RNA–Protein interactions for RNA: ENST00000588534.1

ZNF554-202, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 4,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-202ENST00000588534 RESTQ13127 1097 aa8.4□□□□□ -1.06
ZNF554-202ENST00000588534 SEC23AQ15436 765 aa8.4□□□□□ -1.06
ZNF554-202ENST00000588534 QRICH1Q2TAL8 776 aa8.4□□□□□ -1.06
ZNF554-202ENST00000588534 RNF207Q6ZRF8 634 aa8.4□□□□□ -1.06
ZNF554-202ENST00000588534 DPP9Q86TI2 863 aa8.4□□□□□ -1.06
ZNF554-202ENST00000588534 SYCP3Q8IZU3 236 aa8.4□□□□□ -1.06
ZNF554-202ENST00000588534 IWS1Q96ST2 819 aa8.4□□□□□ -1.06
ZNF554-202ENST00000588534 TEX13BQ9BXU2 312 aa8.4□□□□□ -1.06
ZNF554-202ENST00000588534 CLSTN2Q9H4D0 955 aa8.4□□□□□ -1.06
ZNF554-202ENST00000588534 ACAD9Q9H845 621 aa8.4□□□□□ -1.06
ZNF554-202ENST00000588534 SIPA1L3O60292 1781 aaPredicted RBP8.4□□□□□ -1.06
ZNF554-202ENST00000588534 SPEF2Q9C093 1822 aa8.4□□□□□ -1.06
ZNF554-202ENST00000588534 ARHGEF35A5YM69 484 aa8.4□□□□□ -1.06
ZNF554-202ENST00000588534 CDC27P30260 824 aa8.4□□□□□ -1.06
ZNF554-202ENST00000588534 MATR3P43243 847 aaKnown RBP eCLIP8.4□□□□□ -1.06
ZNF554-202ENST00000588534 GTF2A2P52657 109 aa8.4□□□□□ -1.06
ZNF554-202ENST00000588534 SMTNP53814 917 aa8.4□□□□□ -1.06
ZNF554-202ENST00000588534 ZNF397Q8NF99 534 aaPredicted RBP8.4□□□□□ -1.06
ZNF554-202ENST00000588534 OTUD5Q96G74 571 aa8.4□□□□□ -1.06
ZNF554-202ENST00000588534 FAM20AQ96MK3 541 aa8.4□□□□□ -1.06
ZNF554-202ENST00000588534 TIGD1Q96MW7 591 aa8.4□□□□□ -1.06
ZNF554-202ENST00000588534 PARK7Q99497 189 aaKnown RBP8.4□□□□□ -1.06
ZNF554-202ENST00000588534 JPH2Q9BR39 696 aaPredicted RBP8.4□□□□□ -1.06
ZNF554-202ENST00000588534 KIAA1683Q9H0B3 1180 aa8.4□□□□□ -1.06
ZNF554-202ENST00000588534 RPAP3Q9H6T3 665 aaPredicted RBP8.4□□□□□ -1.06
ZNF554-202ENST00000588534 RIC8AQ9NPQ8 531 aa8.4□□□□□ -1.06
ZNF554-202ENST00000588534 UBR2Q8IWV8 1755 aa8.4□□□□□ -1.06
ZNF554-202ENST00000588534 PALM3A6NDB9 673 aaPredicted RBP8.4□□□□□ -1.07
ZNF554-202ENST00000588534 DDTLA6NHG4 134 aaPredicted RBP8.4□□□□□ -1.07
ZNF554-202ENST00000588534 FZD9O00144 591 aa8.4□□□□□ -1.07
ZNF554-202ENST00000588534 RPL13P26373 211 aaKnown RBP8.4□□□□□ -1.07
ZNF554-202ENST00000588534 STAT3P40763 770 aa8.4□□□□□ -1.07
ZNF554-202ENST00000588534 SREBF2Q12772 1141 aa8.4□□□□□ -1.07
ZNF554-202ENST00000588534 ZSCAN23Q3MJ62 389 aa8.4□□□□□ -1.07
ZNF554-202ENST00000588534 PRR16Q569H4 304 aa8.4□□□□□ -1.07
ZNF554-202ENST00000588534 MIER3Q7Z3K6 550 aa8.4□□□□□ -1.07
ZNF554-202ENST00000588534 MLKLQ8NB16 471 aa8.4□□□□□ -1.07
ZNF554-202ENST00000588534 SLC17A8Q8NDX2 589 aa8.4□□□□□ -1.07
ZNF554-202ENST00000588534 FAM200AQ8TCP9 573 aa8.4□□□□□ -1.07
ZNF554-202ENST00000588534 NSUN6Q8TEA1 469 aaKnown RBP8.4□□□□□ -1.07
ZNF554-202ENST00000588534 TBCKQ8TEA7 893 aa8.4□□□□□ -1.07
ZNF554-202ENST00000588534 MKL1Q969V6 931 aa8.4□□□□□ -1.07
ZNF554-202ENST00000588534 COA7Q96BR5 231 aa8.4□□□□□ -1.07
ZNF554-202ENST00000588534 ANO3Q9BYT9 981 aa8.4□□□□□ -1.07
ZNF554-202ENST00000588534 PAPPAQ13219 1627 aa8.4□□□□□ -1.07
ZNF554-202ENST00000588534 ZNF202O95125 648 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 SHMT1P34896 483 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 AFMP43652 599 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 PTGDRQ13258 359 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 FAM160B1Q5W0V3 765 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 NCAPH2Q6IBW4 605 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 KCNV1Q6PIU1 500 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.39□□□□□ -1.07
ZNF554-202ENST00000588534 TRIML1Q8N9V2 468 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 ZNF579Q8NAF0 562 aaKnown RBP8.39□□□□□ -1.07
ZNF554-202ENST00000588534 CHST13Q8NET6 341 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 EXOC7Q9UPT5 735 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 HOXD10P28358 340 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 BACE1P56817 501 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 SEMA3FQ13275 785 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 MTMR2Q13614 643 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 SYCP1Q15431 976 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 SRBD1Q8N5C6 995 aaKnown RBP8.39□□□□□ -1.07
ZNF554-202ENST00000588534 CCDC150Q8NCX0 1101 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 NOC3LQ8WTT2 800 aaKnown RBP8.39□□□□□ -1.07
ZNF554-202ENST00000588534 ATP6V0A1Q93050 837 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 IFT74Q96LB3 600 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 GBA2Q9HCG7 927 aaPredicted RBP8.39□□□□□ -1.07
ZNF554-202ENST00000588534 STK17AQ9UEE5 414 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 A0A1B0GVL5 298 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 UNCXA6NJT0 531 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 ECE1P42892 770 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 DNM2P50570 870 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 LDHDQ86WU2 507 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 TMEM87AQ8NBN3 555 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 LINC00301Q8NCQ3 95 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 NEK9Q8TD19 979 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 MLXIPQ9HAP2 919 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 NRBP2Q9NSY0 501 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 RNF146Q9NTX7 359 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 LMBRD1Q9NUN5 540 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 FAM198AQ9UFP1 575 aa8.39□□□□□ -1.07
ZNF554-202ENST00000588534 SRPRBQ9Y5M8 271 aaKnown RBP8.39□□□□□ -1.07
ZNF554-202ENST00000588534 TESPA1A2RU30 521 aaPredicted RBP8.38□□□□□ -1.07
ZNF554-202ENST00000588534 NFKBIEO00221 500 aa8.38□□□□□ -1.07
ZNF554-202ENST00000588534 GCLCP48506 637 aaPredicted RBP8.38□□□□□ -1.07
ZNF554-202ENST00000588534 HMGCS2P54868 508 aa8.38□□□□□ -1.07
ZNF554-202ENST00000588534 KLHL10Q6JEL2 608 aa8.38□□□□□ -1.07
ZNF554-202ENST00000588534 NLGN2Q8NFZ4 835 aa8.38□□□□□ -1.07
ZNF554-202ENST00000588534 MAF1Q9H063 256 aa8.38□□□□□ -1.07
ZNF554-202ENST00000588534 ELP3Q9H9T3 547 aa8.38□□□□□ -1.07
ZNF554-202ENST00000588534 TBC1D22BQ9NU19 505 aa8.38□□□□□ -1.07
ZNF554-202ENST00000588534 TOGARAM1Q9Y4F4 1720 aa8.38□□□□□ -1.07
ZNF554-202ENST00000588534 ROBO3Q96MS0 1386 aa8.38□□□□□ -1.07
ZNF554-202ENST00000588534 POLR2DO15514 142 aaKnown RBP8.38□□□□□ -1.07
ZNF554-202ENST00000588534 PPATQ06203 517 aa8.38□□□□□ -1.07
ZNF554-202ENST00000588534 SNRNP48Q6IEG0 339 aaKnown RBP8.38□□□□□ -1.07
ZNF554-202ENST00000588534 CLEC17AQ6ZS10 378 aa8.38□□□□□ -1.07
ZNF554-202ENST00000588534 FMNL3Q8IVF7 1028 aa8.38□□□□□ -1.07
ZNF554-202ENST00000588534 CDAN1Q8IWY9 1227 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms