RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 MCF2L2Q86YR7 1114 aa16.85■□□□□ 0.29
SCAMP4-209ENST00000585335 ABRAQ8N0Z2 381 aa16.85■□□□□ 0.29
SCAMP4-209ENST00000585335 ZNF713Q8N859 430 aaPredicted RBP16.85■□□□□ 0.29
SCAMP4-209ENST00000585335 MMP19Q99542 508 aa16.85■□□□□ 0.29
SCAMP4-209ENST00000585335 SLC5A4Q9NY91 659 aa16.85■□□□□ 0.29
SCAMP4-209ENST00000585335 MYH6P13533 1939 aa16.84■□□□□ 0.29
SCAMP4-209ENST00000585335 SLC15A5A6NIM6 579 aa16.84■□□□□ 0.29
SCAMP4-209ENST00000585335 PRMT2P55345 433 aa16.84■□□□□ 0.29
SCAMP4-209ENST00000585335 NTRK3Q16288 839 aa16.84■□□□□ 0.29
SCAMP4-209ENST00000585335 HEATR3Q7Z4Q2 680 aa16.84■□□□□ 0.29
SCAMP4-209ENST00000585335 CCDC83Q8IWF9 413 aa16.84■□□□□ 0.29
SCAMP4-209ENST00000585335 HSCBQ8IWL3 235 aa16.84■□□□□ 0.29
SCAMP4-209ENST00000585335 ANKRD35Q8N283 1001 aa16.84■□□□□ 0.29
SCAMP4-209ENST00000585335 CCDC12Q8WUD4 166 aaPredicted RBP16.84■□□□□ 0.29
SCAMP4-209ENST00000585335 WASF1Q92558 559 aa16.84■□□□□ 0.29
SCAMP4-209ENST00000585335 PHKBQ93100 1093 aa16.84■□□□□ 0.29
SCAMP4-209ENST00000585335 TRIM47Q96LD4 638 aa16.84■□□□□ 0.29
SCAMP4-209ENST00000585335 MAF1Q9H063 256 aa16.84■□□□□ 0.29
SCAMP4-209ENST00000585335 PRDM10Q9NQV6 1147 aa16.84■□□□□ 0.29
SCAMP4-209ENST00000585335 RIPK3Q9Y572 518 aa16.84■□□□□ 0.29
SCAMP4-209ENST00000585335 PFASO15067 1338 aa16.84■□□□□ 0.29
SCAMP4-209ENST00000585335 hCG_1642624A0A1W2PR95 340 aa16.83■□□□□ 0.28
SCAMP4-209ENST00000585335 DEXIO95424 95 aa16.83■□□□□ 0.28
SCAMP4-209ENST00000585335 SCG2P13521 617 aa16.83■□□□□ 0.28
SCAMP4-209ENST00000585335 PTPREP23469 700 aa16.83■□□□□ 0.28
SCAMP4-209ENST00000585335 PFKFB3Q16875 520 aaPredicted RBP16.83■□□□□ 0.28
SCAMP4-209ENST00000585335 PPP1R18Q6NYC8 613 aa16.83■□□□□ 0.28
SCAMP4-209ENST00000585335 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.83■□□□□ 0.28
SCAMP4-209ENST00000585335 DDX11Q96FC9 970 aa16.83■□□□□ 0.28
SCAMP4-209ENST00000585335 TMX3Q96JJ7 454 aa16.83■□□□□ 0.28
SCAMP4-209ENST00000585335 NUDT12Q9BQG2 462 aa16.83■□□□□ 0.28
SCAMP4-209ENST00000585335 LLPHQ9BRT6 129 aaKnown RBP16.83■□□□□ 0.28
SCAMP4-209ENST00000585335 ARHGAP39Q9C0H5 1083 aa16.83■□□□□ 0.28
SCAMP4-209ENST00000585335 STK36Q9NRP7 1315 aa16.83■□□□□ 0.28
SCAMP4-209ENST00000585335 MGAMO43451 1857 aa16.82■□□□□ 0.28
SCAMP4-209ENST00000585335 PPP1R11O60927 126 aaPredicted RBP16.82■□□□□ 0.28
SCAMP4-209ENST00000585335 XBP1P17861 261 aa16.82■□□□□ 0.28
SCAMP4-209ENST00000585335 GRB14Q14449 540 aa16.82■□□□□ 0.28
SCAMP4-209ENST00000585335 NSMFQ6X4W1 530 aa16.82■□□□□ 0.28
SCAMP4-209ENST00000585335 RGS22Q8NE09 1264 aa16.82■□□□□ 0.28
SCAMP4-209ENST00000585335 SNX21Q969T3 373 aa16.82■□□□□ 0.28
SCAMP4-209ENST00000585335 KIF3AQ9Y496 699 aa16.82■□□□□ 0.28
SCAMP4-209ENST00000585335 TRIM17Q9Y577 477 aa16.82■□□□□ 0.28
SCAMP4-209ENST00000585335 BAZ2BQ9UIF8 2168 aaKnown RBP16.82■□□□□ 0.28
SCAMP4-209ENST00000585335 PTPDC1A2A3K4 754 aa16.81■□□□□ 0.28
SCAMP4-209ENST00000585335 CD2BP2O95400 341 aaKnown RBP16.81■□□□□ 0.28
SCAMP4-209ENST00000585335 RGS2P41220 211 aa16.81■□□□□ 0.28
SCAMP4-209ENST00000585335 NAPAP54920 295 aa16.81■□□□□ 0.28
SCAMP4-209ENST00000585335 HMGN5P82970 282 aaKnown RBP16.81■□□□□ 0.28
SCAMP4-209ENST00000585335 MUM1L1Q5H9M0 696 aa16.81■□□□□ 0.28
SCAMP4-209ENST00000585335 CTU1Q7Z7A3 348 aaKnown RBP16.81■□□□□ 0.28
SCAMP4-209ENST00000585335 DPP9Q86TI2 863 aa16.81■□□□□ 0.28
SCAMP4-209ENST00000585335 SAMD3Q8N6K7 520 aa16.81■□□□□ 0.28
SCAMP4-209ENST00000585335 CCDC148Q8NFR7 591 aa16.81■□□□□ 0.28
SCAMP4-209ENST00000585335 CUL5Q93034 780 aa16.81■□□□□ 0.28
SCAMP4-209ENST00000585335 GLT8D2Q9H1C3 349 aa16.81■□□□□ 0.28
SCAMP4-209ENST00000585335 BARHL2Q9NY43 387 aa16.81■□□□□ 0.28
SCAMP4-209ENST00000585335 ORC3Q9UBD5 711 aaPredicted RBP16.81■□□□□ 0.28
SCAMP4-209ENST00000585335 SRRDQ9UH36 339 aa16.81■□□□□ 0.28
SCAMP4-209ENST00000585335 PLXNB2O15031 1838 aa16.8■□□□□ 0.28
SCAMP4-209ENST00000585335 K7ELQ4 463 aaPredicted RBP16.8■□□□□ 0.28
SCAMP4-209ENST00000585335 ADORA2AP29274 412 aa16.8■□□□□ 0.28
SCAMP4-209ENST00000585335 CTGFP29279 349 aa16.8■□□□□ 0.28
SCAMP4-209ENST00000585335 MAP2K5Q13163 448 aa16.8■□□□□ 0.28
SCAMP4-209ENST00000585335 MORN1Q5T089 497 aa16.8■□□□□ 0.28
SCAMP4-209ENST00000585335 WWC2Q6AWC2 1192 aa16.8■□□□□ 0.28
SCAMP4-209ENST00000585335 RNF207Q6ZRF8 634 aa16.8■□□□□ 0.28
SCAMP4-209ENST00000585335 OTOP1Q7RTM1 612 aa16.8■□□□□ 0.28
SCAMP4-209ENST00000585335 TEX2Q8IWB9 1127 aa16.8■□□□□ 0.28
SCAMP4-209ENST00000585335 FAM177A1Q8N128 213 aaPredicted RBP16.8■□□□□ 0.28
SCAMP4-209ENST00000585335 NSUN7Q8NE18 718 aaKnown RBP16.8■□□□□ 0.28
SCAMP4-209ENST00000585335 RAET1EQ8TD07 263 aa16.8■□□□□ 0.28
SCAMP4-209ENST00000585335 CLEC4DQ8WXI8 215 aa16.8■□□□□ 0.28
SCAMP4-209ENST00000585335 GPKOWQ92917 476 aaPredicted RBP eCLIP16.8■□□□□ 0.28
SCAMP4-209ENST00000585335 A1CFQ9NQ94 594 aaKnown RBP16.8■□□□□ 0.28
SCAMP4-209ENST00000585335 MAP3K20Q9NYL2 800 aaKnown RBP16.8■□□□□ 0.28
SCAMP4-209ENST00000585335 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.8■□□□□ 0.28
SCAMP4-209ENST00000585335 ZNF236Q9UL36 1845 aa16.8■□□□□ 0.28
SCAMP4-209ENST00000585335 POTEB2H3BUK9 544 aa16.79■□□□□ 0.28
SCAMP4-209ENST00000585335 NFIBO00712 420 aa16.79■□□□□ 0.28
SCAMP4-209ENST00000585335 PPFIA3O75145 1194 aa16.79■□□□□ 0.28
SCAMP4-209ENST00000585335 TAL1P17542 331 aaPredicted RBP16.79■□□□□ 0.28
SCAMP4-209ENST00000585335 PRKCZQ05513 592 aa16.79■□□□□ 0.28
SCAMP4-209ENST00000585335 PKN2Q16513 984 aaKnown RBP16.79■□□□□ 0.28
SCAMP4-209ENST00000585335 TRMT44Q8IYL2 757 aaKnown RBP16.79■□□□□ 0.28
SCAMP4-209ENST00000585335 FAM184AQ8NB25 1140 aa16.79■□□□□ 0.28
SCAMP4-209ENST00000585335 APBA2Q99767 749 aa16.79■□□□□ 0.28
SCAMP4-209ENST00000585335 SH3GLB2Q9NR46 395 aa16.79■□□□□ 0.28
SCAMP4-209ENST00000585335 CASP8AP2Q9UKL3 1982 aa16.78■□□□□ 0.28
SCAMP4-209ENST00000585335 PCNTO95613 3336 aa16.78■□□□□ 0.28
SCAMP4-209ENST00000585335 GCOM1H8Y6P7 765 aaPredicted RBP16.78■□□□□ 0.28
SCAMP4-209ENST00000585335 STXBP3O00186 592 aa16.78■□□□□ 0.28
SCAMP4-209ENST00000585335 CTDNEP1O95476 244 aa16.78■□□□□ 0.28
SCAMP4-209ENST00000585335 CFBP00751 764 aa16.78■□□□□ 0.28
SCAMP4-209ENST00000585335 POLR2MP0CAP2 368 aa16.78■□□□□ 0.28
SCAMP4-209ENST00000585335 FLT3LGP49771 235 aa16.78■□□□□ 0.28
SCAMP4-209ENST00000585335 ADCY7P51828 1080 aa16.78■□□□□ 0.28
SCAMP4-209ENST00000585335 MRPL12P52815 198 aaKnown RBP16.78■□□□□ 0.28
SCAMP4-209ENST00000585335 IRF5Q13568 498 aa16.78■□□□□ 0.28
SCAMP4-209ENST00000585335 TRIM29Q14134 588 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms