RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 TSKSQ9UJT2 592 aa15.72■□□□□ 0.11
VMP1-203ENST00000586245 COL11A1P12107 1806 aaPredicted RBP15.72■□□□□ 0.11
VMP1-203ENST00000586245 BAZ2BQ9UIF8 2168 aaKnown RBP15.71■□□□□ 0.11
VMP1-203ENST00000586245 FKTNO75072 461 aa15.71■□□□□ 0.11
VMP1-203ENST00000586245 HSP90AA1P07900 732 aaKnown RBP15.71■□□□□ 0.11
VMP1-203ENST00000586245 XBP1P17861 261 aa15.71■□□□□ 0.11
VMP1-203ENST00000586245 NAPAP54920 295 aa15.71■□□□□ 0.11
VMP1-203ENST00000586245 PKN1Q16512 942 aa15.71■□□□□ 0.11
VMP1-203ENST00000586245 NOM1Q5C9Z4 860 aaKnown RBP15.71■□□□□ 0.11
VMP1-203ENST00000586245 WWC2Q6AWC2 1192 aa15.71■□□□□ 0.11
VMP1-203ENST00000586245 FAM184AQ8NB25 1140 aa15.71■□□□□ 0.11
VMP1-203ENST00000586245 GPKOWQ92917 476 aaPredicted RBP eCLIP15.71■□□□□ 0.11
VMP1-203ENST00000586245 PORCNQ9H237 461 aa15.71■□□□□ 0.11
VMP1-203ENST00000586245 ACAD9Q9H845 621 aa15.71■□□□□ 0.11
VMP1-203ENST00000586245 EFCC1Q9HA90 598 aa15.71■□□□□ 0.11
VMP1-203ENST00000586245 TSHZ2Q9NRE2 1034 aa15.71■□□□□ 0.11
VMP1-203ENST00000586245 SMC3Q9UQE7 1217 aa15.71■□□□□ 0.11
VMP1-203ENST00000586245 KIF3AQ9Y496 699 aa15.71■□□□□ 0.11
VMP1-203ENST00000586245 RIPK3Q9Y572 518 aa15.71■□□□□ 0.11
VMP1-203ENST00000586245 DTNBO60941 627 aa15.7■□□□□ 0.1
VMP1-203ENST00000586245 HSPA1AP0DMV8 641 aaKnown RBP15.7■□□□□ 0.1
VMP1-203ENST00000586245 HSPA1BP0DMV9 641 aaKnown RBP15.7■□□□□ 0.1
VMP1-203ENST00000586245 TAL1P17542 331 aaPredicted RBP15.7■□□□□ 0.1
VMP1-203ENST00000586245 FCGRTP55899 365 aa15.7■□□□□ 0.1
VMP1-203ENST00000586245 LACTBP83111 547 aaPredicted RBP15.7■□□□□ 0.1
VMP1-203ENST00000586245 PPP1R18Q6NYC8 613 aa15.7■□□□□ 0.1
VMP1-203ENST00000586245 MCF2L2Q86YR7 1114 aa15.7■□□□□ 0.1
VMP1-203ENST00000586245 CCDC12Q8WUD4 166 aaPredicted RBP15.7■□□□□ 0.1
VMP1-203ENST00000586245 ERO1AQ96HE7 468 aa15.7■□□□□ 0.1
VMP1-203ENST00000586245 INTS4Q96HW7 963 aaKnown RBP15.7■□□□□ 0.1
VMP1-203ENST00000586245 ALG1Q9BT22 464 aa15.7■□□□□ 0.1
VMP1-203ENST00000586245 BARHL2Q9NY43 387 aa15.7■□□□□ 0.1
VMP1-203ENST00000586245 IVNS1ABPQ9Y6Y0 642 aa15.7■□□□□ 0.1
VMP1-203ENST00000586245 STXBP3O00186 592 aa15.69■□□□□ 0.1
VMP1-203ENST00000586245 ECM2O94769 699 aaPredicted RBP15.69■□□□□ 0.1
VMP1-203ENST00000586245 ARHGEF6Q15052 776 aa15.69■□□□□ 0.1
VMP1-203ENST00000586245 MUM1L1Q5H9M0 696 aa15.69■□□□□ 0.1
VMP1-203ENST00000586245 PLEKHH3Q7Z736 793 aa15.69■□□□□ 0.1
VMP1-203ENST00000586245 CCDC148Q8NFR7 591 aa15.69■□□□□ 0.1
VMP1-203ENST00000586245 ZNF296Q8WUU4 475 aaPredicted RBP15.69■□□□□ 0.1
VMP1-203ENST00000586245 MYH6P13533 1939 aa15.68■□□□□ 0.1
VMP1-203ENST00000586245 TNPO2O14787 897 aaKnown RBP15.68■□□□□ 0.1
VMP1-203ENST00000586245 STRNO43815 780 aa15.68■□□□□ 0.1
VMP1-203ENST00000586245 FCER1AP12319 257 aa15.68■□□□□ 0.1
VMP1-203ENST00000586245 FDPSP14324 419 aaKnown RBP15.68■□□□□ 0.1
VMP1-203ENST00000586245 GJB2P29033 226 aa15.68■□□□□ 0.1
VMP1-203ENST00000586245 PSMC4P43686 418 aa15.68■□□□□ 0.1
VMP1-203ENST00000586245 TRIM29Q14134 588 aa15.68■□□□□ 0.1
VMP1-203ENST00000586245 KCTD2Q14681 263 aa15.68■□□□□ 0.1
VMP1-203ENST00000586245 NSMFQ6X4W1 530 aa15.68■□□□□ 0.1
VMP1-203ENST00000586245 GPR142Q7Z601 462 aa15.68■□□□□ 0.1
VMP1-203ENST00000586245 ANKRD35Q8N283 1001 aa15.68■□□□□ 0.1
VMP1-203ENST00000586245 CD99L2Q8TCZ2 262 aa15.68■□□□□ 0.1
VMP1-203ENST00000586245 CLEC4DQ8WXI8 215 aa15.68■□□□□ 0.1
VMP1-203ENST00000586245 MMP19Q99542 508 aa15.68■□□□□ 0.1
VMP1-203ENST00000586245 MAF1Q9H063 256 aa15.68■□□□□ 0.1
VMP1-203ENST00000586245 SH3GLB2Q9NR46 395 aa15.68■□□□□ 0.1
VMP1-203ENST00000586245 FOXD4L1Q9NU39 408 aa15.68■□□□□ 0.1
VMP1-203ENST00000586245 VPS54Q9P1Q0 977 aa15.68■□□□□ 0.1
VMP1-203ENST00000586245 PCNTO95613 3336 aa15.68■□□□□ 0.1
VMP1-203ENST00000586245 NFIBO00712 420 aa15.67■□□□□ 0.1
VMP1-203ENST00000586245 FOXN1O15353 648 aa15.67■□□□□ 0.1
VMP1-203ENST00000586245 CFBP00751 764 aa15.67■□□□□ 0.1
VMP1-203ENST00000586245 CTCFP49711 727 aaPredicted RBP15.67■□□□□ 0.1
VMP1-203ENST00000586245 NLRP5P59047 1200 aa15.67■□□□□ 0.1
VMP1-203ENST00000586245 ABRAQ8N0Z2 381 aa15.67■□□□□ 0.1
VMP1-203ENST00000586245 FAM177A1Q8N128 213 aaPredicted RBP15.67■□□□□ 0.1
VMP1-203ENST00000586245 SAMD3Q8N6K7 520 aa15.67■□□□□ 0.1
VMP1-203ENST00000586245 CUL5Q93034 780 aa15.67■□□□□ 0.1
VMP1-203ENST00000586245 AIFM3Q96NN9 605 aa15.67■□□□□ 0.1
VMP1-203ENST00000586245 GLT8D2Q9H1C3 349 aa15.67■□□□□ 0.1
VMP1-203ENST00000586245 C6orf50Q9HD87 102 aa15.67■□□□□ 0.1
VMP1-203ENST00000586245 RBM19Q9Y4C8 960 aaKnown RBP15.67■□□□□ 0.1
VMP1-203ENST00000586245 PFASO15067 1338 aa15.67■□□□□ 0.1
VMP1-203ENST00000586245 SMCO2A6NFE2 343 aa15.66■□□□□ 0.1
VMP1-203ENST00000586245 SLC15A5A6NIM6 579 aa15.66■□□□□ 0.1
VMP1-203ENST00000586245 HSPA8P11142 646 aaKnown RBP15.66■□□□□ 0.1
VMP1-203ENST00000586245 PTPREP23469 700 aa15.66■□□□□ 0.1
VMP1-203ENST00000586245 HOXD10P28358 340 aa15.66■□□□□ 0.1
VMP1-203ENST00000586245 GNA11P29992 359 aa15.66■□□□□ 0.1
VMP1-203ENST00000586245 ADCY7P51828 1080 aa15.66■□□□□ 0.1
VMP1-203ENST00000586245 MRPL12P52815 198 aaKnown RBP15.66■□□□□ 0.1
VMP1-203ENST00000586245 TYW1BQ6NUM6 668 aa15.66■□□□□ 0.1
VMP1-203ENST00000586245 RNF207Q6ZRF8 634 aa15.66■□□□□ 0.1
VMP1-203ENST00000586245 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.66■□□□□ 0.1
VMP1-203ENST00000586245 RGS22Q8NE09 1264 aa15.66■□□□□ 0.1
VMP1-203ENST00000586245 TRIM47Q96LD4 638 aa15.66■□□□□ 0.1
VMP1-203ENST00000586245 ARHGAP39Q9C0H5 1083 aa15.66■□□□□ 0.1
VMP1-203ENST00000586245 PSTPIP2Q9H939 334 aa15.66■□□□□ 0.1
VMP1-203ENST00000586245 A1CFQ9NQ94 594 aaKnown RBP15.66■□□□□ 0.1
VMP1-203ENST00000586245 DAXXQ9UER7 740 aaPredicted RBP15.66■□□□□ 0.1
VMP1-203ENST00000586245 ESYT2A0FGR8 921 aa15.65■□□□□ 0.1
VMP1-203ENST00000586245 GCOM1H8Y6P7 765 aaPredicted RBP15.65■□□□□ 0.1
VMP1-203ENST00000586245 POLR2MP0CAP2 368 aa15.65■□□□□ 0.1
VMP1-203ENST00000586245 CALML3P27482 149 aa15.65■□□□□ 0.1
VMP1-203ENST00000586245 ADORA2AP29274 412 aa15.65■□□□□ 0.1
VMP1-203ENST00000586245 FOSBP53539 338 aa15.65■□□□□ 0.1
VMP1-203ENST00000586245 BAATQ14032 418 aaPredicted RBP15.65■□□□□ 0.1
VMP1-203ENST00000586245 GRB14Q14449 540 aa15.65■□□□□ 0.1
VMP1-203ENST00000586245 TEX2Q8IWB9 1127 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms