RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 COG2Q14746 738 aa8.69□□□□□ -1.02
TPM4-210ENST00000588507 CNKSR3Q6P9H4 555 aa8.69□□□□□ -1.02
TPM4-210ENST00000588507 FBXO11Q86XK2 927 aa8.69□□□□□ -1.02
TPM4-210ENST00000588507 SP7Q8TDD2 431 aaPredicted RBP8.69□□□□□ -1.02
TPM4-210ENST00000588507 BORCS6Q96GS4 357 aa8.69□□□□□ -1.02
TPM4-210ENST00000588507 RPAP3Q9H6T3 665 aaPredicted RBP8.69□□□□□ -1.02
TPM4-210ENST00000588507 ZBTB21Q9ULJ3 1066 aa8.69□□□□□ -1.02
TPM4-210ENST00000588507 LAS1LQ9Y4W2 734 aaKnown RBP8.69□□□□□ -1.02
TPM4-210ENST00000588507 FANCMQ8IYD8 2048 aa8.68□□□□□ -1.02
TPM4-210ENST00000588507 MYO10Q9HD67 2058 aa8.68□□□□□ -1.02
TPM4-210ENST00000588507 EFCAB14O75071 495 aa8.68□□□□□ -1.02
TPM4-210ENST00000588507 GDF11O95390 407 aa8.68□□□□□ -1.02
TPM4-210ENST00000588507 SP9P0CG40 484 aa8.68□□□□□ -1.02
TPM4-210ENST00000588507 RIPK4P57078 832 aa8.68□□□□□ -1.02
TPM4-210ENST00000588507 HTRA4P83105 476 aaPredicted RBP8.68□□□□□ -1.02
TPM4-210ENST00000588507 BFSP2Q13515 415 aa8.68□□□□□ -1.02
TPM4-210ENST00000588507 CCDC144BQ3MJ40 725 aa8.68□□□□□ -1.02
TPM4-210ENST00000588507 MB21D1Q8N884 522 aa8.68□□□□□ -1.02
TPM4-210ENST00000588507 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.68□□□□□ -1.02
TPM4-210ENST00000588507 PPP2R3CQ969Q6 453 aa8.68□□□□□ -1.02
TPM4-210ENST00000588507 MROH5Q6ZUA9 1318 aa8.68□□□□□ -1.02
TPM4-210ENST00000588507 MAPK8IP3Q9UPT6 1336 aa8.68□□□□□ -1.02
TPM4-210ENST00000588507 SLC25A27O95847 323 aa8.67□□□□□ -1.02
TPM4-210ENST00000588507 NPR3P17342 541 aa8.67□□□□□ -1.02
TPM4-210ENST00000588507 BTDP43251 543 aa8.67□□□□□ -1.02
TPM4-210ENST00000588507 SHROOM1Q2M3G4 852 aaPredicted RBP8.67□□□□□ -1.02
TPM4-210ENST00000588507 LRRFIP1Q32MZ4 808 aaKnown RBP8.67□□□□□ -1.02
TPM4-210ENST00000588507 LMBR1LQ6UX01 489 aa8.67□□□□□ -1.02
TPM4-210ENST00000588507 SLF2Q8IX21 1173 aa8.67□□□□□ -1.02
TPM4-210ENST00000588507 TMEFF1Q8IYR6 380 aa8.67□□□□□ -1.02
TPM4-210ENST00000588507 EFHBQ8N7U6 833 aa8.67□□□□□ -1.02
TPM4-210ENST00000588507 PIK3R5Q8WYR1 880 aa8.67□□□□□ -1.02
TPM4-210ENST00000588507 SUSD6Q92537 303 aa8.67□□□□□ -1.02
TPM4-210ENST00000588507 SMG1Q96Q15 3661 aaKnown RBP8.67□□□□□ -1.02
TPM4-210ENST00000588507 PUS3Q9BZE2 481 aaKnown RBP8.67□□□□□ -1.02
TPM4-210ENST00000588507 SMOC2Q9H3U7 446 aa8.67□□□□□ -1.02
TPM4-210ENST00000588507 MYH16Q9H6N6 1097 aa8.67□□□□□ -1.02
TPM4-210ENST00000588507 PI4KBQ9UBF8 816 aa8.67□□□□□ -1.02
TPM4-210ENST00000588507 HECTD1Q9ULT8 2610 aa8.67□□□□□ -1.02
TPM4-210ENST00000588507 KRT38O76015 456 aa8.66□□□□□ -1.02
TPM4-210ENST00000588507 SMPD1P17405 629 aa8.66□□□□□ -1.02
TPM4-210ENST00000588507 TGM1P22735 817 aa8.66□□□□□ -1.02
TPM4-210ENST00000588507 LMOD3Q0VAK6 560 aa8.66□□□□□ -1.02
TPM4-210ENST00000588507 IKBKEQ14164 716 aa8.66□□□□□ -1.02
TPM4-210ENST00000588507 FSCN1Q16658 493 aaKnown RBP8.66□□□□□ -1.02
TPM4-210ENST00000588507 LARP1BQ659C4 914 aaKnown RBP8.66□□□□□ -1.02
TPM4-210ENST00000588507 MAMDC4Q6UXC1 1216 aa8.66□□□□□ -1.02
TPM4-210ENST00000588507 FAM163AQ96GL9 167 aaPredicted RBP8.66□□□□□ -1.02
TPM4-210ENST00000588507 KIAA1683Q9H0B3 1180 aa8.66□□□□□ -1.02
TPM4-210ENST00000588507 PNNQ9H307 717 aaKnown RBP8.66□□□□□ -1.02
TPM4-210ENST00000588507 ABHD16BQ9H3Z7 469 aa8.66□□□□□ -1.02
TPM4-210ENST00000588507 CACNA2D2Q9NY47 1150 aa8.66□□□□□ -1.02
TPM4-210ENST00000588507 MYH2Q9UKX2 1941 aa8.65□□□□□ -1.02
TPM4-210ENST00000588507 GRM6O15303 877 aa8.65□□□□□ -1.02
TPM4-210ENST00000588507 RB1P06400 928 aa8.65□□□□□ -1.02
TPM4-210ENST00000588507 RHBDL3P58872 404 aa8.65□□□□□ -1.02
TPM4-210ENST00000588507 NOL8Q76FK4 1167 aaKnown RBP8.65□□□□□ -1.02
TPM4-210ENST00000588507 TRIM34Q9BYJ4 488 aa8.65□□□□□ -1.02
TPM4-210ENST00000588507 AP5M1Q9H0R1 490 aa8.65□□□□□ -1.02
TPM4-210ENST00000588507 BARX2Q9UMQ3 279 aaPredicted RBP8.65□□□□□ -1.02
TPM4-210ENST00000588507 NR2E1Q9Y466 385 aa8.65□□□□□ -1.02
TPM4-210ENST00000588507 DSPP15924 2871 aaKnown RBP8.65□□□□□ -1.03
TPM4-210ENST00000588507 IGSF10Q6WRI0 2623 aa8.65□□□□□ -1.03
TPM4-210ENST00000588507 SPTA1P02549 2419 aa8.64□□□□□ -1.03
TPM4-210ENST00000588507 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.64□□□□□ -1.03
TPM4-210ENST00000588507 SPTLC1O15269 473 aa8.64□□□□□ -1.03
TPM4-210ENST00000588507 IFIT1P09914 478 aaKnown RBP8.64□□□□□ -1.03
TPM4-210ENST00000588507 SP100P23497 879 aaPredicted RBP8.64□□□□□ -1.03
TPM4-210ENST00000588507 PDZD3Q86UT5 571 aa8.64□□□□□ -1.03
TPM4-210ENST00000588507 FOXP4Q8IVH2 680 aaPredicted RBP8.64□□□□□ -1.03
TPM4-210ENST00000588507 C11orf84Q9BUA3 381 aaPredicted RBP8.64□□□□□ -1.03
TPM4-210ENST00000588507 DHX36Q9H2U1 1008 aaKnown RBP8.64□□□□□ -1.03
TPM4-210ENST00000588507 PARD6AQ9NPB6 346 aa8.64□□□□□ -1.03
TPM4-210ENST00000588507 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.64□□□□□ -1.03
TPM4-210ENST00000588507 ATG2AQ2TAZ0 1938 aa8.64□□□□□ -1.03
TPM4-210ENST00000588507 TANC1Q9C0D5 1861 aa8.64□□□□□ -1.03
TPM4-210ENST00000588507 ASTN1O14525 1302 aa8.63□□□□□ -1.03
TPM4-210ENST00000588507 ANKRD17O75179 2603 aaKnown RBP8.63□□□□□ -1.03
TPM4-210ENST00000588507 NBEAQ8NFP9 2946 aa8.63□□□□□ -1.03
TPM4-210ENST00000588507 GPR75-ASB3A0A0A6YYF3 556 aa8.63□□□□□ -1.03
TPM4-210ENST00000588507 C5orf67F2Z3F1 127 aa8.63□□□□□ -1.03
TPM4-210ENST00000588507 PDE8BO95263 885 aa8.63□□□□□ -1.03
TPM4-210ENST00000588507 PARNO95453 639 aaKnown RBP8.63□□□□□ -1.03
TPM4-210ENST00000588507 MAP4K4O95819 1239 aaPredicted RBP8.63□□□□□ -1.03
TPM4-210ENST00000588507 GH2P01242 217 aa8.63□□□□□ -1.03
TPM4-210ENST00000588507 CXCL10P02778 98 aa8.63□□□□□ -1.03
TPM4-210ENST00000588507 AMHP03971 560 aa8.63□□□□□ -1.03
TPM4-210ENST00000588507 CTNNB1P35222 781 aa8.63□□□□□ -1.03
TPM4-210ENST00000588507 TNFAIP2Q03169 654 aa8.63□□□□□ -1.03
TPM4-210ENST00000588507 C19orf57Q0VDD7 668 aa8.63□□□□□ -1.03
TPM4-210ENST00000588507 GPNMBQ14956 572 aa8.63□□□□□ -1.03
TPM4-210ENST00000588507 TCTN1Q2MV58 587 aa8.63□□□□□ -1.03
TPM4-210ENST00000588507 METTL24Q5JXM2 366 aa8.63□□□□□ -1.03
TPM4-210ENST00000588507 DZIP1Q86YF9 867 aaKnown RBP8.63□□□□□ -1.03
TPM4-210ENST00000588507 GLIS3Q8NEA6 775 aa8.63□□□□□ -1.03
TPM4-210ENST00000588507 AFAP1L1Q8TED9 768 aa8.63□□□□□ -1.03
TPM4-210ENST00000588507 ZCCHC14Q8WYQ9 949 aaKnown RBP8.63□□□□□ -1.03
TPM4-210ENST00000588507 YME1L1Q96TA2 773 aa8.63□□□□□ -1.03
TPM4-210ENST00000588507 TANGO6Q9C0B7 1094 aa8.63□□□□□ -1.03
TPM4-210ENST00000588507 RNF216Q9NWF9 866 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms