RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 ZNF445P59923 1031 aa5.75□□□□□ -1.49
VPS4B-203ENST00000588323 SKOR2Q2VWA4 1001 aaPredicted RBP5.75□□□□□ -1.49
VPS4B-203ENST00000588323 AXDND1Q5T1B0 1012 aaPredicted RBP5.75□□□□□ -1.49
VPS4B-203ENST00000588323 PAQR3Q6TCH7 311 aa5.75□□□□□ -1.49
VPS4B-203ENST00000588323 DBX2Q6ZNG2 339 aa5.75□□□□□ -1.49
VPS4B-203ENST00000588323 PRRT2Q7Z6L0 340 aaPredicted RBP5.75□□□□□ -1.49
VPS4B-203ENST00000588323 PPFIBP1Q86W92 1011 aa5.75□□□□□ -1.49
VPS4B-203ENST00000588323 FIBCD1Q8N539 461 aa5.75□□□□□ -1.49
VPS4B-203ENST00000588323 SRRTQ9BXP5 876 aaKnown RBP5.75□□□□□ -1.49
VPS4B-203ENST00000588323 ADAM7Q9H2U9 754 aa5.75□□□□□ -1.49
VPS4B-203ENST00000588323 PDLIM7Q9NR12 457 aa5.75□□□□□ -1.49
VPS4B-203ENST00000588323 FAM86C1Q9NVL1 165 aa5.75□□□□□ -1.49
VPS4B-203ENST00000588323 SF3B6Q9Y3B4 125 aaKnown RBP5.75□□□□□ -1.49
VPS4B-203ENST00000588323 FHOD1Q9Y613 1164 aa5.75□□□□□ -1.49
VPS4B-203ENST00000588323 FGF10O15520 208 aaPredicted RBP5.74□□□□□ -1.49
VPS4B-203ENST00000588323 CAP1Q01518 475 aa5.74□□□□□ -1.49
VPS4B-203ENST00000588323 FRMD5Q7Z6J6 570 aa5.74□□□□□ -1.49
VPS4B-203ENST00000588323 USP48Q86UV5 1035 aa5.74□□□□□ -1.49
VPS4B-203ENST00000588323 TP53I13Q8NBR0 393 aaPredicted RBP5.74□□□□□ -1.49
VPS4B-203ENST00000588323 PTCHD1Q96NR3 888 aa5.74□□□□□ -1.49
VPS4B-203ENST00000588323 DBR1Q9UK59 544 aaKnown RBP5.74□□□□□ -1.49
VPS4B-203ENST00000588323 JAG2Q9Y219 1238 aa5.74□□□□□ -1.49
VPS4B-203ENST00000588323 FAN1Q9Y2M0 1017 aa5.74□□□□□ -1.49
VPS4B-203ENST00000588323 FFAR3O14843 346 aa5.73□□□□□ -1.49
VPS4B-203ENST00000588323 TBC1D8O95759 1140 aa5.73□□□□□ -1.49
VPS4B-203ENST00000588323 CD3EP07766 207 aa5.73□□□□□ -1.49
VPS4B-203ENST00000588323 ITGA4P13612 1032 aa5.73□□□□□ -1.49
VPS4B-203ENST00000588323 CD247P20963 164 aa5.73□□□□□ -1.49
VPS4B-203ENST00000588323 GUCY2CP25092 1073 aa5.73□□□□□ -1.49
VPS4B-203ENST00000588323 TACR1P25103 407 aa5.73□□□□□ -1.49
VPS4B-203ENST00000588323 KCNC1P48547 511 aa5.73□□□□□ -1.49
VPS4B-203ENST00000588323 CORO7P57737 925 aa5.73□□□□□ -1.49
VPS4B-203ENST00000588323 POU4F1Q01851 419 aa5.73□□□□□ -1.49
VPS4B-203ENST00000588323 ZYXQ15942 572 aaKnown RBP5.73□□□□□ -1.49
VPS4B-203ENST00000588323 UNC5AQ6ZN44 842 aa5.73□□□□□ -1.49
VPS4B-203ENST00000588323 RNF34Q969K3 372 aa5.73□□□□□ -1.49
VPS4B-203ENST00000588323 ZDHHC15Q96MV8 337 aa5.73□□□□□ -1.49
VPS4B-203ENST00000588323 FCRL3Q96P31 734 aaPredicted RBP5.73□□□□□ -1.49
VPS4B-203ENST00000588323 NOL6Q9H6R4 1146 aaKnown RBP5.73□□□□□ -1.49
VPS4B-203ENST00000588323 ZNF451Q9Y4E5 1061 aa5.73□□□□□ -1.49
VPS4B-203ENST00000588323 F8W031 263 aaPredicted RBP5.72□□□□□ -1.49
VPS4B-203ENST00000588323 IFNGR1P15260 489 aa5.72□□□□□ -1.49
VPS4B-203ENST00000588323 L1CAMP32004 1257 aa5.72□□□□□ -1.49
VPS4B-203ENST00000588323 SLURP1P55000 103 aa5.72□□□□□ -1.49
VPS4B-203ENST00000588323 PRR5P85299 388 aa5.72□□□□□ -1.49
VPS4B-203ENST00000588323 TCEAL1Q15170 157 aa5.72□□□□□ -1.49
VPS4B-203ENST00000588323 LSRQ86X29 649 aaPredicted RBP5.72□□□□□ -1.49
VPS4B-203ENST00000588323 SUSD2Q9UGT4 822 aa5.72□□□□□ -1.49
VPS4B-203ENST00000588323 PPT2Q9UMR5 302 aa5.72□□□□□ -1.49
VPS4B-203ENST00000588323 HCFC2Q9Y5Z7 792 aa5.72□□□□□ -1.49
VPS4B-203ENST00000588323 FBLN1P23142 703 aa5.71□□□□□ -1.5
VPS4B-203ENST00000588323 FOXO4P98177 505 aa5.71□□□□□ -1.5
VPS4B-203ENST00000588323 ZNF394Q53GI3 561 aa5.71□□□□□ -1.5
VPS4B-203ENST00000588323 LDLRAD1Q5T700 205 aa5.71□□□□□ -1.5
VPS4B-203ENST00000588323 RUFY4Q6ZNE9 571 aa5.71□□□□□ -1.5
VPS4B-203ENST00000588323 RBBP8NLQ8NC74 664 aaPredicted RBP5.71□□□□□ -1.5
VPS4B-203ENST00000588323 NLGN2Q8NFZ4 835 aa5.71□□□□□ -1.5
VPS4B-203ENST00000588323 FNIP1Q8TF40 1166 aa5.71□□□□□ -1.5
VPS4B-203ENST00000588323 BDH2Q9BUT1 245 aa5.71□□□□□ -1.5
VPS4B-203ENST00000588323 RNF38Q9H0F5 515 aa5.71□□□□□ -1.5
VPS4B-203ENST00000588323 DIS3Q9Y2L1 958 aaKnown RBP5.71□□□□□ -1.5
VPS4B-203ENST00000588323 PCDHGB7Q9Y5F8 929 aa5.71□□□□□ -1.5
VPS4B-203ENST00000588323 PMF1-BGLAPU3KQ54 211 aa5.71□□□□□ -1.5
VPS4B-203ENST00000588323 A0A087WZG4 1122 aa5.7□□□□□ -1.5
VPS4B-203ENST00000588323 NCAM1P13591 858 aa5.7□□□□□ -1.5
VPS4B-203ENST00000588323 PLP2Q04941 152 aa5.7□□□□□ -1.5
VPS4B-203ENST00000588323 PPP2R5DQ14738 602 aa5.7□□□□□ -1.5
VPS4B-203ENST00000588323 CABP7Q86V35 215 aa5.7□□□□□ -1.5
VPS4B-203ENST00000588323 BORCS6Q96GS4 357 aa5.7□□□□□ -1.5
VPS4B-203ENST00000588323 METTL5Q9NRN9 209 aaKnown RBP5.7□□□□□ -1.5
VPS4B-203ENST00000588323 ZNF214Q9UL59 606 aaPredicted RBP5.7□□□□□ -1.5
VPS4B-203ENST00000588323 PLA2G1BP04054 148 aaKnown RBP5.69□□□□□ -1.5
VPS4B-203ENST00000588323 ADRB1P08588 477 aa5.69□□□□□ -1.5
VPS4B-203ENST00000588323 ATF2P15336 505 aa5.69□□□□□ -1.5
VPS4B-203ENST00000588323 ZNF16P17020 682 aaPredicted RBP5.69□□□□□ -1.5
VPS4B-203ENST00000588323 FANCCQ00597 558 aa5.69□□□□□ -1.5
VPS4B-203ENST00000588323 VWA3BQ502W6 1294 aa5.69□□□□□ -1.5
VPS4B-203ENST00000588323 RCSD1Q6JBY9 416 aa5.69□□□□□ -1.5
VPS4B-203ENST00000588323 LIPIQ6XZB0 460 aa5.69□□□□□ -1.5
VPS4B-203ENST00000588323 ADGRG2Q8IZP9 1017 aa5.69□□□□□ -1.5
VPS4B-203ENST00000588323 ALG3Q92685 438 aa5.69□□□□□ -1.5
VPS4B-203ENST00000588323 CRBNQ96SW2 442 aa5.69□□□□□ -1.5
VPS4B-203ENST00000588323 BACH2Q9BYV9 841 aa5.69□□□□□ -1.5
VPS4B-203ENST00000588323 USP40Q9NVE5 1235 aa5.69□□□□□ -1.5
VPS4B-203ENST00000588323 WHRNQ9P202 907 aa5.69□□□□□ -1.5
VPS4B-203ENST00000588323 PLA2G2DQ9UNK4 145 aa5.69□□□□□ -1.5
VPS4B-203ENST00000588323 A0A1B0GTL3 188 aa5.68□□□□□ -1.5
VPS4B-203ENST00000588323 CBFA2T2O43439 604 aa5.68□□□□□ -1.5
VPS4B-203ENST00000588323 GLI4P10075 376 aa5.68□□□□□ -1.5
VPS4B-203ENST00000588323 NFKB2Q00653 900 aa5.68□□□□□ -1.5
VPS4B-203ENST00000588323 RTP5Q14D33 572 aa5.68□□□□□ -1.5
VPS4B-203ENST00000588323 GNPTABQ3T906 1256 aa5.68□□□□□ -1.5
VPS4B-203ENST00000588323 SPATS1Q496A3 300 aa5.68□□□□□ -1.5
VPS4B-203ENST00000588323 EEF1DP3Q658K8 133 aa5.68□□□□□ -1.5
VPS4B-203ENST00000588323 HEATR6Q6AI08 1181 aaKnown RBP5.68□□□□□ -1.5
VPS4B-203ENST00000588323 CCDC81Q6ZN84 652 aa5.68□□□□□ -1.5
VPS4B-203ENST00000588323 SAPCD2Q86UD0 394 aa5.68□□□□□ -1.5
VPS4B-203ENST00000588323 ADCY4Q8NFM4 1077 aa5.68□□□□□ -1.5
VPS4B-203ENST00000588323 HAUS7Q99871 368 aa5.68□□□□□ -1.5
VPS4B-203ENST00000588323 GBP3Q9H0R5 595 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms