RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 MUM1L1Q5H9M0 696 aa16.43■□□□□ 0.22
CLPTM1-208ENST00000588274 OTUD7AQ8TE49 926 aaPredicted RBP16.43■□□□□ 0.22
CLPTM1-208ENST00000588274 MORC4Q8TE76 937 aa16.43■□□□□ 0.22
CLPTM1-208ENST00000588274 NOC4LQ9BVI4 516 aaKnown RBP16.43■□□□□ 0.22
CLPTM1-208ENST00000588274 SPC25Q9HBM1 224 aa16.43■□□□□ 0.22
CLPTM1-208ENST00000588274 IL17RBQ9NRM6 502 aa16.43■□□□□ 0.22
CLPTM1-208ENST00000588274 CYP39A1Q9NYL5 469 aa16.43■□□□□ 0.22
CLPTM1-208ENST00000588274 RCAN3Q9UKA8 241 aa16.43■□□□□ 0.22
CLPTM1-208ENST00000588274 B4GALT4O60513 344 aa16.42■□□□□ 0.22
CLPTM1-208ENST00000588274 NMT2O60551 498 aa16.42■□□□□ 0.22
CLPTM1-208ENST00000588274 FDX1P10109 184 aa16.42■□□□□ 0.22
CLPTM1-208ENST00000588274 TFAP4Q01664 338 aa16.42■□□□□ 0.22
CLPTM1-208ENST00000588274 PPARAQ07869 468 aa16.42■□□□□ 0.22
CLPTM1-208ENST00000588274 FBXO16Q8IX29 292 aaPredicted RBP16.42■□□□□ 0.22
CLPTM1-208ENST00000588274 ZNF444Q8N0Y2 327 aaPredicted RBP16.42■□□□□ 0.22
CLPTM1-208ENST00000588274 STAG1Q8WVM7 1258 aa16.42■□□□□ 0.22
CLPTM1-208ENST00000588274 PURBQ96QR8 312 aaKnown RBP16.42■□□□□ 0.22
CLPTM1-208ENST00000588274 HIPK3Q9H422 1215 aa16.42■□□□□ 0.22
CLPTM1-208ENST00000588274 CHMP4BQ9H444 224 aaKnown RBP16.42■□□□□ 0.22
CLPTM1-208ENST00000588274 SALL3Q9BXA9 1300 aa16.42■□□□□ 0.22
CLPTM1-208ENST00000588274 TSPY3P0CV98 308 aa16.41■□□□□ 0.22
CLPTM1-208ENST00000588274 TSPY8P0CW00 308 aa16.41■□□□□ 0.22
CLPTM1-208ENST00000588274 SNAP25P60880 206 aa16.41■□□□□ 0.22
CLPTM1-208ENST00000588274 ITGA7Q13683 1181 aa16.41■□□□□ 0.22
CLPTM1-208ENST00000588274 FSCN1Q16658 493 aaKnown RBP16.41■□□□□ 0.22
CLPTM1-208ENST00000588274 ZMYM1Q5SVZ6 1142 aa16.41■□□□□ 0.22
CLPTM1-208ENST00000588274 CCDC174Q6PII3 467 aa16.41■□□□□ 0.22
CLPTM1-208ENST00000588274 FAM160B2Q86V87 743 aa16.41■□□□□ 0.22
CLPTM1-208ENST00000588274 TRPV6Q9H1D0 765 aa16.41■□□□□ 0.22
CLPTM1-208ENST00000588274 ZNF287Q9HBT7 754 aa16.41■□□□□ 0.22
CLPTM1-208ENST00000588274 PRR12Q9ULL5 1215 aa16.41■□□□□ 0.22
CLPTM1-208ENST00000588274 ASB14A6NK59 587 aa16.4■□□□□ 0.22
CLPTM1-208ENST00000588274 TNFRSF10AO00220 468 aa16.4■□□□□ 0.22
CLPTM1-208ENST00000588274 TLR3O15455 904 aaKnown RBP16.4■□□□□ 0.22
CLPTM1-208ENST00000588274 CABYRO75952 493 aa16.4■□□□□ 0.22
CLPTM1-208ENST00000588274 MCCP23508 829 aa16.4■□□□□ 0.22
CLPTM1-208ENST00000588274 SLC1A4P43007 532 aa16.4■□□□□ 0.22
CLPTM1-208ENST00000588274 PSMC6P62333 389 aa16.4■□□□□ 0.22
CLPTM1-208ENST00000588274 TKFCQ3LXA3 575 aa16.4■□□□□ 0.22
CLPTM1-208ENST00000588274 KCTD1Q719H9 257 aa16.4■□□□□ 0.22
CLPTM1-208ENST00000588274 ATXN2LQ8WWM7 1075 aaKnown RBP16.4■□□□□ 0.22
CLPTM1-208ENST00000588274 TRERF1Q96PN7 1200 aa16.4■□□□□ 0.22
CLPTM1-208ENST00000588274 NKX2-4Q9H2Z4 354 aa16.4■□□□□ 0.22
CLPTM1-208ENST00000588274 INCENPQ9NQS7 918 aa16.4■□□□□ 0.22
CLPTM1-208ENST00000588274 TTC41PQ6P2S7 1318 aa16.4■□□□□ 0.22
CLPTM1-208ENST00000588274 TANC1Q9C0D5 1861 aa16.39■□□□□ 0.22
CLPTM1-208ENST00000588274 SCN10AQ9Y5Y9 1956 aa16.39■□□□□ 0.21
CLPTM1-208ENST00000588274 APPP05067 770 aa16.39■□□□□ 0.21
CLPTM1-208ENST00000588274 CCL23P55773 120 aa16.39■□□□□ 0.21
CLPTM1-208ENST00000588274 PDE4BQ07343 736 aa16.39■□□□□ 0.21
CLPTM1-208ENST00000588274 RAB30Q15771 203 aa16.39■□□□□ 0.21
CLPTM1-208ENST00000588274 CCDC129Q6ZRS4 1044 aa16.39■□□□□ 0.21
CLPTM1-208ENST00000588274 VTI1AQ96AJ9 217 aa16.39■□□□□ 0.21
CLPTM1-208ENST00000588274 CHMP4CQ96CF2 233 aa16.39■□□□□ 0.21
CLPTM1-208ENST00000588274 ASB2Q96Q27 587 aa16.39■□□□□ 0.21
CLPTM1-208ENST00000588274 GAS2L1Q99501 681 aaPredicted RBP16.39■□□□□ 0.21
CLPTM1-208ENST00000588274 THEGQ9P2T0 379 aa16.39■□□□□ 0.21
CLPTM1-208ENST00000588274 Q9Y3F1 56 aa16.39■□□□□ 0.21
CLPTM1-208ENST00000588274 CTDP1Q9Y5B0 961 aaPredicted RBP16.39■□□□□ 0.21
CLPTM1-208ENST00000588274 DYNC1LI2O43237 492 aaPredicted RBP16.38■□□□□ 0.21
CLPTM1-208ENST00000588274 ALAS1P13196 640 aa16.38■□□□□ 0.21
CLPTM1-208ENST00000588274 RCSD1Q6JBY9 416 aa16.38■□□□□ 0.21
CLPTM1-208ENST00000588274 EEPD1Q7L9B9 569 aa16.38■□□□□ 0.21
CLPTM1-208ENST00000588274 OTOP2Q7RTS6 562 aa16.38■□□□□ 0.21
CLPTM1-208ENST00000588274 CHURC1Q8WUH1 139 aa16.38■□□□□ 0.21
CLPTM1-208ENST00000588274 GPATCH3Q96I76 525 aa16.38■□□□□ 0.21
CLPTM1-208ENST00000588274 NAPBQ9H115 298 aa16.38■□□□□ 0.21
CLPTM1-208ENST00000588274 ALDH8A1Q9H2A2 487 aaPredicted RBP16.38■□□□□ 0.21
CLPTM1-208ENST00000588274 RANBP17Q9H2T7 1088 aaKnown RBP16.38■□□□□ 0.21
CLPTM1-208ENST00000588274 NCOR1O75376 2440 aa16.38■□□□□ 0.21
CLPTM1-208ENST00000588274 FGBP02675 491 aa16.37■□□□□ 0.21
CLPTM1-208ENST00000588274 ICAM1P05362 532 aa16.37■□□□□ 0.21
CLPTM1-208ENST00000588274 FGRP09769 529 aa16.37■□□□□ 0.21
CLPTM1-208ENST00000588274 MYOGP15173 224 aa16.37■□□□□ 0.21
CLPTM1-208ENST00000588274 RABGGTBP53611 331 aa16.37■□□□□ 0.21
CLPTM1-208ENST00000588274 CTDSPL2Q05D32 466 aa16.37■□□□□ 0.21
CLPTM1-208ENST00000588274 VPS53Q5VIR6 699 aa16.37■□□□□ 0.21
CLPTM1-208ENST00000588274 IQSEC1Q6DN90 963 aa16.37■□□□□ 0.21
CLPTM1-208ENST00000588274 PPM1EQ8WY54 764 aa16.37■□□□□ 0.21
CLPTM1-208ENST00000588274 SCLYQ96I15 445 aa16.37■□□□□ 0.21
CLPTM1-208ENST00000588274 NACAP1Q9BZK3 213 aa16.37■□□□□ 0.21
CLPTM1-208ENST00000588274 VTA1Q9NP79 307 aa16.37■□□□□ 0.21
CLPTM1-208ENST00000588274 ANAPC4Q9UJX5 808 aa16.37■□□□□ 0.21
CLPTM1-208ENST00000588274 STX8Q9UNK0 236 aa16.37■□□□□ 0.21
CLPTM1-208ENST00000588274 SCN5AQ14524 2016 aa16.36■□□□□ 0.21
CLPTM1-208ENST00000588274 RBM47A0AV96 593 aaKnown RBP16.36■□□□□ 0.21
CLPTM1-208ENST00000588274 NFIBO00712 420 aa16.36■□□□□ 0.21
CLPTM1-208ENST00000588274 PURAQ00577 322 aaKnown RBP16.36■□□□□ 0.21
CLPTM1-208ENST00000588274 DUSP28Q4G0W2 176 aa16.36■□□□□ 0.21
CLPTM1-208ENST00000588274 DIEXFQ68CQ4 756 aaKnown RBP16.36■□□□□ 0.21
CLPTM1-208ENST00000588274 BTNL9Q6UXG8 535 aa16.36■□□□□ 0.21
CLPTM1-208ENST00000588274 ADAMTS19Q8TE59 1207 aa16.36■□□□□ 0.21
CLPTM1-208ENST00000588274 SEZ6LQ9BYH1 1024 aa16.36■□□□□ 0.21
CLPTM1-208ENST00000588274 TRMT13Q9NUP7 481 aaKnown RBP16.36■□□□□ 0.21
CLPTM1-208ENST00000588274 MSRAQ9UJ68 235 aa16.36■□□□□ 0.21
CLPTM1-208ENST00000588274 PCDHB15Q9Y5E8 787 aa16.36■□□□□ 0.21
CLPTM1-208ENST00000588274 MYO9BQ13459 2157 aa16.36■□□□□ 0.21
CLPTM1-208ENST00000588274 ORC4O43929 436 aa16.35■□□□□ 0.21
CLPTM1-208ENST00000588274 ARHGEF15O94989 841 aa16.35■□□□□ 0.21
CLPTM1-208ENST00000588274 ALDH5A1P51649 535 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms