RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 GJA9P57773 515 aa17.96■□□□□ 0.47
PRKCSH-204ENST00000587290 FPGSQ05932 587 aa17.96■□□□□ 0.47
PRKCSH-204ENST00000587290 NSMFQ6X4W1 530 aa17.96■□□□□ 0.47
PRKCSH-204ENST00000587290 NOL8Q76FK4 1167 aaKnown RBP17.96■□□□□ 0.47
PRKCSH-204ENST00000587290 FBXO16Q8IX29 292 aaPredicted RBP17.96■□□□□ 0.47
PRKCSH-204ENST00000587290 GLT1D1Q96MS3 346 aa17.96■□□□□ 0.47
PRKCSH-204ENST00000587290 CDX2Q99626 313 aaPredicted RBP17.96■□□□□ 0.47
PRKCSH-204ENST00000587290 GPCPD1Q9NPB8 672 aa17.96■□□□□ 0.47
PRKCSH-204ENST00000587290 PDGFCQ9NRA1 345 aa17.96■□□□□ 0.47
PRKCSH-204ENST00000587290 TBX21Q9UL17 535 aa17.96■□□□□ 0.47
PRKCSH-204ENST00000587290 GBF1Q92538 1859 aa17.95■□□□□ 0.46
PRKCSH-204ENST00000587290 TRIM6-TRIM34B2RNG4 842 aa17.95■□□□□ 0.46
PRKCSH-204ENST00000587290 FDX1P10109 184 aa17.95■□□□□ 0.46
PRKCSH-204ENST00000587290 HSPD1P10809 573 aaKnown RBP17.95■□□□□ 0.46
PRKCSH-204ENST00000587290 TNFAIP2Q03169 654 aa17.95■□□□□ 0.46
PRKCSH-204ENST00000587290 MCMDC2Q4G0Z9 681 aa17.95■□□□□ 0.46
PRKCSH-204ENST00000587290 CXCL17Q6UXB2 119 aa17.95■□□□□ 0.46
PRKCSH-204ENST00000587290 MYLIPQ8WY64 445 aa17.95■□□□□ 0.46
PRKCSH-204ENST00000587290 RILPL2Q969X0 211 aa17.95■□□□□ 0.46
PRKCSH-204ENST00000587290 TMEM47Q9BQJ4 181 aa17.95■□□□□ 0.46
PRKCSH-204ENST00000587290 PPP1R12CQ9BZL4 782 aa17.95■□□□□ 0.46
PRKCSH-204ENST00000587290 SEMA6BQ9H3T3 888 aa17.95■□□□□ 0.46
PRKCSH-204ENST00000587290 CYP39A1Q9NYL5 469 aa17.95■□□□□ 0.46
PRKCSH-204ENST00000587290 MYO9BQ13459 2157 aa17.95■□□□□ 0.46
PRKCSH-204ENST00000587290 NFIBO00712 420 aa17.94■□□□□ 0.46
PRKCSH-204ENST00000587290 PLA2G6O60733 806 aa17.94■□□□□ 0.46
PRKCSH-204ENST00000587290 FGRP09769 529 aa17.94■□□□□ 0.46
PRKCSH-204ENST00000587290 NOVP48745 357 aa17.94■□□□□ 0.46
PRKCSH-204ENST00000587290 CDK7P50613 346 aa17.94■□□□□ 0.46
PRKCSH-204ENST00000587290 ALX1Q15699 326 aa17.94■□□□□ 0.46
PRKCSH-204ENST00000587290 TLK2Q86UE8 772 aa17.94■□□□□ 0.46
PRKCSH-204ENST00000587290 TBC1D10CQ8IV04 446 aa17.94■□□□□ 0.46
PRKCSH-204ENST00000587290 PCSK9Q8NBP7 692 aaKnown RBP17.94■□□□□ 0.46
PRKCSH-204ENST00000587290 TOX2Q96NM4 488 aa17.94■□□□□ 0.46
PRKCSH-204ENST00000587290 RANBP17Q9H2T7 1088 aaKnown RBP17.94■□□□□ 0.46
PRKCSH-204ENST00000587290 SPC25Q9HBM1 224 aa17.94■□□□□ 0.46
PRKCSH-204ENST00000587290 ELP1O95163 1332 aa17.94■□□□□ 0.46
PRKCSH-204ENST00000587290 A0A0U1RQG5 324 aaPredicted RBP17.93■□□□□ 0.46
PRKCSH-204ENST00000587290 ARVCFO00192 962 aa17.93■□□□□ 0.46
PRKCSH-204ENST00000587290 TIMP1P01033 207 aa17.93■□□□□ 0.46
PRKCSH-204ENST00000587290 SMPD1P17405 629 aa17.93■□□□□ 0.46
PRKCSH-204ENST00000587290 SMAD3P84022 425 aaKnown RBP17.93■□□□□ 0.46
PRKCSH-204ENST00000587290 TKFCQ3LXA3 575 aa17.93■□□□□ 0.46
PRKCSH-204ENST00000587290 PPP4R3BQ5MIZ7 849 aa17.93■□□□□ 0.46
PRKCSH-204ENST00000587290 SYDE2Q5VT97 1194 aa17.93■□□□□ 0.46
PRKCSH-204ENST00000587290 FAM126BQ8IXS8 530 aa17.93■□□□□ 0.46
PRKCSH-204ENST00000587290 DCAF4Q8WV16 495 aa17.93■□□□□ 0.46
PRKCSH-204ENST00000587290 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.93■□□□□ 0.461e-6■■■□□ 19
PRKCSH-204ENST00000587290 GNEQ9Y223 722 aaKnown RBP17.93■□□□□ 0.46
PRKCSH-204ENST00000587290 MYH6P13533 1939 aa17.93■□□□□ 0.46
PRKCSH-204ENST00000587290 CCDC171Q6TFL3 1326 aa17.93■□□□□ 0.46
PRKCSH-204ENST00000587290 ASB14A6NK59 587 aa17.92■□□□□ 0.46
PRKCSH-204ENST00000587290 ICAM1P05362 532 aa17.92■□□□□ 0.46
PRKCSH-204ENST00000587290 ACRP10323 421 aa17.92■□□□□ 0.46
PRKCSH-204ENST00000587290 TOP1P11387 765 aaKnown RBP17.92■□□□□ 0.46
PRKCSH-204ENST00000587290 TAPT1Q6NXT6 567 aa17.92■□□□□ 0.46
PRKCSH-204ENST00000587290 SLC30A10Q6XR72 485 aa17.92■□□□□ 0.46
PRKCSH-204ENST00000587290 ZKSCAN3Q9BRR0 538 aa17.92■□□□□ 0.46
PRKCSH-204ENST00000587290 NEDD4P46934 1319 aa17.92■□□□□ 0.46
PRKCSH-204ENST00000587290 DYNC1LI2O43237 492 aaPredicted RBP17.91■□□□□ 0.46
PRKCSH-204ENST00000587290 IGHDP01880 384 aa17.91■□□□□ 0.46
PRKCSH-204ENST00000587290 PDHBP11177 359 aa17.91■□□□□ 0.46
PRKCSH-204ENST00000587290 CSF2RAP15509 400 aa17.91■□□□□ 0.46
PRKCSH-204ENST00000587290 PSMC6P62333 389 aa17.91■□□□□ 0.46
PRKCSH-204ENST00000587290 BAATQ14032 418 aaPredicted RBP17.91■□□□□ 0.46
PRKCSH-204ENST00000587290 FSCN1Q16658 493 aaKnown RBP17.91■□□□□ 0.46
PRKCSH-204ENST00000587290 C16orf59Q7L2K0 433 aa17.91■□□□□ 0.46
PRKCSH-204ENST00000587290 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.91■□□□□ 0.46
PRKCSH-204ENST00000587290 CPVLQ9H3G5 476 aa17.91■□□□□ 0.46
PRKCSH-204ENST00000587290 GRIN2DO15399 1336 aa17.91■□□□□ 0.46
PRKCSH-204ENST00000587290 UMODL1Q5DID0 1318 aa17.91■□□□□ 0.46
PRKCSH-204ENST00000587290 MROH7Q68CQ1 1323 aa17.91■□□□□ 0.46
PRKCSH-204ENST00000587290 GRXCR1A8MXD5 290 aa17.9■□□□□ 0.46
PRKCSH-204ENST00000587290 CYP2C18P33260 490 aa17.9■□□□□ 0.46
PRKCSH-204ENST00000587290 MFSD5Q6N075 450 aa17.9■□□□□ 0.46
PRKCSH-204ENST00000587290 BTNL9Q6UXG8 535 aa17.9■□□□□ 0.46
PRKCSH-204ENST00000587290 MAFAQ8NHW3 353 aaPredicted RBP17.9■□□□□ 0.46
PRKCSH-204ENST00000587290 ZMYM6O95789 1325 aa17.9■□□□□ 0.46
PRKCSH-204ENST00000587290 SCN5AQ14524 2016 aa17.89■□□□□ 0.46
PRKCSH-204ENST00000587290 PTPDC1A2A3K4 754 aa17.89■□□□□ 0.45
PRKCSH-204ENST00000587290 GOLGA8HP0CJ92 632 aa17.89■□□□□ 0.45
PRKCSH-204ENST00000587290 SDSP20132 328 aa17.89■□□□□ 0.45
PRKCSH-204ENST00000587290 DNAJB2P25686 324 aa17.89■□□□□ 0.45
PRKCSH-204ENST00000587290 CALML3P27482 149 aa17.89■□□□□ 0.45
PRKCSH-204ENST00000587290 ALDH5A1P51649 535 aaPredicted RBP17.89■□□□□ 0.45
PRKCSH-204ENST00000587290 NKX3-2P78367 333 aa17.89■□□□□ 0.45
PRKCSH-204ENST00000587290 TMEM240Q5SV17 173 aa17.89■□□□□ 0.45
PRKCSH-204ENST00000587290 AKNAD1Q5T1N1 836 aa17.89■□□□□ 0.45
PRKCSH-204ENST00000587290 KIAA1211Q6ZU35 1233 aa17.89■□□□□ 0.45
PRKCSH-204ENST00000587290 PLEKHM2Q8IWE5 1019 aa17.89■□□□□ 0.45
PRKCSH-204ENST00000587290 SMC5Q8IY18 1101 aa17.89■□□□□ 0.45
PRKCSH-204ENST00000587290 PPP1R13LQ8WUF5 828 aa17.89■□□□□ 0.45
PRKCSH-204ENST00000587290 CLEC4DQ8WXI8 215 aa17.89■□□□□ 0.45
PRKCSH-204ENST00000587290 AP5M1Q9H0R1 490 aa17.89■□□□□ 0.45
PRKCSH-204ENST00000587290 CD4P01730 458 aa17.88■□□□□ 0.45
PRKCSH-204ENST00000587290 PBX2P40425 430 aa17.88■□□□□ 0.45
PRKCSH-204ENST00000587290 ZNF543Q08ER8 600 aa17.88■□□□□ 0.45
PRKCSH-204ENST00000587290 MFSD6Q6ZSS7 791 aa17.88■□□□□ 0.45
PRKCSH-204ENST00000587290 EXOC6Q8TAG9 804 aa17.88■□□□□ 0.45
PRKCSH-204ENST00000587290 COL25A1Q9BXS0 654 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms