 aa25.97■■□□□ 1.75
R3HDM4-205ENST00000589445 PHKBQ93100 1093 aa25.97■■□□□ 1.75
R3HDM4-205ENST00000589445 GNRH1P01148 92 aa25.96■■□□□ 1.75
R3HDM4-205ENST00000589445 PTPREP23469 700 aa25.96■■□□□ 1.75
R3HDM4-205ENST00000589445 AKAP17AQ02040 695 aaKnown RBP25.96■■□□□ 1.75
R3HDM4-205ENST00000589445 HEATR3Q7Z4Q2 680 aa25.96■■□□□ 1.75
R3HDM4-205ENST00000589445 GTF3C6Q969F1 213 aa25.96■■□□□ 1.75
R3HDM4-205ENST00000589445 SLC26A6Q9BXS9 759 aa25.96■■□□□ 1.75
R3HDM4-205ENST00000589445 SRRDQ9UH36 339 aa25.96■■□□□ 1.75
R3HDM4-205ENST00000589445 GABRQQ9UN88 632 aa25.96■■□□□ 1.75
R3HDM4-205ENST00000589445 NFIBO00712 420 aa25.95■■□□□ 1.74
R3HDM4-205ENST00000589445 ADORA2AP29274 412 aa25.95■■□□□ 1.74
R3HDM4-205ENST00000589445 FUT2Q10981 343 aa25.95■■□□□ 1.74
R3HDM4-205ENST00000589445 GRB14Q14449 540 aa25.95■■□□□ 1.74
R3HDM4-205ENST00000589445 NSMFQ6X4W1 530 aa25.95■■□□□ 1.74
R3HDM4-205ENST00000589445 ANKRD35Q8N283 1001 aa25.95■■□□□ 1.74
R3HDM4-205ENST00000589445 GPKOWQ92917 476 aaPredicted RBP eCLIP25.95■■□□□ 1.74
R3HDM4-205ENST00000589445 NUDT12Q9BQG2 462 aa25.95■■□□□ 1.74
R3HDM4-205ENST00000589445 PCDHA1Q9Y5I3 950 aa25.95■■□□□ 1.74
R3HDM4-205ENST00000589445 SLC15A5A6NIM6 579 aa25.94■■□□□ 1.74
R3HDM4-205ENST00000589445 CDKL5O76039 1030 aa25.94■■□□□ 1.74
R3HDM4-205ENST00000589445 CD2BP2O95400 341 aaKnown RBP25.94■■□□□ 1.74
R3HDM4-205ENST00000589445 FLT3LGP49771 235 aa25.94■■□□□ 1.74
R3HDM4-205ENST00000589445 TRIM22Q8IYM9 498 aa25.94■■□□□ 1.74
R3HDM4-205ENST00000589445 RAET1EQ8TD07 263 aa25.94■■□□□ 1.74
R3HDM4-205ENST00000589445 V9GY48 417 aaPredicted RBP25.94■■□□□ 1.74
R3HDM4-205ENST00000589445 IFNAR1P17181 557 aa25.93■■□□□ 1.74
R3HDM4-205ENST00000589445 TRAF1Q13077 416 aa25.93■■□□□ 1.74
R3HDM4-205ENST00000589445 CCDC83Q8IWF9 413 aa25.93■■□□□ 1.74
R3HDM4-205ENST00000589445 DDX11Q96FC9 970 aa25.93■■□□□ 1.74
R3HDM4-205ENST00000589445 PTPDC1A2A3K4 754 aa25.92■■□□□ 1.74
R3HDM4-205ENST00000589445 DTNBO60941 627 aa25.92■■□□□ 1.74
R3HDM4-205ENST00000589445 PGK2P07205 417 aa25.92■■□□□ 1.74
R3HDM4-205ENST00000589445 CYP2B6P20813 491 aa25.92■■□□□ 1.74
R3HDM4-205ENST00000589445 RGS2P41220 211 aa25.92■■□□□ 1.74
R3HDM4-205ENST00000589445 MAP2K5Q13163 448 aa25.92■■□□□ 1.74
R3HDM4-205ENST00000589445 MORN1Q5T089 497 aa25.92■■□□□ 1.74
R3HDM4-205ENST00000589445 DPP9Q86TI2 863 aa25.92■■□□□ 1.74
R3HDM4-205ENST00000589445 ZSCAN31Q96LW9 406 aaPredicted RBP25.92■■□□□ 1.74
R3HDM4-205ENST00000589445 APBA2Q99767 749 aa25.92■■□□□ 1.74
R3HDM4-205ENST00000589445 A1CFQ9NQ94 594 aaKnown RBP25.92■■□□□ 1.74
R3HDM4-205ENST00000589445 SH2B1Q9NRF2 756 aaPredicted RBP25.92■■□□□ 1.74
R3HDM4-205ENST00000589445 RBM27Q9P2N5 1060 aaKnown RBP25.92■■□□□ 1.74
R3HDM4-205ENST00000589445 MRPL11Q9Y3B7 192 aaKnown RBP25.92■■□□□ 1.74
R3HDM4-205ENST00000589445 PTCH2Q9Y6C5 1203 aa25.92■■□□□ 1.74
R3HDM4-205ENST00000589445 PFASO15067 1338 aa25.91■■□□□ 1.74
R3HDM4-205ENST00000589445 STRNO43815 780 aa25.91■■□□□ 1.74
R3HDM4-205ENST00000589445 PRMT2P55345 433 aa25.91■■□□□ 1.74
R3HDM4-205ENST00000589445 SSRP1Q08945 709 aaKnown RBP25.91■■□□□ 1.74
R3HDM4-205ENST00000589445 NTRK3Q16288 839 aa25.91■■□□□ 1.74
R3HDM4-205ENST00000589445 SLC30A10Q6XR72 485 aa25.91■■□□□ 1.74
R3HDM4-205ENST00000589445 ABRAQ8N0Z2 381 aa25.91■■□□□ 1.74
R3HDM4-205ENST00000589445 CLEC4DQ8WXI8 215 aa25.91■■□□□ 1.74
R3HDM4-205ENST00000589445 RNF26Q9BY78 433 aaPredicted RBP25.91■■□□□ 1.74
R3HDM4-205ENST00000589445 WWC2Q6AWC2 1192 aa25.9■■□□□ 1.74
R3HDM4-205ENST00000589445 IL27Q8NEV9 243 aa25.9■■□□□ 1.74
R3HDM4-205ENST00000589445 PTPN22Q9Y2R2 807 aa25.9■■□□□ 1.74
R3HDM4-205ENST00000589445 HTTP42858 3142 aa25.9■■□□□ 1.74
R3HDM4-205ENST00000589445 LRRC37A2A6NM11 1700 aa25.9■■□□□ 1.74
R3HDM4-205ENST00000589445 MCM3APO60318 1980 aa25.89■■□□□ 1.74
R3HDM4-205ENST00000589445 SCG2P13521 617 aa25.89■■□□□ 1.74
R3HDM4-205ENST00000589445 CALML3P27482 149 aa25.89■■□□□ 1.74
R3HDM4-205ENST00000589445 MCM2P49736 904 aa25.89■■□□□ 1.74
R3HDM4-205ENST00000589445 NAPAP54920 295 aa25.89■■□□□ 1.74
R3HDM4-205ENST00000589445 ST3GAL1Q11201 340 aa25.89■■□□□ 1.74
R3HDM4-205ENST00000589445 RNF207Q6ZRF8 634 aa25.89■■□□□ 1.74
R3HDM4-205ENST00000589445 GJD2Q9UKL4 321 aa25.89■■□□□ 1.74
R3HDM4-205ENST00000589445 PRPF3O43395 683 aaKnown RBP25.88■■□□□ 1.73
R3HDM4-205ENST00000589445 CFBP00751 764 aa25.88■■□□□ 1.73
R3HDM4-205ENST00000589445 PFKFB3Q16875 520 aaPredicted RBP25.88■■□□□ 1.73
R3HDM4-205ENST00000589445 SLC5A4Q9NY91 659 aa25.88■■□□□ 1.73
R3HDM4-205ENST00000589445 CYP39A1Q9NYL5 469 aa25.88■■□□□ 1.73
R3HDM4-205ENST00000589445 POTEB2H3BUK9 544 aa25.87■■□□□ 1.73
R3HDM4-205ENST00000589445 ELNP15502 786 aa25.87■■□□□ 1.73
R3HDM4-205ENST00000589445 BAATQ14032 418 aaPredicted RBP25.87■■□□□ 1.73
R3HDM4-205ENST00000589445 FBXO46Q6PJ61 603 aaPredicted RBP25.87■■□□□ 1.73
R3HDM4-205ENST00000589445 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.87■■□□□ 1.739e-6■■□□□ 11.5
R3HDM4-205ENST00000589445 MCF2L2Q86YR7 1114 aa25.87■■□□□ 1.73
R3HDM4-205ENST00000589445 STK36Q9NRP7 1315 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms