RNA–Protein interactions for RNA: ENST00000587228.5

GPATCH8-205, Transcript of G-patch domain containing 8, humanhuman

TSL 1 (best)

Gene GPATCH8, Length 4,713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-205ENST00000587228 NBPF3Q9H094 633 aa10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 PCDHA5Q9Y5H7 936 aa10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 MEIS1O00470 390 aa10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 HNRNPDLO14979 420 aaKnown RBP10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 GTPBP6O43824 516 aaPredicted RBP10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 ABL1P00519 1130 aa10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 FERP16591 822 aa10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 ERCC5P28715 1186 aaPredicted RBP10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 LONP1P36776 959 aaKnown RBP10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 ADAM9Q13443 819 aa10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 CDC37Q16543 378 aaPredicted RBP10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 ATRIPQ8WXE1 791 aa10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 SLC7A3Q8WY07 619 aa10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 MRRFQ96E11 262 aaKnown RBP10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 TRERF1Q96PN7 1200 aa10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 FOXP1Q9H334 677 aaPredicted RBP10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 TTLL3Q9Y4R7 772 aa10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 CEP104O60308 925 aa10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 RPN1P04843 607 aaKnown RBP10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 STAT1P42224 750 aa10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 MORC3Q14149 939 aa10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 PPP2R5DQ14738 602 aa10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 R3HDM1Q15032 1099 aaKnown RBP10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 SLC39A14Q15043 492 aa10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 FAM160B1Q5W0V3 765 aa10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 SPECC1LQ69YQ0 1117 aa10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 PPP1R21Q6ZMI0 780 aa10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 ZNF365Q70YC5 407 aa10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 PPM1KQ8N3J5 372 aa10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 POMGNT1Q8WZA1 660 aa10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 ATP6V0A1Q93050 837 aa10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 SECISBP2LQ93073 1101 aaKnown RBP10.74□□□□□ -0.69
GPATCH8-205ENST00000587228 DYNC1I1O14576 645 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 TMEM191BP0C7N4 346 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 SNX16P57768 344 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 IFRD2Q12894 506 aaPredicted RBP10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 NKX1-1Q15270 411 aaPredicted RBP10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 UAP1Q16222 522 aaPredicted RBP10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 WRNIP1Q96S55 665 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 AP5M1Q9H0R1 490 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 TULP4Q9NRJ4 1543 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 FANCLQ9NW38 375 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 ZHX2Q9Y6X8 837 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 A0A0G2JLW4 131 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 LARGE1O95461 756 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 ZNF445P59923 1031 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 GPSM2P81274 684 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 VPS72Q15906 364 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 SREK1Q8WXA9 508 aaKnown RBP10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 NAPGQ99747 312 aaPredicted RBP10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 SELENOSQ9BQE4 189 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 NDC80O14777 642 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 PLEKHA8P1O95397 391 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 NECTIN1Q15223 517 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 TMEM179Q6ZVK1 233 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 U2AF1L4Q8WU68 220 aaKnown RBP10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 LARP4BQ92615 738 aaKnown RBP10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 AKT3Q9Y243 479 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 ADGRB3O60242 1522 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 USP31Q70CQ4 1352 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 P4HA1P13674 534 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 CLCN1P35523 988 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 LIFRP42702 1097 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 KIF23Q02241 960 aaPredicted RBP10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 SEPT2Q15019 361 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 LRRC41Q15345 812 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 PTPROQ16827 1216 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 UBL4BQ8N7F7 174 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 BRIP1Q9BX63 1249 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 GJB4Q9NTQ9 266 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 SERPINA10Q9UK55 444 aa10.73□□□□□ -0.69
GPATCH8-205ENST00000587228 CPDO75976 1380 aa10.72□□□□□ -0.69
GPATCH8-205ENST00000587228 CDHR2Q9BYE9 1310 aa10.72□□□□□ -0.69
GPATCH8-205ENST00000587228 ARHGAP6O43182 974 aa10.72□□□□□ -0.69
GPATCH8-205ENST00000587228 LPXNO60711 386 aa10.72□□□□□ -0.69
GPATCH8-205ENST00000587228 ATP2A2P16615 1042 aaKnown RBP10.72□□□□□ -0.69
GPATCH8-205ENST00000587228 EVCP57679 992 aa10.72□□□□□ -0.69
GPATCH8-205ENST00000587228 CCDC26Q8TAB7 109 aa10.72□□□□□ -0.69
GPATCH8-205ENST00000587228 CEP170P1Q96L14 293 aa10.72□□□□□ -0.69
GPATCH8-205ENST00000587228 GNA14O95837 355 aa10.72□□□□□ -0.69
GPATCH8-205ENST00000587228 TNNC2P02585 160 aa10.72□□□□□ -0.69
GPATCH8-205ENST00000587228 PPP2R3AQ06190 1150 aa10.72□□□□□ -0.69
GPATCH8-205ENST00000587228 FAM193BQ96PV7 902 aaPredicted RBP10.72□□□□□ -0.69
GPATCH8-205ENST00000587228 UBN2Q6ZU65 1347 aa10.72□□□□□ -0.69
GPATCH8-205ENST00000587228 A0A087WWV3 80 aa10.72□□□□□ -0.69
GPATCH8-205ENST00000587228 PALM3A6NDB9 673 aaPredicted RBP10.72□□□□□ -0.69
GPATCH8-205ENST00000587228 SMYD4Q8IYR2 804 aaPredicted RBP10.72□□□□□ -0.69
GPATCH8-205ENST00000587228 UBLCP1Q8WVY7 318 aaPredicted RBP10.72□□□□□ -0.69
GPATCH8-205ENST00000587228 IFIH1Q9BYX4 1025 aaKnown RBP10.72□□□□□ -0.69
GPATCH8-205ENST00000587228 C1orf112Q9NSG2 853 aa10.72□□□□□ -0.69
GPATCH8-205ENST00000587228 NMT2O60551 498 aa10.72□□□□□ -0.69
GPATCH8-205ENST00000587228 MMP1P03956 469 aa10.72□□□□□ -0.69
GPATCH8-205ENST00000587228 TRAPPC10P48553 1259 aa10.72□□□□□ -0.69
GPATCH8-205ENST00000587228 SPP2Q13103 211 aa10.72□□□□□ -0.69
GPATCH8-205ENST00000587228 HS1BP3Q53T59 392 aa10.72□□□□□ -0.69
GPATCH8-205ENST00000587228 MICALCLQ6ZW33 695 aa10.72□□□□□ -0.69
GPATCH8-205ENST00000587228 DGKHQ86XP1 1220 aa10.72□□□□□ -0.69
GPATCH8-205ENST00000587228 GRAMD1CQ8IYS0 662 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms