RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 PCDHA1Q9Y5I3 950 aa25.25■■□□□ 1.63
CIRBP-208ENST00000586548 TPM4P67936 248 aa25.24■■□□□ 1.63
CIRBP-208ENST00000586548 MIGA2Q7L4E1 593 aa25.24■■□□□ 1.63
CIRBP-208ENST00000586548 AK8Q96MA6 479 aa25.24■■□□□ 1.63
CIRBP-208ENST00000586548 SH2D4AQ9H788 454 aa25.24■■□□□ 1.63
CIRBP-208ENST00000586548 ZKSCAN5Q9Y2L8 839 aa25.24■■□□□ 1.63
CIRBP-208ENST00000586548 GOLGA6L6A8MZA4 724 aa25.23■■□□□ 1.63
CIRBP-208ENST00000586548 CDC25BP30305 580 aa25.23■■□□□ 1.63
CIRBP-208ENST00000586548 ECE1P42892 770 aa25.23■■□□□ 1.63
CIRBP-208ENST00000586548 IKQ13123 557 aaPredicted RBP25.23■■□□□ 1.63
CIRBP-208ENST00000586548 MORC3Q14149 939 aa25.23■■□□□ 1.63
CIRBP-208ENST00000586548 UBE2SQ16763 222 aa25.23■■□□□ 1.63
CIRBP-208ENST00000586548 ACER1Q8TDN7 264 aa25.23■■□□□ 1.63
CIRBP-208ENST00000586548 AMNQ9BXJ7 453 aa25.23■■□□□ 1.63
CIRBP-208ENST00000586548 CCSER1Q9C0I3 900 aa25.23■■□□□ 1.63
CIRBP-208ENST00000586548 ATAD5Q96QE3 1844 aa25.23■■□□□ 1.63
CIRBP-208ENST00000586548 MSNP26038 577 aaKnown RBP25.23■■□□□ 1.63
CIRBP-208ENST00000586548 PDXDC2PQ6P474 469 aa25.23■■□□□ 1.63
CIRBP-208ENST00000586548 DACH1Q9UI36 760 aa25.23■■□□□ 1.63
CIRBP-208ENST00000586548 CNOT7Q9UIV1 285 aaKnown RBP25.23■■□□□ 1.63
CIRBP-208ENST00000586548 GJA3Q9Y6H8 435 aa25.23■■□□□ 1.63
CIRBP-208ENST00000586548 EGFRP00533 1210 aa25.22■■□□□ 1.63
CIRBP-208ENST00000586548 ASNSP08243 561 aa25.22■■□□□ 1.63
CIRBP-208ENST00000586548 BMP6P22004 513 aa25.22■■□□□ 1.63
CIRBP-208ENST00000586548 AFMP43652 599 aa25.22■■□□□ 1.63
CIRBP-208ENST00000586548 NCAPHQ15003 741 aa25.22■■□□□ 1.63
CIRBP-208ENST00000586548 MLKLQ8NB16 471 aa25.22■■□□□ 1.63
CIRBP-208ENST00000586548 MRFAP1L1Q96HT8 127 aa25.22■■□□□ 1.63
CIRBP-208ENST00000586548 TPM3P06753 285 aa25.21■■□□□ 1.63
CIRBP-208ENST00000586548 DPYDQ12882 1025 aa25.21■■□□□ 1.63
CIRBP-208ENST00000586548 MCTP2Q6DN12 878 aa25.21■■□□□ 1.63
CIRBP-208ENST00000586548 FBXO11Q86XK2 927 aa25.21■■□□□ 1.63
CIRBP-208ENST00000586548 TEPSINQ96N21 525 aa25.21■■□□□ 1.63
CIRBP-208ENST00000586548 VCPKMTQ9H867 229 aa25.21■■□□□ 1.63
CIRBP-208ENST00000586548 DISC1Q9NRI5 854 aa25.21■■□□□ 1.63
CIRBP-208ENST00000586548 UBA7P41226 1012 aa25.2■■□□□ 1.63
CIRBP-208ENST00000586548 PPP4R3AQ6IN85 833 aa25.2■■□□□ 1.63
CIRBP-208ENST00000586548 POTEDQ86YR6 584 aa25.2■■□□□ 1.63
CIRBP-208ENST00000586548 SPICE1Q8N0Z3 855 aa25.2■■□□□ 1.63
CIRBP-208ENST00000586548 GSDMAQ96QA5 445 aa25.2■■□□□ 1.63
CIRBP-208ENST00000586548 NAP1L4Q99733 375 aaKnown RBP25.2■■□□□ 1.63
CIRBP-208ENST00000586548 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.2■■□□□ 1.63
CIRBP-208ENST00000586548 MYH7BA7E2Y1 1941 aa25.2■■□□□ 1.63
CIRBP-208ENST00000586548 EDIL3O43854 480 aa25.2■■□□□ 1.62
CIRBP-208ENST00000586548 CLCN1P35523 988 aa25.2■■□□□ 1.62
CIRBP-208ENST00000586548 STAT2P52630 851 aa25.2■■□□□ 1.62
CIRBP-208ENST00000586548 MYL5Q02045 173 aa25.2■■□□□ 1.62
CIRBP-208ENST00000586548 KARSQ15046 597 aaKnown RBP25.2■■□□□ 1.62
CIRBP-208ENST00000586548 SAMD7Q7Z3H4 446 aa25.2■■□□□ 1.62
CIRBP-208ENST00000586548 MTMR9Q96QG7 549 aa25.2■■□□□ 1.62
CIRBP-208ENST00000586548 RTN4Q9NQC3 1192 aaKnown RBP25.2■■□□□ 1.62
CIRBP-208ENST00000586548 PRR12Q9ULL5 1215 aa25.2■■□□□ 1.62
CIRBP-208ENST00000586548 DICER1Q9UPY3 1922 aaKnown RBP25.19■■□□□ 1.62
CIRBP-208ENST00000586548 ZNF541Q9H0D2 1346 aa25.19■■□□□ 1.62
CIRBP-208ENST00000586548 GCFC2P16383 781 aaKnown RBP25.19■■□□□ 1.62
CIRBP-208ENST00000586548 STAT6P42226 847 aa25.19■■□□□ 1.62
CIRBP-208ENST00000586548 TRAF1Q13077 416 aa25.19■■□□□ 1.62
CIRBP-208ENST00000586548 AP3B2Q13367 1082 aa25.19■■□□□ 1.62
CIRBP-208ENST00000586548 CALCRLQ16602 461 aa25.19■■□□□ 1.62
CIRBP-208ENST00000586548 KIAA1755Q5JYT7 1200 aa25.19■■□□□ 1.62
CIRBP-208ENST00000586548 SPC24Q8NBT2 197 aa25.19■■□□□ 1.62
CIRBP-208ENST00000586548 SPON1Q9HCB6 807 aa25.19■■□□□ 1.62
CIRBP-208ENST00000586548 GINM1Q9NU53 330 aa25.19■■□□□ 1.62
CIRBP-208ENST00000586548 PHF20L1A8MW92 1017 aa25.18■■□□□ 1.62
CIRBP-208ENST00000586548 GTPBP6O43824 516 aaPredicted RBP25.18■■□□□ 1.62
CIRBP-208ENST00000586548 PLA2G6O60733 806 aa25.18■■□□□ 1.62
CIRBP-208ENST00000586548 CDC25AP30304 524 aa25.18■■□□□ 1.62
CIRBP-208ENST00000586548 KIF4BQ2VIQ3 1234 aa25.18■■□□□ 1.62
CIRBP-208ENST00000586548 TBC1D10BQ4KMP7 808 aaPredicted RBP25.18■■□□□ 1.62
CIRBP-208ENST00000586548 CT47A1Q5JQC4 288 aaPredicted RBP25.18■■□□□ 1.62
CIRBP-208ENST00000586548 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.18■■□□□ 1.62
CIRBP-208ENST00000586548 PP2D1A8MPX8 630 aa25.17■■□□□ 1.62
CIRBP-208ENST00000586548 TDP2O95551 362 aa25.17■■□□□ 1.62
CIRBP-208ENST00000586548 FAM83BQ5T0W9 1011 aa25.17■■□□□ 1.62
CIRBP-208ENST00000586548 RRAGBQ5VZM2 374 aa25.17■■□□□ 1.62
CIRBP-208ENST00000586548 IGSF22Q8N9C0 903 aa25.17■■□□□ 1.62
CIRBP-208ENST00000586548 HACL1Q9UJ83 578 aa25.17■■□□□ 1.62
CIRBP-208ENST00000586548 SLC37A4O43826 429 aa25.17■■□□□ 1.62
CIRBP-208ENST00000586548 FXR2P51116 673 aaKnown RBP eCLIP25.17■■□□□ 1.62
CIRBP-208ENST00000586548 TEX2Q8IWB9 1127 aa25.17■■□□□ 1.62
CIRBP-208ENST00000586548 DRC7Q8IY82 874 aa25.17■■□□□ 1.62
CIRBP-208ENST00000586548 RASSF8Q8NHQ8 419 aa25.17■■□□□ 1.62
CIRBP-208ENST00000586548 CHURC1Q8WUH1 139 aa25.17■■□□□ 1.62
CIRBP-208ENST00000586548 CUEDC2Q9H467 287 aa25.17■■□□□ 1.62
CIRBP-208ENST00000586548 USP17L15C9J2P7 530 aa25.16■■□□□ 1.62
CIRBP-208ENST00000586548 USP17L13C9JLJ4 530 aa25.16■■□□□ 1.62
CIRBP-208ENST00000586548 USP17L11C9JVI0 530 aa25.16■■□□□ 1.62
CIRBP-208ENST00000586548 USP17L18D6R9N7 530 aa25.16■■□□□ 1.62
CIRBP-208ENST00000586548 USP17L22D6RA61 530 aa25.16■■□□□ 1.62
CIRBP-208ENST00000586548 USP17L17D6RBQ6 530 aa25.16■■□□□ 1.62
CIRBP-208ENST00000586548 USP17L19D6RCP7 530 aa25.16■■□□□ 1.62
CIRBP-208ENST00000586548 USP17L20D6RJB6 530 aa25.16■■□□□ 1.62
CIRBP-208ENST00000586548 SNAP25P60880 206 aa25.16■■□□□ 1.62
CIRBP-208ENST00000586548 USP17L24Q0WX57 530 aa25.16■■□□□ 1.62
CIRBP-208ENST00000586548 USP17L6PQ6QN14 398 aa25.16■■□□□ 1.62
CIRBP-208ENST00000586548 CABP7Q86V35 215 aa25.16■■□□□ 1.62
CIRBP-208ENST00000586548 ANO3Q9BYT9 981 aa25.16■■□□□ 1.62
CIRBP-208ENST00000586548 MAGEF1Q9HAY2 307 aa25.16■■□□□ 1.62
CIRBP-208ENST00000586548 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.16■■□□□ 1.62
CIRBP-208ENST00000586548 H7C1D1 291 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms