RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 RRP12Q5JTH9 1297 aaKnown RBP16.55■□□□□ 0.24
ATG4D-206ENST00000586863 TTBK2Q6IQ55 1244 aa16.55■□□□□ 0.24
ATG4D-206ENST00000586863 PCSK9Q8NBP7 692 aaKnown RBP16.55■□□□□ 0.24
ATG4D-206ENST00000586863 DCAF4Q8WV16 495 aa16.55■□□□□ 0.24
ATG4D-206ENST00000586863 RNPC3Q96LT9 517 aaKnown RBP16.55■□□□□ 0.24
ATG4D-206ENST00000586863 LNPKQ9C0E8 428 aa16.55■□□□□ 0.24
ATG4D-206ENST00000586863 TOMM22Q9NS69 142 aa16.55■□□□□ 0.24
ATG4D-206ENST00000586863 CCPG1Q9ULG6 757 aa16.55■□□□□ 0.24
ATG4D-206ENST00000586863 SPTBN5Q9NRC6 3674 aaKnown RBP16.55■□□□□ 0.24
ATG4D-206ENST00000586863 HSPD1P10809 573 aaKnown RBP16.54■□□□□ 0.24
ATG4D-206ENST00000586863 SLC16A2P36021 539 aa16.54■□□□□ 0.24
ATG4D-206ENST00000586863 CDK7P50613 346 aa16.54■□□□□ 0.24
ATG4D-206ENST00000586863 HAND2P61296 217 aa16.54■□□□□ 0.24
ATG4D-206ENST00000586863 BEX3Q00994 111 aa16.54■□□□□ 0.24
ATG4D-206ENST00000586863 GNASQ5JWF2 1037 aa16.54■□□□□ 0.24
ATG4D-206ENST00000586863 PURBQ96QR8 312 aaKnown RBP16.54■□□□□ 0.24
ATG4D-206ENST00000586863 RANBP17Q9H2T7 1088 aaKnown RBP16.54■□□□□ 0.24
ATG4D-206ENST00000586863 TTYH1Q9H313 450 aaPredicted RBP16.54■□□□□ 0.24
ATG4D-206ENST00000586863 CYP39A1Q9NYL5 469 aa16.54■□□□□ 0.24
ATG4D-206ENST00000586863 LAMA4Q16363 1823 aa16.54■□□□□ 0.24
ATG4D-206ENST00000586863 CHD9Q3L8U1 2897 aa16.53■□□□□ 0.24
ATG4D-206ENST00000586863 ZMYM6O95789 1325 aa16.53■□□□□ 0.24
ATG4D-206ENST00000586863 MROH7Q68CQ1 1323 aa16.53■□□□□ 0.24
ATG4D-206ENST00000586863 A0A0U1RQG5 324 aaPredicted RBP16.53■□□□□ 0.24
ATG4D-206ENST00000586863 ASB14A6NK59 587 aa16.53■□□□□ 0.24
ATG4D-206ENST00000586863 TIMP1P01033 207 aa16.53■□□□□ 0.24
ATG4D-206ENST00000586863 ICAM1P05362 532 aa16.53■□□□□ 0.24
ATG4D-206ENST00000586863 NKX3-2P78367 333 aa16.53■□□□□ 0.24
ATG4D-206ENST00000586863 TNFAIP2Q03169 654 aa16.53■□□□□ 0.24
ATG4D-206ENST00000586863 NSMFQ6X4W1 530 aa16.53■□□□□ 0.24
ATG4D-206ENST00000586863 FBXO16Q8IX29 292 aaPredicted RBP16.53■□□□□ 0.24
ATG4D-206ENST00000586863 VTI1AQ96AJ9 217 aa16.53■□□□□ 0.24
ATG4D-206ENST00000586863 CDX2Q99626 313 aaPredicted RBP16.53■□□□□ 0.24
ATG4D-206ENST00000586863 TMEM47Q9BQJ4 181 aa16.53■□□□□ 0.24
ATG4D-206ENST00000586863 SEMA6BQ9H3T3 888 aa16.53■□□□□ 0.24
ATG4D-206ENST00000586863 GNEQ9Y223 722 aaKnown RBP16.53■□□□□ 0.24
ATG4D-206ENST00000586863 FRMPD2Q68DX3 1309 aaPredicted RBP16.52■□□□□ 0.24
ATG4D-206ENST00000586863 CCDC171Q6TFL3 1326 aa16.52■□□□□ 0.24
ATG4D-206ENST00000586863 TRIM6-TRIM34B2RNG4 842 aa16.52■□□□□ 0.24
ATG4D-206ENST00000586863 ARVCFO00192 962 aa16.52■□□□□ 0.24
ATG4D-206ENST00000586863 TOP1P11387 765 aaKnown RBP16.52■□□□□ 0.24
ATG4D-206ENST00000586863 SMPD1P17405 629 aa16.52■□□□□ 0.24
ATG4D-206ENST00000586863 TMEM63BQ5T3F8 832 aa16.52■□□□□ 0.24
ATG4D-206ENST00000586863 SYDE2Q5VT97 1194 aa16.52■□□□□ 0.24
ATG4D-206ENST00000586863 BTNL9Q6UXG8 535 aa16.52■□□□□ 0.24
ATG4D-206ENST00000586863 NOL8Q76FK4 1167 aaKnown RBP16.52■□□□□ 0.24
ATG4D-206ENST00000586863 EEPD1Q7L9B9 569 aa16.52■□□□□ 0.24
ATG4D-206ENST00000586863 TLK2Q86UE8 772 aa16.52■□□□□ 0.24
ATG4D-206ENST00000586863 TBC1D10CQ8IV04 446 aa16.52■□□□□ 0.24
ATG4D-206ENST00000586863 FAM126BQ8IXS8 530 aa16.52■□□□□ 0.24
ATG4D-206ENST00000586863 PDGFCQ9NRA1 345 aa16.52■□□□□ 0.24
ATG4D-206ENST00000586863 B4GALNT3Q6L9W6 998 aa16.51■□□□□ 0.23
ATG4D-206ENST00000586863 MFSD5Q6N075 450 aa16.51■□□□□ 0.23
ATG4D-206ENST00000586863 TAPT1Q6NXT6 567 aa16.51■□□□□ 0.23
ATG4D-206ENST00000586863 CXCL17Q6UXB2 119 aa16.51■□□□□ 0.23
ATG4D-206ENST00000586863 TICAM2Q86XR7 235 aa16.51■□□□□ 0.23
ATG4D-206ENST00000586863 SMC5Q8IY18 1101 aa16.51■□□□□ 0.23
ATG4D-206ENST00000586863 GPCPD1Q9NPB8 672 aa16.51■□□□□ 0.23
ATG4D-206ENST00000586863 TCP11L1Q9NUJ3 509 aa16.51■□□□□ 0.23
ATG4D-206ENST00000586863 NFIBO00712 420 aa16.5■□□□□ 0.23
ATG4D-206ENST00000586863 PDHBP11177 359 aa16.5■□□□□ 0.23
ATG4D-206ENST00000586863 BAATQ14032 418 aaPredicted RBP16.5■□□□□ 0.23
ATG4D-206ENST00000586863 FSCN1Q16658 493 aaKnown RBP16.5■□□□□ 0.23
ATG4D-206ENST00000586863 RILPL2Q969X0 211 aa16.5■□□□□ 0.23
ATG4D-206ENST00000586863 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.5■□□□□ 0.23
ATG4D-206ENST00000586863 PPP1R12CQ9BZL4 782 aa16.5■□□□□ 0.23
ATG4D-206ENST00000586863 CHD7Q9P2D1 2997 aa16.5■□□□□ 0.23
ATG4D-206ENST00000586863 NEDD4P46934 1319 aa16.49■□□□□ 0.23
ATG4D-206ENST00000586863 DYNC1LI2O43237 492 aaPredicted RBP16.49■□□□□ 0.23
ATG4D-206ENST00000586863 CD4P01730 458 aa16.49■□□□□ 0.23
ATG4D-206ENST00000586863 AKNAD1Q5T1N1 836 aa16.49■□□□□ 0.23
ATG4D-206ENST00000586863 C16orf59Q7L2K0 433 aa16.49■□□□□ 0.23
ATG4D-206ENST00000586863 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.49■□□□□ 0.23
ATG4D-206ENST00000586863 MORC4Q8TE76 937 aa16.49■□□□□ 0.23
ATG4D-206ENST00000586863 MYLIPQ8WY64 445 aa16.49■□□□□ 0.23
ATG4D-206ENST00000586863 VTA1Q9NP79 307 aa16.49■□□□□ 0.23
ATG4D-206ENST00000586863 GRIN2DO15399 1336 aa16.48■□□□□ 0.23
ATG4D-206ENST00000586863 TLR3O15455 904 aaKnown RBP16.48■□□□□ 0.23
ATG4D-206ENST00000586863 SNHG28P0DPA3 235 aa16.48■□□□□ 0.23
ATG4D-206ENST00000586863 CSF2RAP15509 400 aa16.48■□□□□ 0.23
ATG4D-206ENST00000586863 SDSP20132 328 aa16.48■□□□□ 0.23
ATG4D-206ENST00000586863 ALDH5A1P51649 535 aaPredicted RBP16.48■□□□□ 0.23
ATG4D-206ENST00000586863 ZNF543Q08ER8 600 aa16.48■□□□□ 0.23
ATG4D-206ENST00000586863 PPIGQ13427 754 aaKnown RBP eCLIP16.48■□□□□ 0.234e-6■■□□□ 13.5
ATG4D-206ENST00000586863 TMEM240Q5SV17 173 aa16.48■□□□□ 0.23
ATG4D-206ENST00000586863 SLC30A10Q6XR72 485 aa16.48■□□□□ 0.23
ATG4D-206ENST00000586863 MFSD6Q6ZSS7 791 aa16.48■□□□□ 0.23
ATG4D-206ENST00000586863 PLEKHM2Q8IWE5 1019 aa16.48■□□□□ 0.23
ATG4D-206ENST00000586863 SLC43A3Q8NBI5 491 aa16.48■□□□□ 0.23
ATG4D-206ENST00000586863 CLEC4DQ8WXI8 215 aa16.48■□□□□ 0.23
ATG4D-206ENST00000586863 AP5M1Q9H0R1 490 aa16.48■□□□□ 0.23
ATG4D-206ENST00000586863 MYH6P13533 1939 aa16.48■□□□□ 0.23
ATG4D-206ENST00000586863 TMEM265A0A087WTH1 108 aa16.47■□□□□ 0.23
ATG4D-206ENST00000586863 PTPDC1A2A3K4 754 aa16.47■□□□□ 0.23
ATG4D-206ENST00000586863 IGHDP01880 384 aa16.47■□□□□ 0.23
ATG4D-206ENST00000586863 PCP11498 1178 aaKnown RBP16.47■□□□□ 0.23
ATG4D-206ENST00000586863 DNAJB2P25686 324 aa16.47■□□□□ 0.23
ATG4D-206ENST00000586863 CYP2C18P33260 490 aa16.47■□□□□ 0.23
ATG4D-206ENST00000586863 IQSEC1Q6DN90 963 aa16.47■□□□□ 0.23
ATG4D-206ENST00000586863 KIAA1211Q6ZU35 1233 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms