RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 RAVER2Q9HCJ3 691 aaKnown RBP9.22□□□□□ -0.93
VMP1-204ENST00000587259 STARD7Q9NQZ5 370 aa9.22□□□□□ -0.93
VMP1-204ENST00000587259 MYH8P13535 1937 aa9.22□□□□□ -0.93
VMP1-204ENST00000587259 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.21□□□□□ -0.94
VMP1-204ENST00000587259 K7ELQ4 463 aaPredicted RBP9.21□□□□□ -0.94
VMP1-204ENST00000587259 NDUFB10O96000 172 aa9.21□□□□□ -0.94
VMP1-204ENST00000587259 ZFYP08048 801 aaPredicted RBP9.21□□□□□ -0.94
VMP1-204ENST00000587259 C6orf222P0C671 652 aaPredicted RBP9.21□□□□□ -0.94
VMP1-204ENST00000587259 RASA1P20936 1047 aa9.21□□□□□ -0.94
VMP1-204ENST00000587259 SNAP25P60880 206 aa9.21□□□□□ -0.94
VMP1-204ENST00000587259 BEX3Q00994 111 aa9.21□□□□□ -0.94
VMP1-204ENST00000587259 TMEM63BQ5T3F8 832 aa9.21□□□□□ -0.94
VMP1-204ENST00000587259 RASGRP2Q7LDG7 609 aa9.21□□□□□ -0.94
VMP1-204ENST00000587259 KLHDC9Q8NEP7 349 aa9.21□□□□□ -0.94
VMP1-204ENST00000587259 KIFC2Q96AC6 838 aa9.21□□□□□ -0.94
VMP1-204ENST00000587259 VTI1AQ96AJ9 217 aa9.21□□□□□ -0.94
VMP1-204ENST00000587259 TIFAQ96CG3 184 aa9.21□□□□□ -0.94
VMP1-204ENST00000587259 SLF1Q9BQI6 1058 aa9.21□□□□□ -0.94
VMP1-204ENST00000587259 ZNF576Q9H609 170 aa9.21□□□□□ -0.94
VMP1-204ENST00000587259 SH2D4AQ9H788 454 aa9.21□□□□□ -0.94
VMP1-204ENST00000587259 KANSL2Q9H9L4 492 aa9.21□□□□□ -0.94
VMP1-204ENST00000587259 GOPCQ9HD26 462 aa9.21□□□□□ -0.94
VMP1-204ENST00000587259 HOMER2Q9NSB8 354 aa9.21□□□□□ -0.94
VMP1-204ENST00000587259 ATP8A2Q9NTI2 1148 aa9.21□□□□□ -0.94
VMP1-204ENST00000587259 CNPY2Q9Y2B0 182 aa9.21□□□□□ -0.94
VMP1-204ENST00000587259 UMODL1Q5DID0 1318 aa9.21□□□□□ -0.94
VMP1-204ENST00000587259 CHD9Q3L8U1 2897 aa9.2□□□□□ -0.94
VMP1-204ENST00000587259 DCDC2CA8MYV0 355 aa9.2□□□□□ -0.94
VMP1-204ENST00000587259 MINDY4BA8MYZ0 360 aa9.2□□□□□ -0.94
VMP1-204ENST00000587259 TIMP1P01033 207 aa9.2□□□□□ -0.94
VMP1-204ENST00000587259 ASGR1P07306 291 aa9.2□□□□□ -0.94
VMP1-204ENST00000587259 HSP90AA1P07900 732 aaKnown RBP9.2□□□□□ -0.94
VMP1-204ENST00000587259 CYP2C18P33260 490 aa9.2□□□□□ -0.94
VMP1-204ENST00000587259 HSPA4P34932 840 aa9.2□□□□□ -0.94
VMP1-204ENST00000587259 CNTN2Q02246 1040 aa9.2□□□□□ -0.94
VMP1-204ENST00000587259 ADGRE1Q14246 886 aa9.2□□□□□ -0.94
VMP1-204ENST00000587259 CCDC144BQ3MJ40 725 aa9.2□□□□□ -0.94
VMP1-204ENST00000587259 TMEM240Q5SV17 173 aa9.2□□□□□ -0.94
VMP1-204ENST00000587259 ZSCAN25Q6NSZ9 544 aa9.2□□□□□ -0.94
VMP1-204ENST00000587259 CWC27Q6UX04 472 aaKnown RBP9.2□□□□□ -0.94
VMP1-204ENST00000587259 CCDC129Q6ZRS4 1044 aa9.2□□□□□ -0.94
VMP1-204ENST00000587259 ZNF365Q70YC5 407 aa9.2□□□□□ -0.94
VMP1-204ENST00000587259 ANKRD33Q7Z3H0 272 aa9.2□□□□□ -0.94
VMP1-204ENST00000587259 LRRC47Q8N1G4 583 aaKnown RBP9.2□□□□□ -0.94
VMP1-204ENST00000587259 KBTBD3Q8NAB2 608 aa9.2□□□□□ -0.94
VMP1-204ENST00000587259 PPP1R13LQ8WUF5 828 aa9.2□□□□□ -0.94
VMP1-204ENST00000587259 DDX11Q96FC9 970 aa9.2□□□□□ -0.94
VMP1-204ENST00000587259 CCDC17Q96LX7 622 aa9.2□□□□□ -0.94
VMP1-204ENST00000587259 PBX4Q9BYU1 374 aa9.2□□□□□ -0.94
VMP1-204ENST00000587259 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.2□□□□□ -0.94
VMP1-204ENST00000587259 CXXC1Q9P0U4 656 aaPredicted RBP9.2□□□□□ -0.94
VMP1-204ENST00000587259 CLIP2Q9UDT6 1046 aa9.2□□□□□ -0.94
VMP1-204ENST00000587259 TBX21Q9UL17 535 aa9.2□□□□□ -0.94
VMP1-204ENST00000587259 FAM184BQ9ULE4 1060 aa9.2□□□□□ -0.94
VMP1-204ENST00000587259 MUC3AQ02505 3323 aa9.2□□□□□ -0.94
VMP1-204ENST00000587259 MCM3APO60318 1980 aa9.19□□□□□ -0.94
VMP1-204ENST00000587259 DNAJC25-GNG10A0A024R161 153 aa9.19□□□□□ -0.94
VMP1-204ENST00000587259 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.19□□□□□ -0.94
VMP1-204ENST00000587259 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.19□□□□□ -0.94
VMP1-204ENST00000587259 GSG1L2A8MUP6 293 aa9.19□□□□□ -0.94
VMP1-204ENST00000587259 F5H6K3 240 aa9.19□□□□□ -0.94
VMP1-204ENST00000587259 CTAGE5O15320 804 aa9.19□□□□□ -0.94
VMP1-204ENST00000587259 EMP3P54852 163 aa9.19□□□□□ -0.94
VMP1-204ENST00000587259 KLRC3Q07444 240 aa9.19□□□□□ -0.94
VMP1-204ENST00000587259 ACVR2BQ13705 512 aa9.19□□□□□ -0.94
VMP1-204ENST00000587259 TMEM92Q6UXU6 159 aa9.19□□□□□ -0.94
VMP1-204ENST00000587259 OSBP2Q969R2 916 aa9.19□□□□□ -0.94
VMP1-204ENST00000587259 PURBQ96QR8 312 aaKnown RBP9.19□□□□□ -0.94
VMP1-204ENST00000587259 KIF2CQ99661 725 aa9.19□□□□□ -0.94
VMP1-204ENST00000587259 ANP32EQ9BTT0 268 aa9.19□□□□□ -0.94
VMP1-204ENST00000587259 TEX13BQ9BXU2 312 aa9.19□□□□□ -0.94
VMP1-204ENST00000587259 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.19□□□□□ -0.94
VMP1-204ENST00000587259 NKX2-4Q9H2Z4 354 aa9.19□□□□□ -0.94
VMP1-204ENST00000587259 EPB41L4AQ9HCS5 686 aaPredicted RBP9.19□□□□□ -0.94
VMP1-204ENST00000587259 NRBP1Q9UHY1 535 aa9.19□□□□□ -0.94
VMP1-204ENST00000587259 ISY1Q9ULR0 285 aaKnown RBP9.19□□□□□ -0.94
VMP1-204ENST00000587259 DIS3Q9Y2L1 958 aaKnown RBP9.19□□□□□ -0.94
VMP1-204ENST00000587259 YBX2Q9Y2T7 364 aaKnown RBP9.19□□□□□ -0.94
VMP1-204ENST00000587259 ASTN1O14525 1302 aa9.19□□□□□ -0.94
VMP1-204ENST00000587259 CCDC171Q6TFL3 1326 aa9.19□□□□□ -0.94
VMP1-204ENST00000587259 ROBO3Q96MS0 1386 aa9.19□□□□□ -0.94
VMP1-204ENST00000587259 M0R2C6 588 aa9.18□□□□□ -0.94
VMP1-204ENST00000587259 HOXB3P14651 431 aaPredicted RBP9.18□□□□□ -0.94
VMP1-204ENST00000587259 MYOGP15173 224 aa9.18□□□□□ -0.94
VMP1-204ENST00000587259 COL9A1P20849 921 aa9.18□□□□□ -0.94
VMP1-204ENST00000587259 IGFBP4P22692 258 aa9.18□□□□□ -0.94
VMP1-204ENST00000587259 CDK7P50613 346 aa9.18□□□□□ -0.94
VMP1-204ENST00000587259 RABGGTBP53611 331 aa9.18□□□□□ -0.94
VMP1-204ENST00000587259 CCL23P55773 120 aa9.18□□□□□ -0.94
VMP1-204ENST00000587259 PSMC6P62333 389 aa9.18□□□□□ -0.94
VMP1-204ENST00000587259 KRT32Q14532 448 aa9.18□□□□□ -0.94
VMP1-204ENST00000587259 UBE3CQ15386 1083 aa9.18□□□□□ -0.94
VMP1-204ENST00000587259 TJAP1Q5JTD0 557 aa9.18□□□□□ -0.94
VMP1-204ENST00000587259 GNASQ5JWF2 1037 aa9.18□□□□□ -0.94
VMP1-204ENST00000587259 MFSD5Q6N075 450 aa9.18□□□□□ -0.94
VMP1-204ENST00000587259 TMED8Q6PL24 325 aaPredicted RBP9.18□□□□□ -0.94
VMP1-204ENST00000587259 CXCL17Q6UXB2 119 aa9.18□□□□□ -0.94
VMP1-204ENST00000587259 ARMCX2Q7L311 632 aa9.18□□□□□ -0.94
VMP1-204ENST00000587259 EEPD1Q7L9B9 569 aa9.18□□□□□ -0.94
VMP1-204ENST00000587259 FAM126BQ8IXS8 530 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms