RNA–Protein interactions for RNA: ENST00000585903.1

MBD3-203, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 415 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-203ENST00000585903 A1CFQ9NQ94 594 aaKnown RBP12.52□□□□□ -0.41
MBD3-203ENST00000585903 RNF146Q9NTX7 359 aa12.52□□□□□ -0.41
MBD3-203ENST00000585903 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.51□□□□□ -0.41
MBD3-203ENST00000585903 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.51□□□□□ -0.41
MBD3-203ENST00000585903 ARVCFO00192 962 aa12.51□□□□□ -0.41
MBD3-203ENST00000585903 TLR3O15455 904 aaKnown RBP12.51□□□□□ -0.41
MBD3-203ENST00000585903 ICAM1P05362 532 aa12.51□□□□□ -0.41
MBD3-203ENST00000585903 PPIGQ13427 754 aaKnown RBP eCLIP12.51□□□□□ -0.414e-9■■□□□ 13.7
MBD3-203ENST00000585903 GNASQ5JWF2 1037 aa12.51□□□□□ -0.41
MBD3-203ENST00000585903 IQSEC1Q6DN90 963 aa12.51□□□□□ -0.41
MBD3-203ENST00000585903 B4GALNT3Q6L9W6 998 aa12.51□□□□□ -0.41
MBD3-203ENST00000585903 STK11IPQ8N1F8 1099 aa12.51□□□□□ -0.41
MBD3-203ENST00000585903 SLC43A3Q8NBI5 491 aa12.51□□□□□ -0.41
MBD3-203ENST00000585903 IL17RBQ9NRM6 502 aa12.51□□□□□ -0.41
MBD3-203ENST00000585903 STX8Q9UNK0 236 aa12.51□□□□□ -0.41
MBD3-203ENST00000585903 GNEQ9Y223 722 aaKnown RBP12.51□□□□□ -0.41
MBD3-203ENST00000585903 LCTP09848 1927 aa12.5□□□□□ -0.41
MBD3-203ENST00000585903 CTAGE5O15320 804 aa12.5□□□□□ -0.41
MBD3-203ENST00000585903 ADCY6O43306 1168 aa12.5□□□□□ -0.41
MBD3-203ENST00000585903 ZEB2O60315 1214 aa12.5□□□□□ -0.41
MBD3-203ENST00000585903 MCCP23508 829 aa12.5□□□□□ -0.41
MBD3-203ENST00000585903 PDE1AP54750 535 aa12.5□□□□□ -0.41
MBD3-203ENST00000585903 TNFAIP2Q03169 654 aa12.5□□□□□ -0.41
MBD3-203ENST00000585903 IKQ13123 557 aaPredicted RBP12.5□□□□□ -0.41
MBD3-203ENST00000585903 RASIP1Q5U651 963 aa12.5□□□□□ -0.41
MBD3-203ENST00000585903 FAM126BQ8IXS8 530 aa12.5□□□□□ -0.41
MBD3-203ENST00000585903 TMEM199Q8N511 208 aa12.5□□□□□ -0.41
MBD3-203ENST00000585903 OTUD7AQ8TE49 926 aaPredicted RBP12.5□□□□□ -0.41
MBD3-203ENST00000585903 LENG1Q96BZ8 264 aaPredicted RBP12.5□□□□□ -0.41
MBD3-203ENST00000585903 TTC14Q96N46 770 aa12.5□□□□□ -0.41
MBD3-203ENST00000585903 TRERF1Q96PN7 1200 aa12.5□□□□□ -0.41
MBD3-203ENST00000585903 RANBP17Q9H2T7 1088 aaKnown RBP12.5□□□□□ -0.41
MBD3-203ENST00000585903 VTA1Q9NP79 307 aa12.5□□□□□ -0.41
MBD3-203ENST00000585903 CYP39A1Q9NYL5 469 aa12.5□□□□□ -0.41
MBD3-203ENST00000585903 ADD3Q9UEY8 706 aaKnown RBP12.5□□□□□ -0.41
MBD3-203ENST00000585903 PRR12Q9ULL5 1215 aa12.5□□□□□ -0.41
MBD3-203ENST00000585903 MYADML2A6NDP7 307 aa12.49□□□□□ -0.41
MBD3-203ENST00000585903 CD4P01730 458 aa12.49□□□□□ -0.41
MBD3-203ENST00000585903 TOP1P11387 765 aaKnown RBP12.49□□□□□ -0.41
MBD3-203ENST00000585903 MFAP1P55081 439 aaKnown RBP12.49□□□□□ -0.41
MBD3-203ENST00000585903 CNTN2Q02246 1040 aa12.49□□□□□ -0.41
MBD3-203ENST00000585903 MCMDC2Q4G0Z9 681 aa12.49□□□□□ -0.41
MBD3-203ENST00000585903 PSRC1Q6PGN9 363 aaPredicted RBP12.49□□□□□ -0.41
MBD3-203ENST00000585903 CHD1LQ86WJ1 897 aa12.49□□□□□ -0.41
MBD3-203ENST00000585903 AGBL1Q96MI9 1066 aa12.49□□□□□ -0.41
MBD3-203ENST00000585903 HOMER2Q9NSB8 354 aa12.49□□□□□ -0.41
MBD3-203ENST00000585903 RAPGEFL1Q9UHV5 662 aa12.49□□□□□ -0.41
MBD3-203ENST00000585903 WDR19Q8NEZ3 1342 aa12.48□□□□□ -0.41
MBD3-203ENST00000585903 SOWAHBA6NEL2 793 aa12.48□□□□□ -0.41
MBD3-203ENST00000585903 TNFRSF10AO00220 468 aa12.48□□□□□ -0.41
MBD3-203ENST00000585903 RANBP6O60518 1105 aaKnown RBP12.48□□□□□ -0.41
MBD3-203ENST00000585903 ALAS1P13196 640 aa12.48□□□□□ -0.41
MBD3-203ENST00000585903 PLA2G5P39877 138 aa12.48□□□□□ -0.41
MBD3-203ENST00000585903 EPHB4P54760 987 aa12.48□□□□□ -0.41
MBD3-203ENST00000585903 NUCB1Q02818 461 aa12.48□□□□□ -0.41
MBD3-203ENST00000585903 FSCN1Q16658 493 aaKnown RBP12.48□□□□□ -0.41
MBD3-203ENST00000585903 TLK2Q86UE8 772 aa12.48□□□□□ -0.41
MBD3-203ENST00000585903 MYLIPQ8WY64 445 aa12.48□□□□□ -0.41
MBD3-203ENST00000585903 AP5M1Q9H0R1 490 aa12.48□□□□□ -0.41
MBD3-203ENST00000585903 TTYH1Q9H313 450 aaPredicted RBP12.48□□□□□ -0.41
MBD3-203ENST00000585903 CCPG1Q9ULG6 757 aa12.48□□□□□ -0.41
MBD3-203ENST00000585903 LAMA4Q16363 1823 aa12.48□□□□□ -0.41
MBD3-203ENST00000585903 FGAP02671 866 aa12.47□□□□□ -0.41
MBD3-203ENST00000585903 SNHG28P0DPA3 235 aa12.47□□□□□ -0.41
MBD3-203ENST00000585903 SLC4A3P48751 1232 aa12.47□□□□□ -0.41
MBD3-203ENST00000585903 CTDSPL2Q05D32 466 aa12.47□□□□□ -0.41
MBD3-203ENST00000585903 CCDC178Q5BJE1 867 aa12.47□□□□□ -0.41
MBD3-203ENST00000585903 TAPT1Q6NXT6 567 aa12.47□□□□□ -0.41
MBD3-203ENST00000585903 KCTD1Q719H9 257 aa12.47□□□□□ -0.41
MBD3-203ENST00000585903 RGS22Q8NE09 1264 aa12.47□□□□□ -0.41
MBD3-203ENST00000585903 MPHOSPH6Q99547 160 aaKnown RBP12.47□□□□□ -0.41
MBD3-203ENST00000585903 LNPKQ9C0E8 428 aa12.47□□□□□ -0.41
MBD3-203ENST00000585903 MTIF3Q9H2K0 278 aaKnown RBP12.47□□□□□ -0.41
MBD3-203ENST00000585903 RNF41Q9H4P4 317 aaPredicted RBP12.47□□□□□ -0.41
MBD3-203ENST00000585903 CHD9Q3L8U1 2897 aa12.46□□□□□ -0.41
MBD3-203ENST00000585903 ASTN1O14525 1302 aa12.46□□□□□ -0.41
MBD3-203ENST00000585903 RBM47A0AV96 593 aaKnown RBP12.46□□□□□ -0.41
MBD3-203ENST00000585903 NKRFO15226 690 aaKnown RBP eCLIP12.46□□□□□ -0.41
MBD3-203ENST00000585903 NMT2O60551 498 aa12.46□□□□□ -0.41
MBD3-203ENST00000585903 HSPD1P10809 573 aaKnown RBP12.46□□□□□ -0.41
MBD3-203ENST00000585903 DNAJB2P25686 324 aa12.46□□□□□ -0.41
MBD3-203ENST00000585903 DUSP28Q4G0W2 176 aa12.46□□□□□ -0.41
MBD3-203ENST00000585903 MUM1L1Q5H9M0 696 aa12.46□□□□□ -0.41
MBD3-203ENST00000585903 TJAP1Q5JTD0 557 aa12.46□□□□□ -0.41
MBD3-203ENST00000585903 TMEM240Q5SV17 173 aa12.46□□□□□ -0.41
MBD3-203ENST00000585903 GPATCH4Q5T3I0 446 aaKnown RBP12.46□□□□□ -0.41
MBD3-203ENST00000585903 VPS53Q5VIR6 699 aa12.46□□□□□ -0.41
MBD3-203ENST00000585903 SYDE2Q5VT97 1194 aa12.46□□□□□ -0.41
MBD3-203ENST00000585903 DNERQ8NFT8 737 aa12.46□□□□□ -0.41
MBD3-203ENST00000585903 VTI1AQ96AJ9 217 aa12.46□□□□□ -0.41
MBD3-203ENST00000585903 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.46□□□□□ -0.41
MBD3-203ENST00000585903 OSBPL3Q9H4L5 887 aa12.46□□□□□ -0.41
MBD3-203ENST00000585903 ISY1Q9ULR0 285 aaKnown RBP12.46□□□□□ -0.41
MBD3-203ENST00000585903 BDP1A6H8Y1 2624 aa12.46□□□□□ -0.42
MBD3-203ENST00000585903 SCN10AQ9Y5Y9 1956 aa12.45□□□□□ -0.42
MBD3-203ENST00000585903 CCDC171Q6TFL3 1326 aa12.45□□□□□ -0.42
MBD3-203ENST00000585903 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.45□□□□□ -0.42
MBD3-203ENST00000585903 B4DLN1 442 aa12.45□□□□□ -0.42
MBD3-203ENST00000585903 PFKMP08237 780 aa12.45□□□□□ -0.42
MBD3-203ENST00000585903 PDHBP11177 359 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms