RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 TMEM179Q6ZVK1 233 aa6.45□□□□□ -1.38
VAPA-207ENST00000583879 RNF180Q86T96 592 aa6.45□□□□□ -1.38
VAPA-207ENST00000583879 ATG4CQ96DT6 458 aa6.45□□□□□ -1.38
VAPA-207ENST00000583879 RNPC3Q96LT9 517 aaKnown RBP6.45□□□□□ -1.38
VAPA-207ENST00000583879 TOX2Q96NM4 488 aa6.45□□□□□ -1.38
VAPA-207ENST00000583879 TINF2Q9BSI4 451 aa6.45□□□□□ -1.38
VAPA-207ENST00000583879 XPNPEP3Q9NQH7 507 aa6.45□□□□□ -1.38
VAPA-207ENST00000583879 MCM9Q9NXL9 1143 aa6.45□□□□□ -1.38
VAPA-207ENST00000583879 ADAMTS5Q9UNA0 930 aa6.45□□□□□ -1.38
VAPA-207ENST00000583879 DIS3Q9Y2L1 958 aaKnown RBP6.45□□□□□ -1.38
VAPA-207ENST00000583879 TMX2Q9Y320 296 aa6.45□□□□□ -1.38
VAPA-207ENST00000583879 WASF2Q9Y6W5 498 aa6.45□□□□□ -1.38
VAPA-207ENST00000583879 VCANP13611 3396 aa6.44□□□□□ -1.38
VAPA-207ENST00000583879 DNAH12Q6ZR08 3092 aa6.44□□□□□ -1.38
VAPA-207ENST00000583879 LAMA2P24043 3122 aaKnown RBP6.44□□□□□ -1.38
VAPA-207ENST00000583879 PQBP1O60828 265 aaKnown RBP6.44□□□□□ -1.38
VAPA-207ENST00000583879 ZNF865P0CJ78 1059 aaPredicted RBP6.44□□□□□ -1.38
VAPA-207ENST00000583879 BMP1P13497 986 aa6.44□□□□□ -1.38
VAPA-207ENST00000583879 FPGSQ05932 587 aa6.44□□□□□ -1.38
VAPA-207ENST00000583879 FAAP100Q0VG06 881 aa6.44□□□□□ -1.38
VAPA-207ENST00000583879 ZNF792Q3KQV3 632 aa6.44□□□□□ -1.38
VAPA-207ENST00000583879 ZKSCAN2Q63HK3 967 aa6.44□□□□□ -1.38
VAPA-207ENST00000583879 ANKRD33Q7Z3H0 272 aa6.44□□□□□ -1.38
VAPA-207ENST00000583879 SPICE1Q8N0Z3 855 aa6.44□□□□□ -1.38
VAPA-207ENST00000583879 NUP133Q8WUM0 1156 aa6.44□□□□□ -1.38
VAPA-207ENST00000583879 CCDC17Q96LX7 622 aa6.44□□□□□ -1.38
VAPA-207ENST00000583879 MMP19Q99542 508 aa6.44□□□□□ -1.38
VAPA-207ENST00000583879 TSEN34Q9BSV6 310 aaKnown RBP6.44□□□□□ -1.38
VAPA-207ENST00000583879 CRNKL1Q9BZJ0 848 aaKnown RBP6.44□□□□□ -1.38
VAPA-207ENST00000583879 ZNF576Q9H609 170 aa6.44□□□□□ -1.38
VAPA-207ENST00000583879 SH2D4AQ9H788 454 aa6.44□□□□□ -1.38
VAPA-207ENST00000583879 C1orf115Q9H7X2 142 aa6.44□□□□□ -1.38
VAPA-207ENST00000583879 VCPKMTQ9H867 229 aa6.44□□□□□ -1.38
VAPA-207ENST00000583879 ARHGEF10LQ9HCE6 1279 aa6.44□□□□□ -1.38
VAPA-207ENST00000583879 DCP1AQ9NPI6 582 aaPredicted RBP6.44□□□□□ -1.38
VAPA-207ENST00000583879 TMEM39AQ9NV64 488 aa6.44□□□□□ -1.38
VAPA-207ENST00000583879 SWAP70Q9UH65 585 aa6.44□□□□□ -1.38
VAPA-207ENST00000583879 EYSQ5T1H1 3165 aa6.44□□□□□ -1.38
VAPA-207ENST00000583879 SIPA1L1O43166 1804 aa6.43□□□□□ -1.38
VAPA-207ENST00000583879 A0A1W2PQ45 241 aaPredicted RBP6.43□□□□□ -1.38
VAPA-207ENST00000583879 A0A1W2PQY0 241 aa6.43□□□□□ -1.38
VAPA-207ENST00000583879 DCDC2CA8MYV0 355 aa6.43□□□□□ -1.38
VAPA-207ENST00000583879 WDR46O15213 610 aaKnown RBP6.43□□□□□ -1.38
VAPA-207ENST00000583879 CAPN5O15484 640 aaPredicted RBP6.43□□□□□ -1.38
VAPA-207ENST00000583879 ADAMTS4O75173 837 aa6.43□□□□□ -1.38
VAPA-207ENST00000583879 TIMP1P01033 207 aa6.43□□□□□ -1.38
VAPA-207ENST00000583879 PGK2P07205 417 aa6.43□□□□□ -1.38
VAPA-207ENST00000583879 CYP2D6P10635 497 aa6.43□□□□□ -1.38
VAPA-207ENST00000583879 AKR1A1P14550 325 aa6.43□□□□□ -1.38
VAPA-207ENST00000583879 AKR1B1P15121 316 aa6.43□□□□□ -1.38
VAPA-207ENST00000583879 PDE6AP16499 860 aa6.43□□□□□ -1.38
VAPA-207ENST00000583879 TAL1P17542 331 aaPredicted RBP6.43□□□□□ -1.38
VAPA-207ENST00000583879 CLCN1P35523 988 aa6.43□□□□□ -1.38
VAPA-207ENST00000583879 STAT3P40763 770 aa6.43□□□□□ -1.38
VAPA-207ENST00000583879 ACLYP53396 1101 aa6.43□□□□□ -1.38
VAPA-207ENST00000583879 KCTD2Q14681 263 aa6.43□□□□□ -1.38
VAPA-207ENST00000583879 AACSQ86V21 672 aa6.43□□□□□ -1.38
VAPA-207ENST00000583879 RIOX2Q8IUF8 465 aa6.43□□□□□ -1.38
VAPA-207ENST00000583879 SLC44A5Q8NCS7 719 aa6.43□□□□□ -1.38
VAPA-207ENST00000583879 EHBP1Q8NDI1 1231 aa6.43□□□□□ -1.38
VAPA-207ENST00000583879 KLHDC9Q8NEP7 349 aa6.43□□□□□ -1.38
VAPA-207ENST00000583879 SDR42E1Q8WUS8 393 aa6.43□□□□□ -1.38
VAPA-207ENST00000583879 DYNLL2Q96FJ2 89 aa6.43□□□□□ -1.38
VAPA-207ENST00000583879 STARD7Q9NQZ5 370 aa6.43□□□□□ -1.38
VAPA-207ENST00000583879 ATP8A2Q9NTI2 1148 aa6.43□□□□□ -1.38
VAPA-207ENST00000583879 ZNF532Q9HCE3 1301 aa6.43□□□□□ -1.38
VAPA-207ENST00000583879 ATAD5Q96QE3 1844 aa6.43□□□□□ -1.38
VAPA-207ENST00000583879 TCRBV5S4A2TA0A5A2 114 aa6.42□□□□□ -1.38
VAPA-207ENST00000583879 MOXD2PA6NHM9 499 aa6.42□□□□□ -1.38
VAPA-207ENST00000583879 VWA5AO00534 786 aa6.42□□□□□ -1.38
VAPA-207ENST00000583879 SNAI1O95863 264 aaPredicted RBP6.42□□□□□ -1.38
VAPA-207ENST00000583879 EEF2P13639 858 aaKnown RBP6.42□□□□□ -1.38
VAPA-207ENST00000583879 JUNDP17535 347 aa6.42□□□□□ -1.38
VAPA-207ENST00000583879 COPB2P35606 906 aa6.42□□□□□ -1.38
VAPA-207ENST00000583879 CDK8P49336 464 aa6.42□□□□□ -1.38
VAPA-207ENST00000583879 CDK7P50613 346 aa6.42□□□□□ -1.38
VAPA-207ENST00000583879 ICA1Q05084 483 aa6.42□□□□□ -1.38
VAPA-207ENST00000583879 KCNA10Q16322 511 aa6.42□□□□□ -1.38
VAPA-207ENST00000583879 C12orf60Q5U649 245 aa6.42□□□□□ -1.38
VAPA-207ENST00000583879 CCSAPQ6IQ19 270 aaPredicted RBP6.42□□□□□ -1.38
VAPA-207ENST00000583879 MFSD5Q6N075 450 aa6.42□□□□□ -1.38
VAPA-207ENST00000583879 MAMDC4Q6UXC1 1216 aa6.42□□□□□ -1.38
VAPA-207ENST00000583879 C16orf59Q7L2K0 433 aa6.42□□□□□ -1.38
VAPA-207ENST00000583879 TRIM46Q7Z4K8 759 aa6.42□□□□□ -1.38
VAPA-207ENST00000583879 ERC1Q8IUD2 1116 aa6.42□□□□□ -1.38
VAPA-207ENST00000583879 CLEC10AQ8IUN9 316 aa6.42□□□□□ -1.38
VAPA-207ENST00000583879 LCORLQ8N3X6 602 aa6.42□□□□□ -1.38
VAPA-207ENST00000583879 MSL3Q8N5Y2 521 aaKnown RBP6.42□□□□□ -1.38
VAPA-207ENST00000583879 USP38Q8NB14 1042 aa6.42□□□□□ -1.38
VAPA-207ENST00000583879 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.42□□□□□ -1.38
VAPA-207ENST00000583879 ATXN2LQ8WWM7 1075 aaKnown RBP6.42□□□□□ -1.38
VAPA-207ENST00000583879 TIFAQ96CG3 184 aa6.42□□□□□ -1.38
VAPA-207ENST00000583879 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.42□□□□□ -1.382e-9■■■■■ 32.7
VAPA-207ENST00000583879 KANSL2Q9H9L4 492 aa6.42□□□□□ -1.38
VAPA-207ENST00000583879 GPCPD1Q9NPB8 672 aa6.42□□□□□ -1.38
VAPA-207ENST00000583879 FBXO28Q9NVF7 368 aa6.42□□□□□ -1.38
VAPA-207ENST00000583879 ZNF214Q9UL59 606 aaPredicted RBP6.42□□□□□ -1.38
VAPA-207ENST00000583879 FAM184BQ9ULE4 1060 aa6.42□□□□□ -1.38
VAPA-207ENST00000583879 PPP1R9AQ9ULJ8 1098 aa6.42□□□□□ -1.38
VAPA-207ENST00000583879 CNPY2Q9Y2B0 182 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms