RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 ZCCHC17Q9NP64 241 aaKnown RBP19.49■□□□□ 0.71
HMG20B-215ENST00000585741 VWA5AO00534 786 aa19.48■□□□□ 0.71
HMG20B-215ENST00000585741 FDPSP14324 419 aaKnown RBP19.48■□□□□ 0.71
HMG20B-215ENST00000585741 MOGSQ13724 837 aa19.48■□□□□ 0.71
HMG20B-215ENST00000585741 PLS1Q14651 629 aa19.48■□□□□ 0.71
HMG20B-215ENST00000585741 SAFBQ15424 915 aaKnown RBP eCLIP19.48■□□□□ 0.71
HMG20B-215ENST00000585741 USH1GQ495M9 461 aa19.48■□□□□ 0.71
HMG20B-215ENST00000585741 HABP4Q5JVS0 413 aaKnown RBP19.48■□□□□ 0.71
HMG20B-215ENST00000585741 GPKOWQ92917 476 aaPredicted RBP eCLIP19.48■□□□□ 0.71
HMG20B-215ENST00000585741 P2RX7Q99572 595 aaKnown RBP19.48■□□□□ 0.71
HMG20B-215ENST00000585741 PCDHA1Q9Y5I3 950 aa19.48■□□□□ 0.71
HMG20B-215ENST00000585741 VPS37CA5D8V6 355 aaPredicted RBP19.47■□□□□ 0.71
HMG20B-215ENST00000585741 SPDYE16A6NNV3 312 aaPredicted RBP19.47■□□□□ 0.71
HMG20B-215ENST00000585741 CTGFP29279 349 aa19.47■□□□□ 0.71
HMG20B-215ENST00000585741 NLRP5P59047 1200 aa19.47■□□□□ 0.71
HMG20B-215ENST00000585741 HERVK_113P62684 666 aa19.47■□□□□ 0.71
HMG20B-215ENST00000585741 LACTBP83111 547 aaPredicted RBP19.47■□□□□ 0.71
HMG20B-215ENST00000585741 PKN1Q16512 942 aa19.47■□□□□ 0.71
HMG20B-215ENST00000585741 SLC35G1Q2M3R5 365 aa19.47■□□□□ 0.71
HMG20B-215ENST00000585741 MTMR8Q96EF0 704 aa19.47■□□□□ 0.71
HMG20B-215ENST00000585741 PAGR1Q9BTK6 254 aa19.47■□□□□ 0.71
HMG20B-215ENST00000585741 SLC38A10Q9HBR0 1119 aa19.47■□□□□ 0.71
HMG20B-215ENST00000585741 RAVER2Q9HCJ3 691 aaKnown RBP19.47■□□□□ 0.71
HMG20B-215ENST00000585741 SH3GLB2Q9NR46 395 aa19.47■□□□□ 0.71
HMG20B-215ENST00000585741 VPS54Q9P1Q0 977 aa19.47■□□□□ 0.71
HMG20B-215ENST00000585741 CCPG1Q9ULG6 757 aa19.47■□□□□ 0.71
HMG20B-215ENST00000585741 LOC285556D6RIA3 1793 aa19.47■□□□□ 0.71
HMG20B-215ENST00000585741 ICAM1P05362 532 aa19.46■□□□□ 0.71
HMG20B-215ENST00000585741 WWC2Q6AWC2 1192 aa19.46■□□□□ 0.71
HMG20B-215ENST00000585741 C17orf99Q6UX52 265 aa19.46■□□□□ 0.71
HMG20B-215ENST00000585741 COA7Q96BR5 231 aa19.46■□□□□ 0.71
HMG20B-215ENST00000585741 AIFM3Q96NN9 605 aa19.46■□□□□ 0.71
HMG20B-215ENST00000585741 BARHL2Q9NY43 387 aa19.46■□□□□ 0.71
HMG20B-215ENST00000585741 MRPL11Q9Y3B7 192 aaKnown RBP19.46■□□□□ 0.71
HMG20B-215ENST00000585741 PTPRFP10586 1907 aa19.46■□□□□ 0.71
HMG20B-215ENST00000585741 ADGRA2Q96PE1 1338 aa19.46■□□□□ 0.71
HMG20B-215ENST00000585741 STX6O43752 255 aa19.45■□□□□ 0.7
HMG20B-215ENST00000585741 CYP2C8P10632 490 aa19.45■□□□□ 0.7
HMG20B-215ENST00000585741 CALML3P27482 149 aa19.45■□□□□ 0.7
HMG20B-215ENST00000585741 OAZ1P54368 228 aa19.45■□□□□ 0.7
HMG20B-215ENST00000585741 GUCY1B3Q02153 619 aa19.45■□□□□ 0.7
HMG20B-215ENST00000585741 SLC9C1Q4G0N8 1177 aa19.45■□□□□ 0.7
HMG20B-215ENST00000585741 MCTP1Q6DN14 999 aa19.45■□□□□ 0.7
HMG20B-215ENST00000585741 PPP1R18Q6NYC8 613 aa19.45■□□□□ 0.7
HMG20B-215ENST00000585741 FAM177A1Q8N128 213 aaPredicted RBP19.45■□□□□ 0.7
HMG20B-215ENST00000585741 C6orf50Q9HD87 102 aa19.45■□□□□ 0.7
HMG20B-215ENST00000585741 ABCB11O95342 1321 aa19.45■□□□□ 0.7
HMG20B-215ENST00000585741 ALAS1P13196 640 aa19.44■□□□□ 0.7
HMG20B-215ENST00000585741 SYT1P21579 422 aa19.44■□□□□ 0.7
HMG20B-215ENST00000585741 GNA11P29992 359 aa19.44■□□□□ 0.7
HMG20B-215ENST00000585741 GCLCP48506 637 aaPredicted RBP19.44■□□□□ 0.7
HMG20B-215ENST00000585741 NUCB2P80303 420 aa19.44■□□□□ 0.7
HMG20B-215ENST00000585741 ARHGEF6Q15052 776 aa19.44■□□□□ 0.7
HMG20B-215ENST00000585741 KRT40Q6A162 431 aa19.44■□□□□ 0.7
HMG20B-215ENST00000585741 LBX2Q6XYB7 198 aa19.44■□□□□ 0.7
HMG20B-215ENST00000585741 CCAR1Q8IX12 1150 aaKnown RBP19.44■□□□□ 0.7
HMG20B-215ENST00000585741 BICD2Q8TD16 824 aa19.44■□□□□ 0.7
HMG20B-215ENST00000585741 TMEM106CQ9BVX2 250 aa19.44■□□□□ 0.7
HMG20B-215ENST00000585741 TEX13BQ9BXU2 312 aa19.44■□□□□ 0.7
HMG20B-215ENST00000585741 GLT8D2Q9H1C3 349 aa19.44■□□□□ 0.7
HMG20B-215ENST00000585741 RABGAP1Q9Y3P9 1069 aa19.44■□□□□ 0.7
HMG20B-215ENST00000585741 SMCO2A6NFE2 343 aa19.43■□□□□ 0.7
HMG20B-215ENST00000585741 STXBP3O00186 592 aa19.43■□□□□ 0.7
HMG20B-215ENST00000585741 STAT3P40763 770 aa19.43■□□□□ 0.7
HMG20B-215ENST00000585741 CCNA1P78396 465 aa19.43■□□□□ 0.7
HMG20B-215ENST00000585741 SNRNP48Q6IEG0 339 aaKnown RBP19.43■□□□□ 0.7
HMG20B-215ENST00000585741 FBXO18Q8NFZ0 1043 aa19.43■□□□□ 0.7
HMG20B-215ENST00000585741 SH3TC2Q8TF17 1288 aa19.43■□□□□ 0.7
HMG20B-215ENST00000585741 CUL5Q93034 780 aa19.43■□□□□ 0.7
HMG20B-215ENST00000585741 AGBL1Q96MI9 1066 aa19.43■□□□□ 0.7
HMG20B-215ENST00000585741 CIZ1Q9ULV3 898 aaPredicted RBP19.43■□□□□ 0.7
HMG20B-215ENST00000585741 ADAMTS5Q9UNA0 930 aa19.43■□□□□ 0.7
HMG20B-215ENST00000585741 BAZ2BQ9UIF8 2168 aaKnown RBP19.43■□□□□ 0.7
HMG20B-215ENST00000585741 COPB2P35606 906 aa19.42■□□□□ 0.7
HMG20B-215ENST00000585741 ADCY7P51828 1080 aa19.42■□□□□ 0.7
HMG20B-215ENST00000585741 MRPL12P52815 198 aaKnown RBP19.42■□□□□ 0.7
HMG20B-215ENST00000585741 TKFCQ3LXA3 575 aa19.42■□□□□ 0.7
HMG20B-215ENST00000585741 GALNT17Q6IS24 598 aa19.42■□□□□ 0.7
HMG20B-215ENST00000585741 RGS22Q8NE09 1264 aa19.42■□□□□ 0.7
HMG20B-215ENST00000585741 HOMER2Q9NSB8 354 aa19.42■□□□□ 0.7
HMG20B-215ENST00000585741 CHMP5Q9NZZ3 219 aa19.42■□□□□ 0.7
HMG20B-215ENST00000585741 KCNJ14Q9UNX9 436 aa19.42■□□□□ 0.7
HMG20B-215ENST00000585741 ATP2A1O14983 1001 aa19.41■□□□□ 0.7
HMG20B-215ENST00000585741 PPP1R11O60927 126 aaPredicted RBP19.41■□□□□ 0.7
HMG20B-215ENST00000585741 GNRH1P01148 92 aa19.41■□□□□ 0.7
HMG20B-215ENST00000585741 KRT2P35908 639 aa19.41■□□□□ 0.7
HMG20B-215ENST00000585741 TMEM132BQ14DG7 1078 aa19.41■□□□□ 0.7
HMG20B-215ENST00000585741 MCF2L2Q86YR7 1114 aa19.41■□□□□ 0.7
HMG20B-215ENST00000585741 TRERF1Q96PN7 1200 aa19.41■□□□□ 0.7
HMG20B-215ENST00000585741 PSTPIP2Q9H939 334 aa19.41■□□□□ 0.7
HMG20B-215ENST00000585741 CPA4Q9UI42 421 aa19.41■□□□□ 0.7
HMG20B-215ENST00000585741 MYH6P13533 1939 aa19.41■□□□□ 0.7
HMG20B-215ENST00000585741 SLC25A27O95847 323 aa19.4■□□□□ 0.7
HMG20B-215ENST00000585741 MYCP01106 439 aaPredicted RBP19.4■□□□□ 0.7
HMG20B-215ENST00000585741 MMP1P03956 469 aa19.4■□□□□ 0.7
HMG20B-215ENST00000585741 WDR78Q5VTH9 848 aa19.4■□□□□ 0.7
HMG20B-215ENST00000585741 FOXD4L5Q5VV16 416 aaPredicted RBP19.4■□□□□ 0.7
HMG20B-215ENST00000585741 NCAPG2Q86XI2 1143 aa19.4■□□□□ 0.7
HMG20B-215ENST00000585741 ANKRD13CQ8N6S4 541 aa19.4■□□□□ 0.7
HMG20B-215ENST00000585741 GPRC5AQ8NFJ5 357 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms