RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 CEP95Q96GE4 821 aa21.16■□□□□ 0.98
RETREG3-205ENST00000586870 CFHR5Q9BXR6 569 aa21.16■□□□□ 0.98
RETREG3-205ENST00000586870 BRMS1Q9HCU9 246 aa21.16■□□□□ 0.98
RETREG3-205ENST00000586870 GOPCQ9HD26 462 aa21.16■□□□□ 0.98
RETREG3-205ENST00000586870 MTMR4Q9NYA4 1195 aa21.16■□□□□ 0.98
RETREG3-205ENST00000586870 STX8Q9UNK0 236 aa21.16■□□□□ 0.98
RETREG3-205ENST00000586870 FAM237AA0A1B0GTK4 181 aa21.15■□□□□ 0.98
RETREG3-205ENST00000586870 GPR25O00155 361 aa21.15■□□□□ 0.98
RETREG3-205ENST00000586870 CYP2C8P10632 490 aa21.15■□□□□ 0.98
RETREG3-205ENST00000586870 MARCKSP29966 332 aaPredicted RBP21.15■□□□□ 0.98
RETREG3-205ENST00000586870 SIAH1Q8IUQ4 282 aa21.15■□□□□ 0.98
RETREG3-205ENST00000586870 VPS54Q9P1Q0 977 aa21.15■□□□□ 0.98
RETREG3-205ENST00000586870 CEP131Q9UPN4 1083 aa21.15■□□□□ 0.98
RETREG3-205ENST00000586870 MORC2Q9Y6X9 1032 aaPredicted RBP21.15■□□□□ 0.98
RETREG3-205ENST00000586870 TLR2O60603 784 aa21.15■□□□□ 0.98
RETREG3-205ENST00000586870 TOB1P50616 345 aaPredicted RBP21.15■□□□□ 0.98
RETREG3-205ENST00000586870 ANO6Q4KMQ2 910 aa21.15■□□□□ 0.98
RETREG3-205ENST00000586870 C12orf42Q96LP6 360 aa21.15■□□□□ 0.98
RETREG3-205ENST00000586870 TIGD1Q96MW7 591 aa21.15■□□□□ 0.98
RETREG3-205ENST00000586870 R3HDMLQ9H3Y0 253 aa21.15■□□□□ 0.98
RETREG3-205ENST00000586870 USP17L15C9J2P7 530 aa21.14■□□□□ 0.97
RETREG3-205ENST00000586870 USP17L13C9JLJ4 530 aa21.14■□□□□ 0.97
RETREG3-205ENST00000586870 USP17L11C9JVI0 530 aa21.14■□□□□ 0.97
RETREG3-205ENST00000586870 USP17L18D6R9N7 530 aa21.14■□□□□ 0.97
RETREG3-205ENST00000586870 USP17L22D6RA61 530 aa21.14■□□□□ 0.97
RETREG3-205ENST00000586870 USP17L17D6RBQ6 530 aa21.14■□□□□ 0.97
RETREG3-205ENST00000586870 USP17L19D6RCP7 530 aa21.14■□□□□ 0.97
RETREG3-205ENST00000586870 USP17L20D6RJB6 530 aa21.14■□□□□ 0.97
RETREG3-205ENST00000586870 SCG2P13521 617 aa21.14■□□□□ 0.97
RETREG3-205ENST00000586870 USP17L24Q0WX57 530 aa21.14■□□□□ 0.97
RETREG3-205ENST00000586870 NR5A1Q13285 461 aa21.14■□□□□ 0.97
RETREG3-205ENST00000586870 PFKFB3Q16875 520 aaPredicted RBP21.14■□□□□ 0.97
RETREG3-205ENST00000586870 SPICE1Q8N0Z3 855 aa21.14■□□□□ 0.97
RETREG3-205ENST00000586870 LPAR1Q92633 364 aa21.14■□□□□ 0.97
RETREG3-205ENST00000586870 SHISA4Q96DD7 197 aa21.14■□□□□ 0.97
RETREG3-205ENST00000586870 TMEM47Q9BQJ4 181 aa21.14■□□□□ 0.97
RETREG3-205ENST00000586870 LZTS2Q9BRK4 669 aa21.14■□□□□ 0.97
RETREG3-205ENST00000586870 VCPKMTQ9H867 229 aa21.14■□□□□ 0.97
RETREG3-205ENST00000586870 IGKV6D-41A0A0C4DH26 115 aa21.13■□□□□ 0.97
RETREG3-205ENST00000586870 ESPNB1AK53 854 aa21.13■□□□□ 0.97
RETREG3-205ENST00000586870 FKTNO75072 461 aa21.13■□□□□ 0.97
RETREG3-205ENST00000586870 PFKFB1P16118 471 aa21.13■□□□□ 0.97
RETREG3-205ENST00000586870 VCAM1P19320 739 aa21.13■□□□□ 0.97
RETREG3-205ENST00000586870 HOXA7P31268 230 aaPredicted RBP21.13■□□□□ 0.97
RETREG3-205ENST00000586870 OXER1Q8TDS5 423 aa21.13■□□□□ 0.97
RETREG3-205ENST00000586870 SDF4Q9BRK5 362 aa21.13■□□□□ 0.97
RETREG3-205ENST00000586870 TANGO6Q9C0B7 1094 aa21.13■□□□□ 0.97
RETREG3-205ENST00000586870 RPAP3Q9H6T3 665 aaPredicted RBP21.13■□□□□ 0.97
RETREG3-205ENST00000586870 PRDM10Q9NQV6 1147 aa21.13■□□□□ 0.97
RETREG3-205ENST00000586870 USP25Q9UHP3 1055 aa21.13■□□□□ 0.97
RETREG3-205ENST00000586870 CPA4Q9UI42 421 aa21.13■□□□□ 0.97
RETREG3-205ENST00000586870 HPSEQ9Y251 543 aa21.13■□□□□ 0.97
RETREG3-205ENST00000586870 ZNF202O95125 648 aa21.12■□□□□ 0.97
RETREG3-205ENST00000586870 NOVP48745 357 aa21.12■□□□□ 0.97
RETREG3-205ENST00000586870 STX1AQ16623 288 aa21.12■□□□□ 0.97
RETREG3-205ENST00000586870 RESP18Q5W5W9 173 aa21.12■□□□□ 0.97
RETREG3-205ENST00000586870 KRI1Q8N9T8 703 aaKnown RBP21.12■□□□□ 0.97
RETREG3-205ENST00000586870 ZNF296Q8WUU4 475 aaPredicted RBP21.12■□□□□ 0.97
RETREG3-205ENST00000586870 ASCC2Q9H1I8 757 aaPredicted RBP21.12■□□□□ 0.97
RETREG3-205ENST00000586870 CBX8Q9HC52 389 aa21.12■□□□□ 0.97
RETREG3-205ENST00000586870 SH3GLB2Q9NR46 395 aa21.12■□□□□ 0.97
RETREG3-205ENST00000586870 CCDC39Q9UFE4 941 aa21.12■□□□□ 0.97
RETREG3-205ENST00000586870 ATAD5Q96QE3 1844 aa21.12■□□□□ 0.97
RETREG3-205ENST00000586870 hCG_1642624A0A1W2PR95 340 aa21.11■□□□□ 0.97
RETREG3-205ENST00000586870 ANO10Q9NW15 660 aa21.11■□□□□ 0.97
RETREG3-205ENST00000586870 MAD2L2Q9UI95 211 aa21.11■□□□□ 0.97
RETREG3-205ENST00000586870 NOL7Q9UMY1 257 aaKnown RBP21.11■□□□□ 0.97
RETREG3-205ENST00000586870 PLIN4Q96Q06 1357 aa21.11■□□□□ 0.97
RETREG3-205ENST00000586870 PALM3A6NDB9 673 aaPredicted RBP21.11■□□□□ 0.97
RETREG3-205ENST00000586870 F5H6K3 240 aa21.11■□□□□ 0.97
RETREG3-205ENST00000586870 SP3Q02447 781 aa21.11■□□□□ 0.97
RETREG3-205ENST00000586870 KLRC3Q07444 240 aa21.11■□□□□ 0.97
RETREG3-205ENST00000586870 NOM1Q5C9Z4 860 aaKnown RBP21.11■□□□□ 0.97
RETREG3-205ENST00000586870 SHC4Q6S5L8 630 aa21.11■□□□□ 0.97
RETREG3-205ENST00000586870 FAM177A1Q8N128 213 aaPredicted RBP21.11■□□□□ 0.97
RETREG3-205ENST00000586870 LRRC47Q8N1G4 583 aaKnown RBP21.11■□□□□ 0.97
RETREG3-205ENST00000586870 MKL1Q969V6 931 aa21.11■□□□□ 0.97
RETREG3-205ENST00000586870 RRAGDQ9NQL2 400 aaPredicted RBP21.11■□□□□ 0.97
RETREG3-205ENST00000586870 ADCY5O95622 1261 aa21.1■□□□□ 0.97
RETREG3-205ENST00000586870 BMP15O95972 392 aa21.1■□□□□ 0.97
RETREG3-205ENST00000586870 TOP1P11387 765 aaKnown RBP21.1■□□□□ 0.97
RETREG3-205ENST00000586870 PTPREP23469 700 aa21.1■□□□□ 0.97
RETREG3-205ENST00000586870 CALML3P27482 149 aa21.1■□□□□ 0.97
RETREG3-205ENST00000586870 SYKP43405 635 aa21.1■□□□□ 0.97
RETREG3-205ENST00000586870 ZNF165P49910 485 aa21.1■□□□□ 0.97
RETREG3-205ENST00000586870 KIF22Q14807 665 aa21.1■□□□□ 0.97
RETREG3-205ENST00000586870 SAMD1Q6SPF0 538 aaPredicted RBP21.1■□□□□ 0.97
RETREG3-205ENST00000586870 CATSPERGQ6ZRH7 1159 aa21.1■□□□□ 0.97
RETREG3-205ENST00000586870 ZNF579Q8NAF0 562 aaKnown RBP21.1■□□□□ 0.97
RETREG3-205ENST00000586870 TNFRSF25Q93038 417 aa21.1■□□□□ 0.97
RETREG3-205ENST00000586870 P2RX7Q99572 595 aaKnown RBP21.1■□□□□ 0.97
RETREG3-205ENST00000586870 WDR46O15213 610 aaKnown RBP21.09■□□□□ 0.97
RETREG3-205ENST00000586870 GCLCP48506 637 aaPredicted RBP21.09■□□□□ 0.97
RETREG3-205ENST00000586870 NLRP5P59047 1200 aa21.09■□□□□ 0.97
RETREG3-205ENST00000586870 COL13A1Q5TAT6 717 aaPredicted RBP21.09■□□□□ 0.97
RETREG3-205ENST00000586870 ZSCAN30Q86W11 494 aa21.09■□□□□ 0.97
RETREG3-205ENST00000586870 DNAJC25Q9H1X3 360 aa21.09■□□□□ 0.97
RETREG3-205ENST00000586870 FBXO2Q9UK22 296 aaPredicted RBP21.09■□□□□ 0.97
RETREG3-205ENST00000586870 SYNPO2Q9UMS6 1093 aa21.09■□□□□ 0.97
RETREG3-205ENST00000586870 PCDHB6Q9Y5E3 794 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms