RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 TUT1Q9H6E5 874 aaKnown RBP6.91□□□□□ -1.3
LINC01539-202ENST00000589293 SMC4Q9NTJ3 1288 aa6.91□□□□□ -1.3
LINC01539-202ENST00000589293 ABCF2Q9UG63 623 aa6.91□□□□□ -1.3
LINC01539-202ENST00000589293 KCNH4Q9UQ05 1017 aa6.91□□□□□ -1.3
LINC01539-202ENST00000589293 USP20Q9Y2K6 914 aa6.91□□□□□ -1.3
LINC01539-202ENST00000589293 DAGLAQ9Y4D2 1042 aa6.91□□□□□ -1.3
LINC01539-202ENST00000589293 AK9Q5TCS8 1911 aa6.91□□□□□ -1.3
LINC01539-202ENST00000589293 LAMB1P07942 1786 aa6.9□□□□□ -1.3
LINC01539-202ENST00000589293 DCDC2BA2VCK2 349 aa6.9□□□□□ -1.3
LINC01539-202ENST00000589293 ADCY3O60266 1144 aa6.9□□□□□ -1.3
LINC01539-202ENST00000589293 ENTPD3O75355 529 aa6.9□□□□□ -1.3
LINC01539-202ENST00000589293 MICAL2O94851 1124 aa6.9□□□□□ -1.3
LINC01539-202ENST00000589293 FAM157BP0CG42 384 aa6.9□□□□□ -1.3
LINC01539-202ENST00000589293 CYP2C8P10632 490 aa6.9□□□□□ -1.3
LINC01539-202ENST00000589293 IL15P40933 162 aaPredicted RBP6.9□□□□□ -1.3
LINC01539-202ENST00000589293 EIF1AXP47813 144 aaKnown RBP6.9□□□□□ -1.3
LINC01539-202ENST00000589293 GJA8P48165 433 aa6.9□□□□□ -1.3
LINC01539-202ENST00000589293 IDH3AP50213 366 aa6.9□□□□□ -1.3
LINC01539-202ENST00000589293 GSTO1P78417 241 aa6.9□□□□□ -1.3
LINC01539-202ENST00000589293 KRT76Q01546 638 aa6.9□□□□□ -1.3
LINC01539-202ENST00000589293 PRKCZQ05513 592 aa6.9□□□□□ -1.3
LINC01539-202ENST00000589293 TNP2Q05952 138 aa6.9□□□□□ -1.3
LINC01539-202ENST00000589293 PICALMQ13492 652 aa6.9□□□□□ -1.3
LINC01539-202ENST00000589293 EFHC2Q5JST6 749 aa6.9□□□□□ -1.3
LINC01539-202ENST00000589293 RNFT1Q5M7Z0 435 aa6.9□□□□□ -1.3
LINC01539-202ENST00000589293 NOL9Q5SY16 702 aaKnown RBP6.9□□□□□ -1.3
LINC01539-202ENST00000589293 CCAR1Q8IX12 1150 aaKnown RBP6.9□□□□□ -1.3
LINC01539-202ENST00000589293 NPAS3Q8IXF0 933 aa6.9□□□□□ -1.3
LINC01539-202ENST00000589293 SCYL3Q8IZE3 742 aa6.9□□□□□ -1.3
LINC01539-202ENST00000589293 ANKRD44Q8N8A2 993 aa6.9□□□□□ -1.3
LINC01539-202ENST00000589293 VGLL2Q8N8G2 317 aa6.9□□□□□ -1.3
LINC01539-202ENST00000589293 U2AF1L4Q8WU68 220 aaKnown RBP6.9□□□□□ -1.3
LINC01539-202ENST00000589293 KAZALD1Q96I82 304 aa6.9□□□□□ -1.3
LINC01539-202ENST00000589293 CWC22Q9HCG8 908 aaKnown RBP6.9□□□□□ -1.3
LINC01539-202ENST00000589293 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.9□□□□□ -1.3
LINC01539-202ENST00000589293 AKAP2Q9Y2D5 859 aa6.9□□□□□ -1.3
LINC01539-202ENST00000589293 TRIM75PA6NK02 468 aa6.89□□□□□ -1.31
LINC01539-202ENST00000589293 ATXN7O15265 892 aaPredicted RBP6.89□□□□□ -1.31
LINC01539-202ENST00000589293 FZD6O60353 706 aa6.89□□□□□ -1.31
LINC01539-202ENST00000589293 CTNND1O60716 968 aaKnown RBP6.89□□□□□ -1.31
LINC01539-202ENST00000589293 CIAO1O76071 339 aa6.89□□□□□ -1.31
LINC01539-202ENST00000589293 SGPL1O95470 568 aa6.89□□□□□ -1.31
LINC01539-202ENST00000589293 LDHCP07864 332 aa6.89□□□□□ -1.31
LINC01539-202ENST00000589293 MAPTP10636 758 aaKnown RBP6.89□□□□□ -1.31
LINC01539-202ENST00000589293 FGFR2P21802 821 aa6.89□□□□□ -1.31
LINC01539-202ENST00000589293 BRD2P25440 801 aaKnown RBP6.89□□□□□ -1.31
LINC01539-202ENST00000589293 PRDX5P30044 214 aa6.89□□□□□ -1.31
LINC01539-202ENST00000589293 RGS3P49796 1198 aa6.89□□□□□ -1.31
LINC01539-202ENST00000589293 CAP1Q01518 475 aa6.89□□□□□ -1.31
LINC01539-202ENST00000589293 NFIAQ12857 509 aa6.89□□□□□ -1.31
LINC01539-202ENST00000589293 SFSWAPQ12872 951 aaKnown RBP6.89□□□□□ -1.31
LINC01539-202ENST00000589293 ALDH1L2Q3SY69 923 aa6.89□□□□□ -1.31
LINC01539-202ENST00000589293 USP44Q9H0E7 712 aa6.89□□□□□ -1.31
LINC01539-202ENST00000589293 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.89□□□□□ -1.31
LINC01539-202ENST00000589293 ZNF112Q9UJU3 913 aa6.89□□□□□ -1.31
LINC01539-202ENST00000589293 SLC45A1Q9Y2W3 748 aa6.89□□□□□ -1.31
LINC01539-202ENST00000589293 PCDHGC4Q9Y5F7 938 aa6.89□□□□□ -1.31
LINC01539-202ENST00000589293 SALL1Q9NSC2 1324 aa6.88□□□□□ -1.31
LINC01539-202ENST00000589293 A0A0G2JLL6 359 aaPredicted RBP6.88□□□□□ -1.31
LINC01539-202ENST00000589293 PTPRAP18433 802 aa6.88□□□□□ -1.31
LINC01539-202ENST00000589293 BTDP43251 543 aa6.88□□□□□ -1.31
LINC01539-202ENST00000589293 ZAP70P43403 619 aa6.88□□□□□ -1.31
LINC01539-202ENST00000589293 FLT3LGP49771 235 aa6.88□□□□□ -1.31
LINC01539-202ENST00000589293 MVPQ14764 893 aaKnown RBP6.88□□□□□ -1.31
LINC01539-202ENST00000589293 TRIP4Q15650 581 aaPredicted RBP6.88□□□□□ -1.31
LINC01539-202ENST00000589293 SV2AQ7L0J3 742 aa6.88□□□□□ -1.31
LINC01539-202ENST00000589293 NECAB2Q7Z6G3 386 aa6.88□□□□□ -1.31
LINC01539-202ENST00000589293 PRRT2Q7Z6L0 340 aaPredicted RBP6.88□□□□□ -1.31
LINC01539-202ENST00000589293 SSH1Q8WYL5 1049 aa6.88□□□□□ -1.31
LINC01539-202ENST00000589293 GMCL1Q96IK5 515 aa6.88□□□□□ -1.31
LINC01539-202ENST00000589293 NEUROD6Q96NK8 337 aa6.88□□□□□ -1.31
LINC01539-202ENST00000589293 DEFB118Q96PH6 123 aa6.88□□□□□ -1.31
LINC01539-202ENST00000589293 API5Q9BZZ5 524 aaKnown RBP6.88□□□□□ -1.31
LINC01539-202ENST00000589293 AS3MTQ9HBK9 375 aa6.88□□□□□ -1.31
LINC01539-202ENST00000589293 A0A1W2PPC1 479 aa6.87□□□□□ -1.31
LINC01539-202ENST00000589293 C2CD2LO14523 706 aa6.87□□□□□ -1.31
LINC01539-202ENST00000589293 MAP4K4O95819 1239 aaPredicted RBP6.87□□□□□ -1.31
LINC01539-202ENST00000589293 GNAI3P08754 354 aa6.87□□□□□ -1.31
LINC01539-202ENST00000589293 BCRP11274 1271 aa6.87□□□□□ -1.31
LINC01539-202ENST00000589293 ELNP15502 786 aa6.87□□□□□ -1.31
LINC01539-202ENST00000589293 PHKA1P46020 1223 aa6.87□□□□□ -1.31
LINC01539-202ENST00000589293 GCLCP48506 637 aaPredicted RBP6.87□□□□□ -1.31
LINC01539-202ENST00000589293 IRX3P78415 501 aaPredicted RBP6.87□□□□□ -1.31
LINC01539-202ENST00000589293 GLYCTKQ8IVS8 523 aa6.87□□□□□ -1.31
LINC01539-202ENST00000589293 ANKRD13CQ8N6S4 541 aa6.87□□□□□ -1.31
LINC01539-202ENST00000589293 SLC17A8Q8NDX2 589 aa6.87□□□□□ -1.31
LINC01539-202ENST00000589293 SHISA4Q96DD7 197 aa6.87□□□□□ -1.31
LINC01539-202ENST00000589293 CEP63Q96MT8 703 aa6.87□□□□□ -1.31
LINC01539-202ENST00000589293 IDI2Q9BXS1 227 aa6.87□□□□□ -1.31
LINC01539-202ENST00000589293 GZF1Q9H116 711 aaPredicted RBP6.87□□□□□ -1.31
LINC01539-202ENST00000589293 BRD7Q9NPI1 651 aa6.87□□□□□ -1.31
LINC01539-202ENST00000589293 TMOD4Q9NZQ9 345 aa6.87□□□□□ -1.31
LINC01539-202ENST00000589293 RAI14Q9P0K7 980 aa6.87□□□□□ -1.31
LINC01539-202ENST00000589293 GABRQQ9UN88 632 aa6.87□□□□□ -1.31
LINC01539-202ENST00000589293 AGTPBP1Q9UPW5 1226 aa6.87□□□□□ -1.31
LINC01539-202ENST00000589293 MTMR7Q9Y216 660 aa6.87□□□□□ -1.31
LINC01539-202ENST00000589293 AFG3L2Q9Y4W6 797 aa6.87□□□□□ -1.31
LINC01539-202ENST00000589293 KCNMB2Q9Y691 235 aa6.87□□□□□ -1.31
LINC01539-202ENST00000589293 MYH13Q9UKX3 1938 aa6.87□□□□□ -1.31
LINC01539-202ENST00000589293 MROH7-TTC4A0A0A0MT08 1334 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms