RNA–Protein interactions for RNA: ENST00000588454.5

CALR-206, Transcript of calreticulin, humanhuman

TSL 3

Gene CALR, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-206ENST00000588454 ACAD9Q9H845 621 aa13.23□□□□□ -0.29
CALR-206ENST00000588454 MTMR4Q9NYA4 1195 aa13.23□□□□□ -0.29
CALR-206ENST00000588454 Q9Y3F1 56 aa13.23□□□□□ -0.29
CALR-206ENST00000588454 DYNC1LI2O43237 492 aaPredicted RBP13.22□□□□□ -0.29
CALR-206ENST00000588454 ZEB2O60315 1214 aa13.22□□□□□ -0.29
CALR-206ENST00000588454 B4GALT4O60513 344 aa13.22□□□□□ -0.29
CALR-206ENST00000588454 MYOGP15173 224 aa13.22□□□□□ -0.29
CALR-206ENST00000588454 SMPD1P17405 629 aa13.22□□□□□ -0.29
CALR-206ENST00000588454 TFF2Q03403 129 aa13.22□□□□□ -0.29
CALR-206ENST00000588454 AAK1Q2M2I8 961 aa13.22□□□□□ -0.29
CALR-206ENST00000588454 C20orf194Q5TEA3 1177 aa13.22□□□□□ -0.29
CALR-206ENST00000588454 PPP2R2DQ66LE6 453 aa13.22□□□□□ -0.29
CALR-206ENST00000588454 IQSEC1Q6DN90 963 aa13.22□□□□□ -0.29
CALR-206ENST00000588454 TLK2Q86UE8 772 aa13.22□□□□□ -0.29
CALR-206ENST00000588454 ZNF444Q8N0Y2 327 aaPredicted RBP13.22□□□□□ -0.29
CALR-206ENST00000588454 STK11IPQ8N1F8 1099 aa13.22□□□□□ -0.29
CALR-206ENST00000588454 CEP95Q96GE4 821 aa13.22□□□□□ -0.29
CALR-206ENST00000588454 AGBL1Q96MI9 1066 aa13.22□□□□□ -0.29
CALR-206ENST00000588454 AP5M1Q9H0R1 490 aa13.22□□□□□ -0.29
CALR-206ENST00000588454 A1CFQ9NQ94 594 aaKnown RBP13.22□□□□□ -0.29
CALR-206ENST00000588454 HOMER2Q9NSB8 354 aa13.22□□□□□ -0.29
CALR-206ENST00000588454 ZBTB40Q9NUA8 1239 aa13.22□□□□□ -0.29
CALR-206ENST00000588454 RCAN3Q9UKA8 241 aa13.22□□□□□ -0.29
CALR-206ENST00000588454 BRWD1Q9NSI6 2320 aa13.22□□□□□ -0.29
CALR-206ENST00000588454 ZNF536O15090 1300 aa13.21□□□□□ -0.29
CALR-206ENST00000588454 TMEM232C9JQI7 657 aa13.21□□□□□ -0.29
CALR-206ENST00000588454 ERC2O15083 957 aa13.21□□□□□ -0.29
CALR-206ENST00000588454 TTLL1O95922 423 aa13.21□□□□□ -0.29
CALR-206ENST00000588454 BMP3P12645 472 aa13.21□□□□□ -0.29
CALR-206ENST00000588454 TKFCQ3LXA3 575 aa13.21□□□□□ -0.29
CALR-206ENST00000588454 SLFN13Q68D06 897 aa13.21□□□□□ -0.29
CALR-206ENST00000588454 TAPT1Q6NXT6 567 aa13.21□□□□□ -0.29
CALR-206ENST00000588454 ZNF287Q9HBT7 754 aa13.21□□□□□ -0.29
CALR-206ENST00000588454 PDGFCQ9NRA1 345 aa13.21□□□□□ -0.29
CALR-206ENST00000588454 RNF146Q9NTX7 359 aa13.21□□□□□ -0.29
CALR-206ENST00000588454 COG6Q9Y2V7 657 aa13.21□□□□□ -0.29
CALR-206ENST00000588454 MTCH2Q9Y6C9 303 aa13.21□□□□□ -0.29
CALR-206ENST00000588454 ZBBXA8MT70 800 aa13.2□□□□□ -0.3
CALR-206ENST00000588454 PRDM1O75626 825 aa13.2□□□□□ -0.3
CALR-206ENST00000588454 PFKMP08237 780 aa13.2□□□□□ -0.3
CALR-206ENST00000588454 MS4A1P11836 297 aa13.2□□□□□ -0.3
CALR-206ENST00000588454 ATP2A2P16615 1042 aaKnown RBP13.2□□□□□ -0.3
CALR-206ENST00000588454 PTGS1P23219 599 aa13.2□□□□□ -0.3
CALR-206ENST00000588454 HOXD11P31277 338 aaPredicted RBP13.2□□□□□ -0.3
CALR-206ENST00000588454 KCNQ1P51787 676 aa13.2□□□□□ -0.3
CALR-206ENST00000588454 PSMC6P62333 389 aa13.2□□□□□ -0.3
CALR-206ENST00000588454 TTLL4Q14679 1199 aa13.2□□□□□ -0.3
CALR-206ENST00000588454 MICALL1Q8N3F8 863 aa13.2□□□□□ -0.3
CALR-206ENST00000588454 NEDD1Q8NHV4 660 aa13.2□□□□□ -0.3
CALR-206ENST00000588454 CHURC1Q8WUH1 139 aa13.2□□□□□ -0.3
CALR-206ENST00000588454 STAG1Q8WVM7 1258 aa13.2□□□□□ -0.3
CALR-206ENST00000588454 OSBP2Q969R2 916 aa13.2□□□□□ -0.3
CALR-206ENST00000588454 SCLYQ96I15 445 aa13.2□□□□□ -0.3
CALR-206ENST00000588454 TRERF1Q96PN7 1200 aa13.2□□□□□ -0.3
CALR-206ENST00000588454 ALDH8A1Q9H2A2 487 aaPredicted RBP13.2□□□□□ -0.3
CALR-206ENST00000588454 ARIH1Q9Y4X5 557 aaPredicted RBP13.2□□□□□ -0.3
CALR-206ENST00000588454 RFXAPO00287 272 aa13.19□□□□□ -0.3
CALR-206ENST00000588454 PLA2G6O60733 806 aa13.19□□□□□ -0.3
CALR-206ENST00000588454 STAT2P52630 851 aa13.19□□□□□ -0.3
CALR-206ENST00000588454 TMEM67Q5HYA8 995 aa13.19□□□□□ -0.3
CALR-206ENST00000588454 TMEM63BQ5T3F8 832 aa13.19□□□□□ -0.3
CALR-206ENST00000588454 FAM160B2Q86V87 743 aa13.19□□□□□ -0.3
CALR-206ENST00000588454 LRRC47Q8N1G4 583 aaKnown RBP13.19□□□□□ -0.3
CALR-206ENST00000588454 MORC4Q8TE76 937 aa13.19□□□□□ -0.3
CALR-206ENST00000588454 EPB41L4AQ9HCS5 686 aaPredicted RBP13.19□□□□□ -0.3
CALR-206ENST00000588454 COG5Q9UP83 839 aa13.19□□□□□ -0.3
CALR-206ENST00000588454 DDX49Q9Y6V7 483 aaKnown RBP13.19□□□□□ -0.3
CALR-206ENST00000588454 MUC6Q6W4X9 2439 aa13.19□□□□□ -0.3
CALR-206ENST00000588454 GTPBP6O43824 516 aaPredicted RBP13.18□□□□□ -0.3
CALR-206ENST00000588454 TLL1O43897 1013 aa13.18□□□□□ -0.3
CALR-206ENST00000588454 SUPT20HL2P0C7V6 817 aa13.18□□□□□ -0.3
CALR-206ENST00000588454 GNAT2P19087 354 aa13.18□□□□□ -0.3
CALR-206ENST00000588454 SKIV2LQ15477 1246 aaKnown RBP13.18□□□□□ -0.3
CALR-206ENST00000588454 PPP4R3CPQ6ZMV5 832 aa13.18□□□□□ -0.3
CALR-206ENST00000588454 KBTBD3Q8NAB2 608 aa13.18□□□□□ -0.3
CALR-206ENST00000588454 APPBP2Q92624 585 aa13.18□□□□□ -0.3
CALR-206ENST00000588454 GMCL1Q96IK5 515 aa13.18□□□□□ -0.3
CALR-206ENST00000588454 LRFN3Q9BTN0 628 aa13.18□□□□□ -0.3
CALR-206ENST00000588454 EPHX3Q9H6B9 360 aa13.18□□□□□ -0.3
CALR-206ENST00000588454 VTA1Q9NP79 307 aa13.18□□□□□ -0.3
CALR-206ENST00000588454 CYP39A1Q9NYL5 469 aa13.18□□□□□ -0.3
CALR-206ENST00000588454 DDX19BQ9UMR2 479 aa13.18□□□□□ -0.3
CALR-206ENST00000588454 SCN5AQ14524 2016 aa13.18□□□□□ -0.3
CALR-206ENST00000588454 PLIN4Q96Q06 1357 aa13.18□□□□□ -0.3
CALR-206ENST00000588454 LRRC37A2A6NM11 1700 aa13.17□□□□□ -0.3
CALR-206ENST00000588454 PATL2C9JE40 543 aaKnown RBP13.17□□□□□ -0.3
CALR-206ENST00000588454 RNF113AO15541 343 aaKnown RBP13.17□□□□□ -0.3
CALR-206ENST00000588454 GPAA1O43292 621 aa13.17□□□□□ -0.3
CALR-206ENST00000588454 CA3P07451 260 aa13.17□□□□□ -0.3
CALR-206ENST00000588454 TSPY3P0CV98 308 aa13.17□□□□□ -0.3
CALR-206ENST00000588454 TSPY8P0CW00 308 aa13.17□□□□□ -0.3
CALR-206ENST00000588454 CYP2C9P11712 490 aa13.17□□□□□ -0.3
CALR-206ENST00000588454 ALAS1P13196 640 aa13.17□□□□□ -0.3
CALR-206ENST00000588454 TDO2P48775 406 aa13.17□□□□□ -0.3
CALR-206ENST00000588454 DUSP28Q4G0W2 176 aa13.17□□□□□ -0.3
CALR-206ENST00000588454 MUM1L1Q5H9M0 696 aa13.17□□□□□ -0.3
CALR-206ENST00000588454 KIAA1211Q6ZU35 1233 aa13.17□□□□□ -0.3
CALR-206ENST00000588454 EEPD1Q7L9B9 569 aa13.17□□□□□ -0.3
CALR-206ENST00000588454 FBXO16Q8IX29 292 aaPredicted RBP13.17□□□□□ -0.3
CALR-206ENST00000588454 TET1Q8NFU7 2136 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms