RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 SLC16A2P36021 539 aa16.74■□□□□ 0.27
ERCC1-205ENST00000587888 RRP12Q5JTH9 1297 aaKnown RBP16.74■□□□□ 0.27
ERCC1-205ENST00000587888 TTBK2Q6IQ55 1244 aa16.74■□□□□ 0.27
ERCC1-205ENST00000587888 CXCL17Q6UXB2 119 aa16.74■□□□□ 0.27
ERCC1-205ENST00000587888 NSMFQ6X4W1 530 aa16.74■□□□□ 0.27
ERCC1-205ENST00000587888 C16orf59Q7L2K0 433 aa16.74■□□□□ 0.27
ERCC1-205ENST00000587888 PURBQ96QR8 312 aaKnown RBP16.74■□□□□ 0.27
ERCC1-205ENST00000587888 AP5M1Q9H0R1 490 aa16.74■□□□□ 0.27
ERCC1-205ENST00000587888 PDGFCQ9NRA1 345 aa16.74■□□□□ 0.27
ERCC1-205ENST00000587888 CCPG1Q9ULG6 757 aa16.74■□□□□ 0.27
ERCC1-205ENST00000587888 ASTN1O14525 1302 aa16.73■□□□□ 0.27
ERCC1-205ENST00000587888 SALL3Q9BXA9 1300 aa16.73■□□□□ 0.27
ERCC1-205ENST00000587888 ACRP10323 421 aa16.73■□□□□ 0.27
ERCC1-205ENST00000587888 SMPD1P17405 629 aa16.73■□□□□ 0.27
ERCC1-205ENST00000587888 PPIGQ13427 754 aaKnown RBP eCLIP16.73■□□□□ 0.273e-7■■■■■ 28.4
ERCC1-205ENST00000587888 FAM126BQ8IXS8 530 aa16.73■□□□□ 0.27
ERCC1-205ENST00000587888 TMEM199Q8N511 208 aa16.73■□□□□ 0.27
ERCC1-205ENST00000587888 FAM227BQ96M60 508 aa16.73■□□□□ 0.27
ERCC1-205ENST00000587888 CRBNQ96SW2 442 aa16.73■□□□□ 0.27
ERCC1-205ENST00000587888 GPCPD1Q9NPB8 672 aa16.73■□□□□ 0.27
ERCC1-205ENST00000587888 HELLSQ9NRZ9 838 aa16.73■□□□□ 0.27
ERCC1-205ENST00000587888 CYP39A1Q9NYL5 469 aa16.73■□□□□ 0.27
ERCC1-205ENST00000587888 ANAPC4Q9UJX5 808 aa16.73■□□□□ 0.27
ERCC1-205ENST00000587888 GNEQ9Y223 722 aaKnown RBP16.73■□□□□ 0.27
ERCC1-205ENST00000587888 FGAP02671 866 aa16.72■□□□□ 0.27
ERCC1-205ENST00000587888 DNAJB2P25686 324 aa16.72■□□□□ 0.27
ERCC1-205ENST00000587888 CYP2C18P33260 490 aa16.72■□□□□ 0.27
ERCC1-205ENST00000587888 PDE1AP54750 535 aa16.72■□□□□ 0.27
ERCC1-205ENST00000587888 RRP1P56182 461 aaKnown RBP16.72■□□□□ 0.27
ERCC1-205ENST00000587888 GRIN2CQ14957 1233 aa16.72■□□□□ 0.27
ERCC1-205ENST00000587888 FSCN1Q16658 493 aaKnown RBP16.72■□□□□ 0.27
ERCC1-205ENST00000587888 TMEM240Q5SV17 173 aa16.72■□□□□ 0.27
ERCC1-205ENST00000587888 TMEM63BQ5T3F8 832 aa16.72■□□□□ 0.27
ERCC1-205ENST00000587888 IQSEC1Q6DN90 963 aa16.72■□□□□ 0.27
ERCC1-205ENST00000587888 ZNF365Q70YC5 407 aa16.72■□□□□ 0.27
ERCC1-205ENST00000587888 TLK2Q86UE8 772 aa16.72■□□□□ 0.27
ERCC1-205ENST00000587888 FBXO16Q8IX29 292 aaPredicted RBP16.72■□□□□ 0.27
ERCC1-205ENST00000587888 DCAF4Q8WV16 495 aa16.72■□□□□ 0.27
ERCC1-205ENST00000587888 FRMPD2Q68DX3 1309 aaPredicted RBP16.71■□□□□ 0.27
ERCC1-205ENST00000587888 GRXCR1A8MXD5 290 aa16.71■□□□□ 0.27
ERCC1-205ENST00000587888 ORC4O43929 436 aa16.71■□□□□ 0.27
ERCC1-205ENST00000587888 CD4P01730 458 aa16.71■□□□□ 0.27
ERCC1-205ENST00000587888 ICAM1P05362 532 aa16.71■□□□□ 0.27
ERCC1-205ENST00000587888 NKX3-2P78367 333 aa16.71■□□□□ 0.27
ERCC1-205ENST00000587888 ITGA7Q13683 1181 aa16.71■□□□□ 0.27
ERCC1-205ENST00000587888 BAATQ14032 418 aaPredicted RBP16.71■□□□□ 0.27
ERCC1-205ENST00000587888 ALX1Q15699 326 aa16.71■□□□□ 0.27
ERCC1-205ENST00000587888 MCMDC2Q4G0Z9 681 aa16.71■□□□□ 0.27
ERCC1-205ENST00000587888 TAPT1Q6NXT6 567 aa16.71■□□□□ 0.27
ERCC1-205ENST00000587888 KIAA1211Q6ZU35 1233 aa16.71■□□□□ 0.27
ERCC1-205ENST00000587888 TMEM47Q9BQJ4 181 aa16.71■□□□□ 0.27
ERCC1-205ENST00000587888 TMEM265A0A087WTH1 108 aa16.7■□□□□ 0.26
ERCC1-205ENST00000587888 A0A0D9SFI3 127 aa16.7■□□□□ 0.26
ERCC1-205ENST00000587888 ZEB2O60315 1214 aa16.7■□□□□ 0.26
ERCC1-205ENST00000587888 CABYRO75952 493 aa16.7■□□□□ 0.26
ERCC1-205ENST00000587888 NOVP48745 357 aa16.7■□□□□ 0.26
ERCC1-205ENST00000587888 PSMC6P62333 389 aa16.7■□□□□ 0.26
ERCC1-205ENST00000587888 TIFAQ96CG3 184 aa16.7■□□□□ 0.26
ERCC1-205ENST00000587888 ZNF576Q9H609 170 aa16.7■□□□□ 0.26
ERCC1-205ENST00000587888 PTPDC1A2A3K4 754 aa16.69■□□□□ 0.26
ERCC1-205ENST00000587888 TRIM6-TRIM34B2RNG4 842 aa16.69■□□□□ 0.26
ERCC1-205ENST00000587888 FGRP09769 529 aa16.69■□□□□ 0.26
ERCC1-205ENST00000587888 HSPD1P10809 573 aaKnown RBP16.69■□□□□ 0.26
ERCC1-205ENST00000587888 TOP1P11387 765 aaKnown RBP16.69■□□□□ 0.26
ERCC1-205ENST00000587888 PBX2P40425 430 aa16.69■□□□□ 0.26
ERCC1-205ENST00000587888 HAND2P61296 217 aa16.69■□□□□ 0.26
ERCC1-205ENST00000587888 SYDE2Q5VT97 1194 aa16.69■□□□□ 0.26
ERCC1-205ENST00000587888 SLC43A3Q8NBI5 491 aa16.69■□□□□ 0.26
ERCC1-205ENST00000587888 RILPL2Q969X0 211 aa16.69■□□□□ 0.26
ERCC1-205ENST00000587888 TRPV6Q9H1D0 765 aa16.69■□□□□ 0.26
ERCC1-205ENST00000587888 RANBP17Q9H2T7 1088 aaKnown RBP16.69■□□□□ 0.26
ERCC1-205ENST00000587888 HIPK3Q9H422 1215 aa16.69■□□□□ 0.26
ERCC1-205ENST00000587888 GRIN2DO15399 1336 aa16.69■□□□□ 0.26
ERCC1-205ENST00000587888 NFIBO00712 420 aa16.68■□□□□ 0.26
ERCC1-205ENST00000587888 FGBP02675 491 aa16.68■□□□□ 0.26
ERCC1-205ENST00000587888 CALML3P27482 149 aa16.68■□□□□ 0.26
ERCC1-205ENST00000587888 CCL23P55773 120 aa16.68■□□□□ 0.26
ERCC1-205ENST00000587888 NMIQ13287 307 aaPredicted RBP16.68■□□□□ 0.26
ERCC1-205ENST00000587888 BTNL9Q6UXG8 535 aa16.68■□□□□ 0.26
ERCC1-205ENST00000587888 PBX4Q9BYU1 374 aa16.68■□□□□ 0.26
ERCC1-205ENST00000587888 VTA1Q9NP79 307 aa16.68■□□□□ 0.26
ERCC1-205ENST00000587888 IL23AQ9NPF7 189 aa16.68■□□□□ 0.26
ERCC1-205ENST00000587888 TCP11L1Q9NUJ3 509 aa16.68■□□□□ 0.26
ERCC1-205ENST00000587888 Q9Y3F1 56 aa16.68■□□□□ 0.26
ERCC1-205ENST00000587888 UMODL1Q5DID0 1318 aa16.68■□□□□ 0.26
ERCC1-205ENST00000587888 B4GALT4O60513 344 aa16.67■□□□□ 0.26
ERCC1-205ENST00000587888 ALDH5A1P51649 535 aaPredicted RBP16.67■□□□□ 0.26
ERCC1-205ENST00000587888 HDAC1Q13547 482 aaPredicted RBP16.67■□□□□ 0.26
ERCC1-205ENST00000587888 PSRC1Q6PGN9 363 aaPredicted RBP16.67■□□□□ 0.26
ERCC1-205ENST00000587888 ZNF589Q86UQ0 364 aaPredicted RBP16.67■□□□□ 0.26
ERCC1-205ENST00000587888 PPM1EQ8WY54 764 aa16.67■□□□□ 0.26
ERCC1-205ENST00000587888 WDR11Q9BZH6 1224 aa16.67■□□□□ 0.26
ERCC1-205ENST00000587888 LNPKQ9C0E8 428 aa16.67■□□□□ 0.26
ERCC1-205ENST00000587888 ADD3Q9UEY8 706 aaKnown RBP16.67■□□□□ 0.26
ERCC1-205ENST00000587888 DUSP28Q4G0W2 176 aa16.66■□□□□ 0.26
ERCC1-205ENST00000587888 RASIP1Q5U651 963 aa16.66■□□□□ 0.26
ERCC1-205ENST00000587888 B4GALNT3Q6L9W6 998 aa16.66■□□□□ 0.26
ERCC1-205ENST00000587888 MFSD6Q6ZSS7 791 aa16.66■□□□□ 0.26
ERCC1-205ENST00000587888 OTOP2Q7RTS6 562 aa16.66■□□□□ 0.26
ERCC1-205ENST00000587888 MORC4Q8TE76 937 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms