RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 PDHBP11177 359 aa16.89■□□□□ 0.29
VMP1-206ENST00000587945 CST5P28325 142 aaPredicted RBP16.89■□□□□ 0.29
VMP1-206ENST00000587945 MFAP1P55081 439 aaKnown RBP16.89■□□□□ 0.29
VMP1-206ENST00000587945 GJA9P57773 515 aa16.89■□□□□ 0.29
VMP1-206ENST00000587945 FAAP100Q0VG06 881 aa16.89■□□□□ 0.29
VMP1-206ENST00000587945 NOL8Q76FK4 1167 aaKnown RBP16.89■□□□□ 0.29
VMP1-206ENST00000587945 EEPD1Q7L9B9 569 aa16.89■□□□□ 0.29
VMP1-206ENST00000587945 NUP133Q8WUM0 1156 aa16.89■□□□□ 0.29
VMP1-206ENST00000587945 VTI1AQ96AJ9 217 aa16.89■□□□□ 0.29
VMP1-206ENST00000587945 ZKSCAN3Q9BRR0 538 aa16.89■□□□□ 0.29
VMP1-206ENST00000587945 UPF3AQ9H1J1 476 aaKnown RBP16.89■□□□□ 0.29
VMP1-206ENST00000587945 SPC25Q9HBM1 224 aa16.89■□□□□ 0.29
VMP1-206ENST00000587945 DIAPH3Q9NSV4 1193 aa16.89■□□□□ 0.29
VMP1-206ENST00000587945 TMEM39AQ9NV64 488 aa16.89■□□□□ 0.29
VMP1-206ENST00000587945 SUPT16HQ9Y5B9 1047 aaKnown RBP16.89■□□□□ 0.29
VMP1-206ENST00000587945 ASB14A6NK59 587 aa16.88■□□□□ 0.29
VMP1-206ENST00000587945 NFIBO00712 420 aa16.88■□□□□ 0.29
VMP1-206ENST00000587945 ZNF213O14771 459 aa16.88■□□□□ 0.29
VMP1-206ENST00000587945 KIAA0355O15063 1070 aa16.88■□□□□ 0.29
VMP1-206ENST00000587945 CTAGE5O15320 804 aa16.88■□□□□ 0.29
VMP1-206ENST00000587945 RAG1P15918 1043 aa16.88■□□□□ 0.29
VMP1-206ENST00000587945 EPHB4P54760 987 aa16.88■□□□□ 0.29
VMP1-206ENST00000587945 BEX3Q00994 111 aa16.88■□□□□ 0.29
VMP1-206ENST00000587945 TNFAIP2Q03169 654 aa16.88■□□□□ 0.29
VMP1-206ENST00000587945 BAATQ14032 418 aaPredicted RBP16.88■□□□□ 0.29
VMP1-206ENST00000587945 GNASQ5JWF2 1037 aa16.88■□□□□ 0.29
VMP1-206ENST00000587945 TMEM63BQ5T3F8 832 aa16.88■□□□□ 0.29
VMP1-206ENST00000587945 ANKRD33Q7Z3H0 272 aa16.88■□□□□ 0.29
VMP1-206ENST00000587945 GLT1D1Q96MS3 346 aa16.88■□□□□ 0.29
VMP1-206ENST00000587945 RNF41Q9H4P4 317 aaPredicted RBP16.88■□□□□ 0.29
VMP1-206ENST00000587945 PDGFCQ9NRA1 345 aa16.88■□□□□ 0.29
VMP1-206ENST00000587945 PLXNA1Q9UIW2 1896 aa16.87■□□□□ 0.29
VMP1-206ENST00000587945 DCDC2CA8MYV0 355 aa16.87■□□□□ 0.29
VMP1-206ENST00000587945 PCP11498 1178 aaKnown RBP16.87■□□□□ 0.29
VMP1-206ENST00000587945 ZNF543Q08ER8 600 aa16.87■□□□□ 0.29
VMP1-206ENST00000587945 FBXO16Q8IX29 292 aaPredicted RBP16.87■□□□□ 0.29
VMP1-206ENST00000587945 PCSK9Q8NBP7 692 aaKnown RBP16.87■□□□□ 0.29
VMP1-206ENST00000587945 ESR2Q92731 530 aa16.87■□□□□ 0.29
VMP1-206ENST00000587945 FAM161BQ96MY7 647 aa16.87■□□□□ 0.29
VMP1-206ENST00000587945 TTC14Q96N46 770 aa16.87■□□□□ 0.29
VMP1-206ENST00000587945 TOX2Q96NM4 488 aa16.87■□□□□ 0.29
VMP1-206ENST00000587945 GOLGA8HP0CJ92 632 aa16.86■□□□□ 0.29
VMP1-206ENST00000587945 SNHG28P0DPA3 235 aa16.86■□□□□ 0.29
VMP1-206ENST00000587945 SMPD1P17405 629 aa16.86■□□□□ 0.29
VMP1-206ENST00000587945 TAPT1Q6NXT6 567 aa16.86■□□□□ 0.29
VMP1-206ENST00000587945 CLEC4DQ8WXI8 215 aa16.86■□□□□ 0.29
VMP1-206ENST00000587945 CPVLQ9H3G5 476 aa16.86■□□□□ 0.29
VMP1-206ENST00000587945 GNEQ9Y223 722 aaKnown RBP16.86■□□□□ 0.29
VMP1-206ENST00000587945 ELP1O95163 1332 aa16.86■□□□□ 0.29
VMP1-206ENST00000587945 PTPDC1A2A3K4 754 aa16.85■□□□□ 0.29
VMP1-206ENST00000587945 B4E1Z4 1266 aa16.85■□□□□ 0.29
VMP1-206ENST00000587945 DYNC1LI2O43237 492 aaPredicted RBP16.85■□□□□ 0.29
VMP1-206ENST00000587945 KDM4AO75164 1064 aa16.85■□□□□ 0.29
VMP1-206ENST00000587945 PDE4AP27815 886 aa16.85■□□□□ 0.29
VMP1-206ENST00000587945 CDK7P50613 346 aa16.85■□□□□ 0.29
VMP1-206ENST00000587945 SLC30A10Q6XR72 485 aa16.85■□□□□ 0.29
VMP1-206ENST00000587945 TLK2Q86UE8 772 aa16.85■□□□□ 0.29
VMP1-206ENST00000587945 SLC17A8Q8NDX2 589 aa16.85■□□□□ 0.29
VMP1-206ENST00000587945 IL25Q9H293 177 aa16.85■□□□□ 0.29
VMP1-206ENST00000587945 A0A0U1RQG5 324 aaPredicted RBP16.84■□□□□ 0.29
VMP1-206ENST00000587945 ARVCFO00192 962 aa16.84■□□□□ 0.29
VMP1-206ENST00000587945 HIP1O00291 1037 aa16.84■□□□□ 0.29
VMP1-206ENST00000587945 CALML3P27482 149 aa16.84■□□□□ 0.29
VMP1-206ENST00000587945 NKX3-2P78367 333 aa16.84■□□□□ 0.29
VMP1-206ENST00000587945 IRX6P78412 446 aaPredicted RBP16.84■□□□□ 0.29
VMP1-206ENST00000587945 CXCL17Q6UXB2 119 aa16.84■□□□□ 0.29
VMP1-206ENST00000587945 UBA5Q9GZZ9 404 aa16.84■□□□□ 0.29
VMP1-206ENST00000587945 AP5M1Q9H0R1 490 aa16.84■□□□□ 0.29
VMP1-206ENST00000587945 TBX21Q9UL17 535 aa16.84■□□□□ 0.29
VMP1-206ENST00000587945 STXBP5LQ9Y2K9 1186 aa16.84■□□□□ 0.29
VMP1-206ENST00000587945 COL6A3P12111 3177 aa16.84■□□□□ 0.29
VMP1-206ENST00000587945 ALDH5A1P51649 535 aaPredicted RBP16.83■□□□□ 0.28
VMP1-206ENST00000587945 FPGSQ05932 587 aa16.83■□□□□ 0.28
VMP1-206ENST00000587945 FSCN1Q16658 493 aaKnown RBP16.83■□□□□ 0.28
VMP1-206ENST00000587945 IQSEC1Q6DN90 963 aa16.83■□□□□ 0.28
VMP1-206ENST00000587945 FAM109BQ6ICB4 259 aaPredicted RBP16.83■□□□□ 0.28
VMP1-206ENST00000587945 KIAA1211Q6ZU35 1233 aa16.83■□□□□ 0.28
VMP1-206ENST00000587945 DGKHQ86XP1 1220 aa16.83■□□□□ 0.28
VMP1-206ENST00000587945 MORC4Q8TE76 937 aa16.83■□□□□ 0.28
VMP1-206ENST00000587945 GUCD1Q96NT3 240 aa16.83■□□□□ 0.28
VMP1-206ENST00000587945 DSCC1Q9BVC3 393 aa16.83■□□□□ 0.28
VMP1-206ENST00000587945 LTBP2Q14767 1821 aa16.82■□□□□ 0.28
VMP1-206ENST00000587945 MROH7Q68CQ1 1323 aa16.82■□□□□ 0.28
VMP1-206ENST00000587945 TIMP1P01033 207 aa16.82■□□□□ 0.28
VMP1-206ENST00000587945 GSPT1P15170 499 aaKnown RBP16.82■□□□□ 0.28
VMP1-206ENST00000587945 IMMTQ16891 758 aaKnown RBP16.82■□□□□ 0.28
VMP1-206ENST00000587945 USH1GQ495M9 461 aa16.82■□□□□ 0.28
VMP1-206ENST00000587945 RNF207Q6ZRF8 634 aa16.82■□□□□ 0.28
VMP1-206ENST00000587945 IQCA1Q86XH1 822 aa16.82■□□□□ 0.28
VMP1-206ENST00000587945 FAM126BQ8IXS8 530 aa16.82■□□□□ 0.28
VMP1-206ENST00000587945 PNMA1Q8ND90 353 aa16.82■□□□□ 0.28
VMP1-206ENST00000587945 RNPC3Q96LT9 517 aaKnown RBP16.82■□□□□ 0.28
VMP1-206ENST00000587945 ZSCAN10Q96SZ4 725 aaPredicted RBP16.82■□□□□ 0.28
VMP1-206ENST00000587945 VTA1Q9NP79 307 aa16.82■□□□□ 0.28
VMP1-206ENST00000587945 ZSWIM5Q9P217 1185 aa16.82■□□□□ 0.28
VMP1-206ENST00000587945 ADD3Q9UEY8 706 aaKnown RBP16.82■□□□□ 0.28
VMP1-206ENST00000587945 LAMA2P24043 3122 aaKnown RBP16.81■□□□□ 0.28
VMP1-206ENST00000587945 GRIN2DO15399 1336 aa16.81■□□□□ 0.28
VMP1-206ENST00000587945 RPS6P62753 249 aaKnown RBP16.81■□□□□ 0.28
VMP1-206ENST00000587945 GPATCH4Q5T3I0 446 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms