RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 CSGALNACT2Q8N6G5 542 aa15.9■□□□□ 0.14
CDK5RAP3-237ENST00000585163 RETREG2Q8NC44 543 aa15.9■□□□□ 0.14
CDK5RAP3-237ENST00000585163 NUP58Q9BVL2 599 aa15.9■□□□□ 0.14
CDK5RAP3-237ENST00000585163 EXOC1Q9NV70 894 aa15.9■□□□□ 0.14
CDK5RAP3-237ENST00000585163 SPATA31A5Q5VU36 1347 aa15.9■□□□□ 0.14
CDK5RAP3-237ENST00000585163 SPATA31A7Q8IWB4 1347 aa15.9■□□□□ 0.14
CDK5RAP3-237ENST00000585163 CNTNAP4Q9C0A0 1308 aa15.9■□□□□ 0.14
CDK5RAP3-237ENST00000585163 MYH1P12882 1939 aa15.9■□□□□ 0.14
CDK5RAP3-237ENST00000585163 CASP8Q14790 479 aa15.9■□□□□ 0.14
CDK5RAP3-237ENST00000585163 CCDC122Q5T0U0 273 aa15.9■□□□□ 0.14
CDK5RAP3-237ENST00000585163 PAPD7Q5XG87 772 aaKnown RBP15.9■□□□□ 0.14
CDK5RAP3-237ENST00000585163 SH3RF3Q8TEJ3 882 aaPredicted RBP15.9■□□□□ 0.14
CDK5RAP3-237ENST00000585163 SETDB2Q96T68 719 aa15.9■□□□□ 0.14
CDK5RAP3-237ENST00000585163 ZMYND12Q9H0C1 365 aa15.9■□□□□ 0.14
CDK5RAP3-237ENST00000585163 PLCG1P19174 1290 aa15.89■□□□□ 0.13
CDK5RAP3-237ENST00000585163 CCNE1P24864 410 aa15.89■□□□□ 0.13
CDK5RAP3-237ENST00000585163 CABP7Q86V35 215 aa15.89■□□□□ 0.13
CDK5RAP3-237ENST00000585163 NBPF5PQ86XG9 351 aaPredicted RBP15.89■□□□□ 0.13
CDK5RAP3-237ENST00000585163 EHBP1Q8NDI1 1231 aa15.89■□□□□ 0.13
CDK5RAP3-237ENST00000585163 P2RX5Q93086 422 aa15.89■□□□□ 0.13
CDK5RAP3-237ENST00000585163 TMEM47Q9BQJ4 181 aa15.89■□□□□ 0.13
CDK5RAP3-237ENST00000585163 LZTS2Q9BRK4 669 aa15.89■□□□□ 0.13
CDK5RAP3-237ENST00000585163 TRIM9Q9C026 710 aa15.89■□□□□ 0.13
CDK5RAP3-237ENST00000585163 AGPAT5Q9NUQ2 364 aa15.89■□□□□ 0.13
CDK5RAP3-237ENST00000585163 SAR1BQ9Y6B6 198 aa15.89■□□□□ 0.13
CDK5RAP3-237ENST00000585163 BICDL2A1A5D9 508 aa15.89■□□□□ 0.13
CDK5RAP3-237ENST00000585163 RASSF10A6NK89 507 aa15.89■□□□□ 0.13
CDK5RAP3-237ENST00000585163 ENC1O14682 589 aa15.89■□□□□ 0.13
CDK5RAP3-237ENST00000585163 LDHBP07195 334 aaKnown RBP15.89■□□□□ 0.13
CDK5RAP3-237ENST00000585163 TRIM21P19474 475 aaKnown RBP15.89■□□□□ 0.13
CDK5RAP3-237ENST00000585163 KCNQ4P56696 695 aa15.89■□□□□ 0.13
CDK5RAP3-237ENST00000585163 TXNRD1Q16881 649 aa15.89■□□□□ 0.13
CDK5RAP3-237ENST00000585163 BARGINQ6ZT62 677 aa15.89■□□□□ 0.13
CDK5RAP3-237ENST00000585163 ZNF444Q8N0Y2 327 aaPredicted RBP15.89■□□□□ 0.13
CDK5RAP3-237ENST00000585163 HDAC6Q9UBN7 1215 aa15.89■□□□□ 0.13
CDK5RAP3-237ENST00000585163 NARFQ9UHQ1 456 aa15.89■□□□□ 0.13
CDK5RAP3-237ENST00000585163 KRT86O43790 486 aa15.88■□□□□ 0.13
CDK5RAP3-237ENST00000585163 ATP1A1P05023 1023 aaKnown RBP15.88■□□□□ 0.13
CDK5RAP3-237ENST00000585163 OR52Z1P0C646 297 aa15.88■□□□□ 0.13
CDK5RAP3-237ENST00000585163 TM4SF1P30408 202 aa15.88■□□□□ 0.13
CDK5RAP3-237ENST00000585163 SMIM5Q71RC9 77 aa15.88■□□□□ 0.13
CDK5RAP3-237ENST00000585163 AMOTL1Q8IY63 956 aa15.88■□□□□ 0.13
CDK5RAP3-237ENST00000585163 CCDC170Q8IYT3 715 aa15.88■□□□□ 0.13
CDK5RAP3-237ENST00000585163 WDR66Q8TBY9 1149 aa15.88■□□□□ 0.13
CDK5RAP3-237ENST00000585163 C7orf25Q9BPX7 421 aa15.88■□□□□ 0.13
CDK5RAP3-237ENST00000585163 STX8Q9UNK0 236 aa15.88■□□□□ 0.13
CDK5RAP3-237ENST00000585163 TFR2Q9UP52 801 aa15.88■□□□□ 0.13
CDK5RAP3-237ENST00000585163 COL24A1Q17RW2 1714 aa15.88■□□□□ 0.13
CDK5RAP3-237ENST00000585163 CYLC1P35663 651 aaPredicted RBP15.88■□□□□ 0.13
CDK5RAP3-237ENST00000585163 ZBED6P86452 979 aa15.88■□□□□ 0.13
CDK5RAP3-237ENST00000585163 PDE4DQ08499 809 aa15.88■□□□□ 0.13
CDK5RAP3-237ENST00000585163 TBC1D8BQ0IIM8 1120 aa15.88■□□□□ 0.13
CDK5RAP3-237ENST00000585163 ANKRD40Q6AI12 368 aa15.88■□□□□ 0.13
CDK5RAP3-237ENST00000585163 KRT25Q7Z3Z0 450 aa15.88■□□□□ 0.13
CDK5RAP3-237ENST00000585163 FAM114A1Q8IWE2 563 aa15.88■□□□□ 0.13
CDK5RAP3-237ENST00000585163 CCDC47Q96A33 483 aaKnown RBP15.88■□□□□ 0.13
CDK5RAP3-237ENST00000585163 SPZ1Q9BXG8 430 aa15.88■□□□□ 0.13
CDK5RAP3-237ENST00000585163 ZNHIT6Q9NWK9 470 aaKnown RBP15.88■□□□□ 0.13
CDK5RAP3-237ENST00000585163 VPS18Q9P253 973 aa15.88■□□□□ 0.13
CDK5RAP3-237ENST00000585163 EIF3CLB5ME19 914 aaKnown RBP15.87■□□□□ 0.13
CDK5RAP3-237ENST00000585163 KLRF2D3W0D1 207 aa15.87■□□□□ 0.13
CDK5RAP3-237ENST00000585163 N4BP1O75113 896 aaKnown RBP15.87■□□□□ 0.13
CDK5RAP3-237ENST00000585163 PPP1R2P41236 205 aa15.87■□□□□ 0.13
CDK5RAP3-237ENST00000585163 USP14P54578 494 aa15.87■□□□□ 0.13
CDK5RAP3-237ENST00000585163 PPP4CP60510 307 aa15.87■□□□□ 0.13
CDK5RAP3-237ENST00000585163 STK4Q13043 487 aa15.87■□□□□ 0.13
CDK5RAP3-237ENST00000585163 TPTE2Q6XPS3 522 aa15.87■□□□□ 0.13
CDK5RAP3-237ENST00000585163 KIAA1328Q86T90 577 aa15.87■□□□□ 0.13
CDK5RAP3-237ENST00000585163 ZSCAN29Q8IWY8 852 aaPredicted RBP15.87■□□□□ 0.13
CDK5RAP3-237ENST00000585163 SLC44A5Q8NCS7 719 aa15.87■□□□□ 0.13
CDK5RAP3-237ENST00000585163 JAKMIP2Q96AA8 810 aa15.87■□□□□ 0.13
CDK5RAP3-237ENST00000585163 CNOT6LQ96LI5 555 aaKnown RBP15.87■□□□□ 0.13
CDK5RAP3-237ENST00000585163 EIF3CQ99613 913 aaKnown RBP15.87■□□□□ 0.13
CDK5RAP3-237ENST00000585163 NHEJ1Q9H9Q4 299 aaPredicted RBP15.87■□□□□ 0.13
CDK5RAP3-237ENST00000585163 TULP2O00295 520 aa15.87■□□□□ 0.13
CDK5RAP3-237ENST00000585163 BAG3O95817 575 aa15.87■□□□□ 0.13
CDK5RAP3-237ENST00000585163 RASA1P20936 1047 aa15.87■□□□□ 0.13
CDK5RAP3-237ENST00000585163 LMAN1P49257 510 aa15.87■□□□□ 0.13
CDK5RAP3-237ENST00000585163 ZSCAN26Q16670 478 aa15.87■□□□□ 0.13
CDK5RAP3-237ENST00000585163 FIGNQ5HY92 759 aa15.87■□□□□ 0.13
CDK5RAP3-237ENST00000585163 MIIPQ5JXC2 388 aa15.87■□□□□ 0.13
CDK5RAP3-237ENST00000585163 EEF2KMTQ96G04 330 aa15.87■□□□□ 0.13
CDK5RAP3-237ENST00000585163 RPGRIP1Q96KN7 1286 aa15.87■□□□□ 0.13
CDK5RAP3-237ENST00000585163 MMS19Q96T76 1030 aa15.87■□□□□ 0.13
CDK5RAP3-237ENST00000585163 MTMR7Q9Y216 660 aa15.87■□□□□ 0.13
CDK5RAP3-237ENST00000585163 CCNT1O60563 726 aaKnown RBP15.86■□□□□ 0.13
CDK5RAP3-237ENST00000585163 GOLGA8HP0CJ92 632 aa15.86■□□□□ 0.13
CDK5RAP3-237ENST00000585163 KLK7P49862 253 aa15.86■□□□□ 0.13
CDK5RAP3-237ENST00000585163 NAPAP54920 295 aa15.86■□□□□ 0.13
CDK5RAP3-237ENST00000585163 GSTO1P78417 241 aa15.86■□□□□ 0.13
CDK5RAP3-237ENST00000585163 CDK17Q00537 523 aa15.86■□□□□ 0.13
CDK5RAP3-237ENST00000585163 NONOQ15233 471 aaKnown RBP eCLIP15.86■□□□□ 0.13
CDK5RAP3-237ENST00000585163 DIXDC1Q155Q3 683 aa15.86■□□□□ 0.13
CDK5RAP3-237ENST00000585163 LETM2Q2VYF4 491 aa15.86■□□□□ 0.13
CDK5RAP3-237ENST00000585163 COBLL1Q53SF7 1204 aa15.86■□□□□ 0.13
CDK5RAP3-237ENST00000585163 CCDC24Q8N4L8 307 aa15.86■□□□□ 0.13
CDK5RAP3-237ENST00000585163 TGFBRAP1Q8WUH2 860 aa15.86■□□□□ 0.13
CDK5RAP3-237ENST00000585163 ERGIC2Q96RQ1 377 aa15.86■□□□□ 0.13
CDK5RAP3-237ENST00000585163 LACRTQ9GZZ8 138 aa15.86■□□□□ 0.13
CDK5RAP3-237ENST00000585163 SRP68Q9UHB9 627 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms