RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 CRTC3Q6UUV7 619 aa5.62□□□□□ -1.51
SMAD4-207ENST00000589076 GK5Q6ZS86 529 aa5.62□□□□□ -1.51
SMAD4-207ENST00000589076 LSRQ86X29 649 aaPredicted RBP5.62□□□□□ -1.51
SMAD4-207ENST00000589076 CCDC144CPQ8IYA2 1237 aa5.62□□□□□ -1.51
SMAD4-207ENST00000589076 REXO1Q8N1G1 1221 aaKnown RBP5.62□□□□□ -1.51
SMAD4-207ENST00000589076 TP53I13Q8NBR0 393 aaPredicted RBP5.62□□□□□ -1.51
SMAD4-207ENST00000589076 SLC6A18Q96N87 628 aa5.62□□□□□ -1.51
SMAD4-207ENST00000589076 JMJD8Q96S16 334 aa5.62□□□□□ -1.51
SMAD4-207ENST00000589076 METTL5Q9NRN9 209 aaKnown RBP5.62□□□□□ -1.51
SMAD4-207ENST00000589076 MINPP1Q9UNW1 487 aa5.62□□□□□ -1.51
SMAD4-207ENST00000589076 IRS2Q9Y4H2 1338 aa5.62□□□□□ -1.51
SMAD4-207ENST00000589076 NME1P15531 152 aaKnown RBP5.61□□□□□ -1.51
SMAD4-207ENST00000589076 IGFBP6P24592 240 aaPredicted RBP5.61□□□□□ -1.51
SMAD4-207ENST00000589076 KRTAP10-2P60368 255 aa5.61□□□□□ -1.51
SMAD4-207ENST00000589076 RBM10P98175 930 aaKnown RBP5.61□□□□□ -1.51
SMAD4-207ENST00000589076 APOBRQ0VD83 1088 aa5.61□□□□□ -1.51
SMAD4-207ENST00000589076 SEZ6Q53EL9 994 aa5.61□□□□□ -1.51
SMAD4-207ENST00000589076 NT5DC1Q5TFE4 455 aa5.61□□□□□ -1.51
SMAD4-207ENST00000589076 CABP7Q86V35 215 aa5.61□□□□□ -1.51
SMAD4-207ENST00000589076 ZNF296Q8WUU4 475 aaPredicted RBP5.61□□□□□ -1.51
SMAD4-207ENST00000589076 PDLIM7Q9NR12 457 aa5.61□□□□□ -1.51
SMAD4-207ENST00000589076 KCNQ5Q9NR82 932 aa5.61□□□□□ -1.51
SMAD4-207ENST00000589076 SRGAP3O43295 1099 aa5.6□□□□□ -1.51
SMAD4-207ENST00000589076 GREM1O60565 184 aa5.6□□□□□ -1.51
SMAD4-207ENST00000589076 TBC1D8O95759 1140 aa5.6□□□□□ -1.51
SMAD4-207ENST00000589076 NCAM1P13591 858 aa5.6□□□□□ -1.51
SMAD4-207ENST00000589076 CTSKP43235 329 aa5.6□□□□□ -1.51
SMAD4-207ENST00000589076 GJA9P57773 515 aa5.6□□□□□ -1.51
SMAD4-207ENST00000589076 MVKQ03426 396 aa5.6□□□□□ -1.51
SMAD4-207ENST00000589076 HHIPL2Q6UWX4 724 aa5.6□□□□□ -1.51
SMAD4-207ENST00000589076 ERMP1Q7Z2K6 904 aa5.6□□□□□ -1.51
SMAD4-207ENST00000589076 C7orf61Q8IZ16 206 aa5.6□□□□□ -1.51
SMAD4-207ENST00000589076 F8W031 263 aaPredicted RBP5.59□□□□□ -1.51
SMAD4-207ENST00000589076 TNFRSF10CO14798 259 aa5.59□□□□□ -1.51
SMAD4-207ENST00000589076 PRICKLE3O43900 615 aaPredicted RBP5.59□□□□□ -1.51
SMAD4-207ENST00000589076 DBHP09172 617 aa5.59□□□□□ -1.51
SMAD4-207ENST00000589076 CORO7P57737 925 aa5.59□□□□□ -1.51
SMAD4-207ENST00000589076 LIPIQ6XZB0 460 aa5.59□□□□□ -1.51
SMAD4-207ENST00000589076 HS2ST1Q7LGA3 356 aa5.59□□□□□ -1.51
SMAD4-207ENST00000589076 TMEM192Q8IY95 271 aa5.59□□□□□ -1.51
SMAD4-207ENST00000589076 FNIP1Q8TF40 1166 aa5.59□□□□□ -1.51
SMAD4-207ENST00000589076 SMARCC1Q92922 1105 aaPredicted RBP5.59□□□□□ -1.51
SMAD4-207ENST00000589076 RNF34Q969K3 372 aa5.59□□□□□ -1.51
SMAD4-207ENST00000589076 SUCOQ9UBS9 1254 aaKnown RBP5.59□□□□□ -1.51
SMAD4-207ENST00000589076 SH3D21A4FU49 640 aa5.58□□□□□ -1.52
SMAD4-207ENST00000589076 ZNF76P36508 570 aa5.58□□□□□ -1.52
SMAD4-207ENST00000589076 CLCQ05315 142 aa5.58□□□□□ -1.52
SMAD4-207ENST00000589076 SAPCD2Q86UD0 394 aa5.58□□□□□ -1.52
SMAD4-207ENST00000589076 SPATA25Q9BR10 227 aa5.58□□□□□ -1.52
SMAD4-207ENST00000589076 GGT7Q9UJ14 662 aa5.58□□□□□ -1.52
SMAD4-207ENST00000589076 SF3B6Q9Y3B4 125 aaKnown RBP5.58□□□□□ -1.52
SMAD4-207ENST00000589076 MEIS3P2A8K0S8 358 aa5.57□□□□□ -1.52
SMAD4-207ENST00000589076 IMPDH2P12268 514 aa5.57□□□□□ -1.52
SMAD4-207ENST00000589076 MAGEA10P43363 369 aaPredicted RBP5.57□□□□□ -1.52
SMAD4-207ENST00000589076 PRR5P85299 388 aa5.57□□□□□ -1.52
SMAD4-207ENST00000589076 HDLBPQ00341 1268 aaKnown RBP5.57□□□□□ -1.52
SMAD4-207ENST00000589076 FANCCQ00597 558 aa5.57□□□□□ -1.52
SMAD4-207ENST00000589076 RTP2Q5QGT7 225 aa5.57□□□□□ -1.52
SMAD4-207ENST00000589076 FERMT3Q86UX7 667 aa5.57□□□□□ -1.52
SMAD4-207ENST00000589076 TMEM52Q8NDY8 209 aa5.57□□□□□ -1.52
SMAD4-207ENST00000589076 ALG3Q92685 438 aa5.57□□□□□ -1.52
SMAD4-207ENST00000589076 NKD1Q969G9 470 aa5.57□□□□□ -1.52
SMAD4-207ENST00000589076 SLC12A9Q9BXP2 914 aa5.57□□□□□ -1.52
SMAD4-207ENST00000589076 COPRSQ9NQ92 184 aa5.57□□□□□ -1.52
SMAD4-207ENST00000589076 NUDT5Q9UKK9 219 aa5.57□□□□□ -1.52
SMAD4-207ENST00000589076 L1CAMP32004 1257 aa5.56□□□□□ -1.52
SMAD4-207ENST00000589076 CRKP46108 304 aa5.56□□□□□ -1.52
SMAD4-207ENST00000589076 POU4F1Q01851 419 aa5.56□□□□□ -1.52
SMAD4-207ENST00000589076 VWA3BQ502W6 1294 aa5.56□□□□□ -1.52
SMAD4-207ENST00000589076 INTS3Q68E01 1043 aaKnown RBP5.56□□□□□ -1.52
SMAD4-207ENST00000589076 TTLL7Q6ZT98 887 aa5.56□□□□□ -1.52
SMAD4-207ENST00000589076 METTL16Q86W50 562 aaKnown RBP5.56□□□□□ -1.52
SMAD4-207ENST00000589076 SMPD4Q9NXE4 827 aa5.56□□□□□ -1.52
SMAD4-207ENST00000589076 UBP1Q9NZI7 540 aa5.56□□□□□ -1.52
SMAD4-207ENST00000589076 NTMQ9P121 344 aa5.56□□□□□ -1.52
SMAD4-207ENST00000589076 FGF10O15520 208 aaPredicted RBP5.55□□□□□ -1.52
SMAD4-207ENST00000589076 ERCC5P28715 1186 aaPredicted RBP5.55□□□□□ -1.52
SMAD4-207ENST00000589076 CNR2P34972 360 aa5.55□□□□□ -1.52
SMAD4-207ENST00000589076 B3GNT8Q7Z7M8 397 aa5.55□□□□□ -1.52
SMAD4-207ENST00000589076 NT5DC4Q86YG4 428 aa5.55□□□□□ -1.52
SMAD4-207ENST00000589076 ADGRG2Q8IZP9 1017 aa5.55□□□□□ -1.52
SMAD4-207ENST00000589076 CARFQ8N187 725 aa5.55□□□□□ -1.52
SMAD4-207ENST00000589076 NLGN2Q8NFZ4 835 aa5.55□□□□□ -1.52
SMAD4-207ENST00000589076 DDX1Q92499 740 aaKnown RBP5.55□□□□□ -1.52
SMAD4-207ENST00000589076 PTCHD1Q96NR3 888 aa5.55□□□□□ -1.52
SMAD4-207ENST00000589076 SLC9A7Q96T83 725 aa5.55□□□□□ -1.52
SMAD4-207ENST00000589076 SRRTQ9BXP5 876 aaKnown RBP5.55□□□□□ -1.52
SMAD4-207ENST00000589076 A0A1B0GTL3 188 aa5.54□□□□□ -1.52
SMAD4-207ENST00000589076 FAM86C2PA6NEL3 165 aa5.54□□□□□ -1.52
SMAD4-207ENST00000589076 H0Y8X5 98 aa5.54□□□□□ -1.52
SMAD4-207ENST00000589076 PLA2G1BP04054 148 aaKnown RBP5.54□□□□□ -1.52
SMAD4-207ENST00000589076 ITGA4P13612 1032 aa5.54□□□□□ -1.52
SMAD4-207ENST00000589076 ATF2P15336 505 aa5.54□□□□□ -1.52
SMAD4-207ENST00000589076 TACR1P25103 407 aa5.54□□□□□ -1.52
SMAD4-207ENST00000589076 PMS1P54277 932 aaKnown RBP5.54□□□□□ -1.52
SMAD4-207ENST00000589076 SLC9A5Q14940 896 aa5.54□□□□□ -1.52
SMAD4-207ENST00000589076 ANKRD39Q53RE8 183 aa5.54□□□□□ -1.52
SMAD4-207ENST00000589076 C9orf131Q5VYM1 1079 aa5.54□□□□□ -1.52
SMAD4-207ENST00000589076 ZNF526Q8TF50 670 aaPredicted RBP5.54□□□□□ -1.52
SMAD4-207ENST00000589076 PEX11GQ96HA9 241 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms