RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 ITGB8P26012 769 aa10.26□□□□□ -0.77
CDK5RAP3-229ENST00000583697 SNAP25P60880 206 aa10.26□□□□□ -0.77
CDK5RAP3-229ENST00000583697 IRX6P78412 446 aaPredicted RBP10.26□□□□□ -0.77
CDK5RAP3-229ENST00000583697 NMIQ13287 307 aaPredicted RBP10.26□□□□□ -0.77
CDK5RAP3-229ENST00000583697 AAMPQ13685 434 aa10.26□□□□□ -0.77
CDK5RAP3-229ENST00000583697 CCSAPQ6IQ19 270 aaPredicted RBP10.26□□□□□ -0.77
CDK5RAP3-229ENST00000583697 TICAM2Q86XR7 235 aa10.26□□□□□ -0.77
CDK5RAP3-229ENST00000583697 FBXO16Q8IX29 292 aaPredicted RBP10.26□□□□□ -0.77
CDK5RAP3-229ENST00000583697 MPHOSPH6Q99547 160 aaKnown RBP10.26□□□□□ -0.77
CDK5RAP3-229ENST00000583697 PPP1R12CQ9BZL4 782 aa10.26□□□□□ -0.77
CDK5RAP3-229ENST00000583697 KATNBL1Q9H079 304 aa10.26□□□□□ -0.77
CDK5RAP3-229ENST00000583697 AP5M1Q9H0R1 490 aa10.26□□□□□ -0.77
CDK5RAP3-229ENST00000583697 RANBP17Q9H2T7 1088 aaKnown RBP10.26□□□□□ -0.77
CDK5RAP3-229ENST00000583697 RNF41Q9H4P4 317 aaPredicted RBP10.26□□□□□ -0.77
CDK5RAP3-229ENST00000583697 CYP39A1Q9NYL5 469 aa10.26□□□□□ -0.77
CDK5RAP3-229ENST00000583697 ADD3Q9UEY8 706 aaKnown RBP10.26□□□□□ -0.77
CDK5RAP3-229ENST00000583697 TMEM265A0A087WTH1 108 aa10.25□□□□□ -0.77
CDK5RAP3-229ENST00000583697 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-229ENST00000583697 SOWAHBA6NEL2 793 aa10.25□□□□□ -0.77
CDK5RAP3-229ENST00000583697 ARVCFO00192 962 aa10.25□□□□□ -0.77
CDK5RAP3-229ENST00000583697 ZEB2O60315 1214 aa10.25□□□□□ -0.77
CDK5RAP3-229ENST00000583697 FGAP02671 866 aa10.25□□□□□ -0.77
CDK5RAP3-229ENST00000583697 HSPD1P10809 573 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP3-229ENST00000583697 HAND2P61296 217 aa10.25□□□□□ -0.77
CDK5RAP3-229ENST00000583697 IRX5P78411 483 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-229ENST00000583697 ALX1Q15699 326 aa10.25□□□□□ -0.77
CDK5RAP3-229ENST00000583697 MUM1L1Q5H9M0 696 aa10.25□□□□□ -0.77
CDK5RAP3-229ENST00000583697 SYDE2Q5VT97 1194 aa10.25□□□□□ -0.77
CDK5RAP3-229ENST00000583697 EEPD1Q7L9B9 569 aa10.25□□□□□ -0.77
CDK5RAP3-229ENST00000583697 ZNF589Q86UQ0 364 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-229ENST00000583697 TMEM199Q8N511 208 aa10.25□□□□□ -0.77
CDK5RAP3-229ENST00000583697 VTA1Q9NP79 307 aa10.25□□□□□ -0.77
CDK5RAP3-229ENST00000583697 INCENPQ9NQS7 918 aa10.25□□□□□ -0.77
CDK5RAP3-229ENST00000583697 TBX21Q9UL17 535 aa10.25□□□□□ -0.77
CDK5RAP3-229ENST00000583697 PNMA2Q9UL42 364 aa10.25□□□□□ -0.77
CDK5RAP3-229ENST00000583697 CDH23Q9H251 3354 aa10.24□□□□□ -0.77
CDK5RAP3-229ENST00000583697 TANC1Q9C0D5 1861 aa10.24□□□□□ -0.77
CDK5RAP3-229ENST00000583697 PTPDC1A2A3K4 754 aa10.24□□□□□ -0.77
CDK5RAP3-229ENST00000583697 CABYRO75952 493 aa10.24□□□□□ -0.77
CDK5RAP3-229ENST00000583697 TIMP1P01033 207 aa10.24□□□□□ -0.77
CDK5RAP3-229ENST00000583697 FGRP09769 529 aa10.24□□□□□ -0.77
CDK5RAP3-229ENST00000583697 PDHBP11177 359 aa10.24□□□□□ -0.77
CDK5RAP3-229ENST00000583697 FOSL2P15408 326 aa10.24□□□□□ -0.77
CDK5RAP3-229ENST00000583697 SLC16A2P36021 539 aa10.24□□□□□ -0.77
CDK5RAP3-229ENST00000583697 NOVP48745 357 aa10.24□□□□□ -0.77
CDK5RAP3-229ENST00000583697 EPHB4P54760 987 aa10.24□□□□□ -0.77
CDK5RAP3-229ENST00000583697 BEX3Q00994 111 aa10.24□□□□□ -0.77
CDK5RAP3-229ENST00000583697 PPIGQ13427 754 aaKnown RBP eCLIP10.24□□□□□ -0.772e-8■■■■□ 21.4
CDK5RAP3-229ENST00000583697 FSCN1Q16658 493 aaKnown RBP10.24□□□□□ -0.77
CDK5RAP3-229ENST00000583697 AKNAD1Q5T1N1 836 aa10.24□□□□□ -0.77
CDK5RAP3-229ENST00000583697 B4GALNT3Q6L9W6 998 aa10.24□□□□□ -0.77
CDK5RAP3-229ENST00000583697 MFSD5Q6N075 450 aa10.24□□□□□ -0.77
CDK5RAP3-229ENST00000583697 PSRC1Q6PGN9 363 aaPredicted RBP10.24□□□□□ -0.77
CDK5RAP3-229ENST00000583697 CXCL17Q6UXB2 119 aa10.24□□□□□ -0.77
CDK5RAP3-229ENST00000583697 MFSD6Q6ZSS7 791 aa10.24□□□□□ -0.77
CDK5RAP3-229ENST00000583697 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.24□□□□□ -0.77
CDK5RAP3-229ENST00000583697 FAM126BQ8IXS8 530 aa10.24□□□□□ -0.77
CDK5RAP3-229ENST00000583697 ESR2Q92731 530 aa10.24□□□□□ -0.77
CDK5RAP3-229ENST00000583697 TMEM47Q9BQJ4 181 aa10.24□□□□□ -0.77
CDK5RAP3-229ENST00000583697 RWDD1Q9H446 243 aaPredicted RBP10.24□□□□□ -0.77
CDK5RAP3-229ENST00000583697 GPCPD1Q9NPB8 672 aa10.24□□□□□ -0.77
CDK5RAP3-229ENST00000583697 DIAPH3Q9NSV4 1193 aa10.24□□□□□ -0.77
CDK5RAP3-229ENST00000583697 TCP11L1Q9NUJ3 509 aa10.24□□□□□ -0.77
CDK5RAP3-229ENST00000583697 ASTN1O14525 1302 aa10.24□□□□□ -0.77
CDK5RAP3-229ENST00000583697 EYSQ5T1H1 3165 aa10.23□□□□□ -0.77
CDK5RAP3-229ENST00000583697 NFIBO00712 420 aa10.23□□□□□ -0.77
CDK5RAP3-229ENST00000583697 ZNF213O14771 459 aa10.23□□□□□ -0.77
CDK5RAP3-229ENST00000583697 DNAJB2P25686 324 aa10.23□□□□□ -0.77
CDK5RAP3-229ENST00000583697 CALML3P27482 149 aa10.23□□□□□ -0.77
CDK5RAP3-229ENST00000583697 NT5C2P49902 561 aa10.23□□□□□ -0.77
CDK5RAP3-229ENST00000583697 ALDH5A1P51649 535 aaPredicted RBP10.23□□□□□ -0.77
CDK5RAP3-229ENST00000583697 NKX3-2P78367 333 aa10.23□□□□□ -0.77
CDK5RAP3-229ENST00000583697 GPATCH4Q5T3I0 446 aaKnown RBP10.23□□□□□ -0.77
CDK5RAP3-229ENST00000583697 TTBK2Q6IQ55 1244 aa10.23□□□□□ -0.77
CDK5RAP3-229ENST00000583697 SLC30A10Q6XR72 485 aa10.23□□□□□ -0.77
CDK5RAP3-229ENST00000583697 KIAA1211Q6ZU35 1233 aa10.23□□□□□ -0.77
CDK5RAP3-229ENST00000583697 IQCA1Q86XH1 822 aa10.23□□□□□ -0.77
CDK5RAP3-229ENST00000583697 TBC1D10CQ8IV04 446 aa10.23□□□□□ -0.77
CDK5RAP3-229ENST00000583697 MYLIPQ8WY64 445 aa10.23□□□□□ -0.77
CDK5RAP3-229ENST00000583697 CDX2Q99626 313 aaPredicted RBP10.23□□□□□ -0.77
CDK5RAP3-229ENST00000583697 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.23□□□□□ -0.776e-21■□□□□ 11
CDK5RAP3-229ENST00000583697 MTIF3Q9H2K0 278 aaKnown RBP10.23□□□□□ -0.77
CDK5RAP3-229ENST00000583697 GNEQ9Y223 722 aaKnown RBP10.23□□□□□ -0.77
CDK5RAP3-229ENST00000583697 NEDD4P46934 1319 aa10.23□□□□□ -0.77
CDK5RAP3-229ENST00000583697 WDR19Q8NEZ3 1342 aa10.23□□□□□ -0.77
CDK5RAP3-229ENST00000583697 RAD50Q92878 1312 aa10.23□□□□□ -0.77
CDK5RAP3-229ENST00000583697 LAMA2P24043 3122 aaKnown RBP10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 GBF1Q92538 1859 aa10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 LOC102724159A0A0B4J2E5 919 aa10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 HIP1O00291 1037 aa10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 CTAGE5O15320 804 aa10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 DYNC1LI2O43237 492 aaPredicted RBP10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 CSF2RAP15509 400 aa10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 SMPD1P17405 629 aa10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 SDSP20132 328 aa10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 CPT1AP50416 773 aa10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 CDK7P50613 346 aa10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 ZNF543Q08ER8 600 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms