RNA–Protein interactions for RNA: ENST00000585388.1

LSM12-202, Transcript of LSM12 homolog, humanhuman

TSL 3 BASIC

Gene LSM12, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-202ENST00000585388 CYP39A1Q9NYL5 469 aa19.32■□□□□ 0.68
LSM12-202ENST00000585388 TBX21Q9UL17 535 aa19.32■□□□□ 0.68
LSM12-202ENST00000585388 LAMA4Q16363 1823 aa19.32■□□□□ 0.68
LSM12-202ENST00000585388 TRIM6-TRIM34B2RNG4 842 aa19.31■□□□□ 0.68
LSM12-202ENST00000585388 TLR3O15455 904 aaKnown RBP19.31■□□□□ 0.68
LSM12-202ENST00000585388 HSPD1P10809 573 aaKnown RBP19.31■□□□□ 0.68
LSM12-202ENST00000585388 CDK7P50613 346 aa19.31■□□□□ 0.68
LSM12-202ENST00000585388 IRX5P78411 483 aaPredicted RBP19.31■□□□□ 0.68
LSM12-202ENST00000585388 MUM1L1Q5H9M0 696 aa19.31■□□□□ 0.68
LSM12-202ENST00000585388 NSMFQ6X4W1 530 aa19.31■□□□□ 0.68
LSM12-202ENST00000585388 TLK2Q86UE8 772 aa19.31■□□□□ 0.68
LSM12-202ENST00000585388 LNPKQ9C0E8 428 aa19.31■□□□□ 0.68
LSM12-202ENST00000585388 RANBP17Q9H2T7 1088 aaKnown RBP19.31■□□□□ 0.68
LSM12-202ENST00000585388 TCP11L1Q9NUJ3 509 aa19.31■□□□□ 0.68
LSM12-202ENST00000585388 TMEM265A0A087WTH1 108 aa19.3■□□□□ 0.68
LSM12-202ENST00000585388 ARVCFO00192 962 aa19.3■□□□□ 0.68
LSM12-202ENST00000585388 TIMP1P01033 207 aa19.3■□□□□ 0.68
LSM12-202ENST00000585388 EPHB4P54760 987 aa19.3■□□□□ 0.68
LSM12-202ENST00000585388 SNAP25P60880 206 aa19.3■□□□□ 0.68
LSM12-202ENST00000585388 NMIQ13287 307 aaPredicted RBP19.3■□□□□ 0.68
LSM12-202ENST00000585388 SYDE2Q5VT97 1194 aa19.3■□□□□ 0.68
LSM12-202ENST00000585388 BTNL9Q6UXG8 535 aa19.3■□□□□ 0.68
LSM12-202ENST00000585388 TMEM47Q9BQJ4 181 aa19.3■□□□□ 0.68
LSM12-202ENST00000585388 AP5M1Q9H0R1 490 aa19.3■□□□□ 0.68
LSM12-202ENST00000585388 PNMA2Q9UL42 364 aa19.3■□□□□ 0.68
LSM12-202ENST00000585388 ASTN1O14525 1302 aa19.29■□□□□ 0.68
LSM12-202ENST00000585388 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.29■□□□□ 0.68
LSM12-202ENST00000585388 CABYRO75952 493 aa19.29■□□□□ 0.68
LSM12-202ENST00000585388 MFSD5Q6N075 450 aa19.29■□□□□ 0.68
LSM12-202ENST00000585388 ZNF589Q86UQ0 364 aaPredicted RBP19.29■□□□□ 0.68
LSM12-202ENST00000585388 RILPL2Q969X0 211 aa19.29■□□□□ 0.68
LSM12-202ENST00000585388 RNF41Q9H4P4 317 aaPredicted RBP19.29■□□□□ 0.68
LSM12-202ENST00000585388 VTA1Q9NP79 307 aa19.29■□□□□ 0.68
LSM12-202ENST00000585388 ADD3Q9UEY8 706 aaKnown RBP19.29■□□□□ 0.68
LSM12-202ENST00000585388 A0A0C4DFX4 3053 aa19.28■□□□□ 0.68
LSM12-202ENST00000585388 LOC102724159A0A0B4J2E5 919 aa19.28■□□□□ 0.68
LSM12-202ENST00000585388 CTAGE5O15320 804 aa19.28■□□□□ 0.68
LSM12-202ENST00000585388 ZEB2O60315 1214 aa19.28■□□□□ 0.68
LSM12-202ENST00000585388 SLC16A2P36021 539 aa19.28■□□□□ 0.68
LSM12-202ENST00000585388 HAND2P61296 217 aa19.28■□□□□ 0.68
LSM12-202ENST00000585388 PPIGQ13427 754 aaKnown RBP eCLIP19.28■□□□□ 0.68
LSM12-202ENST00000585388 PWP2Q15269 919 aaKnown RBP19.28■□□□□ 0.68
LSM12-202ENST00000585388 FBXO16Q8IX29 292 aaPredicted RBP19.28■□□□□ 0.68
LSM12-202ENST00000585388 FAM126BQ8IXS8 530 aa19.28■□□□□ 0.68
LSM12-202ENST00000585388 SMC5Q8IY18 1101 aa19.28■□□□□ 0.68
LSM12-202ENST00000585388 CDX2Q99626 313 aaPredicted RBP19.28■□□□□ 0.68
LSM12-202ENST00000585388 SEMA6BQ9H3T3 888 aa19.28■□□□□ 0.68
LSM12-202ENST00000585388 RWDD1Q9H446 243 aaPredicted RBP19.28■□□□□ 0.68
LSM12-202ENST00000585388 GNEQ9Y223 722 aaKnown RBP19.28■□□□□ 0.68
LSM12-202ENST00000585388 FRMPD2Q68DX3 1309 aaPredicted RBP19.27■□□□□ 0.68
LSM12-202ENST00000585388 NT5C2P49902 561 aa19.27■□□□□ 0.68
LSM12-202ENST00000585388 BEX3Q00994 111 aa19.27■□□□□ 0.68
LSM12-202ENST00000585388 FSCN1Q16658 493 aaKnown RBP19.27■□□□□ 0.68
LSM12-202ENST00000585388 AKNAD1Q5T1N1 836 aa19.27■□□□□ 0.68
LSM12-202ENST00000585388 IQSEC1Q6DN90 963 aa19.27■□□□□ 0.68
LSM12-202ENST00000585388 TTBK2Q6IQ55 1244 aa19.27■□□□□ 0.68
LSM12-202ENST00000585388 MFSD6Q6ZSS7 791 aa19.27■□□□□ 0.68
LSM12-202ENST00000585388 TMEM199Q8N511 208 aa19.27■□□□□ 0.68
LSM12-202ENST00000585388 MORC4Q8TE76 937 aa19.27■□□□□ 0.68
LSM12-202ENST00000585388 TTC14Q96N46 770 aa19.27■□□□□ 0.68
LSM12-202ENST00000585388 SEZ6LQ9BYH1 1024 aa19.27■□□□□ 0.68
LSM12-202ENST00000585388 GPCPD1Q9NPB8 672 aa19.27■□□□□ 0.68
LSM12-202ENST00000585388 Q9Y3F1 56 aa19.27■□□□□ 0.68
LSM12-202ENST00000585388 UNC80Q8N2C7 3258 aa19.26■□□□□ 0.67
LSM12-202ENST00000585388 PDHBP11177 359 aa19.26■□□□□ 0.67
LSM12-202ENST00000585388 CXCL17Q6UXB2 119 aa19.26■□□□□ 0.67
LSM12-202ENST00000585388 EEPD1Q7L9B9 569 aa19.26■□□□□ 0.67
LSM12-202ENST00000585388 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.26■□□□□ 0.67
LSM12-202ENST00000585388 TTYH1Q9H313 450 aaPredicted RBP19.26■□□□□ 0.67
LSM12-202ENST00000585388 WDR19Q8NEZ3 1342 aa19.25■□□□□ 0.67
LSM12-202ENST00000585388 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.25■□□□□ 0.67
LSM12-202ENST00000585388 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.25■□□□□ 0.67
LSM12-202ENST00000585388 NFIBO00712 420 aa19.25■□□□□ 0.67
LSM12-202ENST00000585388 SMPD1P17405 629 aa19.25■□□□□ 0.67
LSM12-202ENST00000585388 ALDH5A1P51649 535 aaPredicted RBP19.25■□□□□ 0.67
LSM12-202ENST00000585388 ZNF543Q08ER8 600 aa19.25■□□□□ 0.67
LSM12-202ENST00000585388 BAATQ14032 418 aaPredicted RBP19.25■□□□□ 0.67
LSM12-202ENST00000585388 TAPT1Q6NXT6 567 aa19.25■□□□□ 0.67
LSM12-202ENST00000585388 PSRC1Q6PGN9 363 aaPredicted RBP19.25■□□□□ 0.67
LSM12-202ENST00000585388 CHD1LQ86WJ1 897 aa19.25■□□□□ 0.67
LSM12-202ENST00000585388 TBC1D10CQ8IV04 446 aa19.25■□□□□ 0.67
LSM12-202ENST00000585388 SLC43A3Q8NBI5 491 aa19.25■□□□□ 0.67
LSM12-202ENST00000585388 ESR2Q92731 530 aa19.25■□□□□ 0.67
LSM12-202ENST00000585388 MPHOSPH6Q99547 160 aaKnown RBP19.25■□□□□ 0.67
LSM12-202ENST00000585388 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.25■□□□□ 0.679e-7■□□□□ 10.7
LSM12-202ENST00000585388 PPP1R12CQ9BZL4 782 aa19.25■□□□□ 0.67
LSM12-202ENST00000585388 PTPDC1A2A3K4 754 aa19.24■□□□□ 0.67
LSM12-202ENST00000585388 DYNC1LI2O43237 492 aaPredicted RBP19.24■□□□□ 0.67
LSM12-202ENST00000585388 CD4P01730 458 aa19.24■□□□□ 0.67
LSM12-202ENST00000585388 SNHG28P0DPA3 235 aa19.24■□□□□ 0.67
LSM12-202ENST00000585388 SDSP20132 328 aa19.24■□□□□ 0.67
LSM12-202ENST00000585388 DNAJB2P25686 324 aa19.24■□□□□ 0.67
LSM12-202ENST00000585388 GPATCH4Q5T3I0 446 aaKnown RBP19.24■□□□□ 0.67
LSM12-202ENST00000585388 B4GALNT3Q6L9W6 998 aa19.24■□□□□ 0.67
LSM12-202ENST00000585388 OSBPL3Q9H4L5 887 aa19.24■□□□□ 0.67
LSM12-202ENST00000585388 PDGFCQ9NRA1 345 aa19.24■□□□□ 0.67
LSM12-202ENST00000585388 DIAPH3Q9NSV4 1193 aa19.24■□□□□ 0.67
LSM12-202ENST00000585388 DDX49Q9Y6V7 483 aaKnown RBP19.24■□□□□ 0.67
LSM12-202ENST00000585388 HIP1O00291 1037 aa19.23■□□□□ 0.67
LSM12-202ENST00000585388 ZNF213O14771 459 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms