RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 MTX1Q13505 466 aa9.74□□□□□ -0.85
PPP4R1-225ENST00000583438 CCL14Q16627 93 aa9.74□□□□□ -0.85
PPP4R1-225ENST00000583438 FAM110CQ1W6H9 321 aa9.74□□□□□ -0.85
PPP4R1-225ENST00000583438 Q6ZNB5 142 aa9.74□□□□□ -0.85
PPP4R1-225ENST00000583438 DZIP1Q86YF9 867 aaKnown RBP9.74□□□□□ -0.85
PPP4R1-225ENST00000583438 ZSCAN29Q8IWY8 852 aaPredicted RBP9.74□□□□□ -0.85
PPP4R1-225ENST00000583438 C7orf61Q8IZ16 206 aa9.74□□□□□ -0.85
PPP4R1-225ENST00000583438 ZNF295-AS1Q8N0V1 137 aa9.74□□□□□ -0.85
PPP4R1-225ENST00000583438 CXXC1Q9P0U4 656 aaPredicted RBP9.74□□□□□ -0.85
PPP4R1-225ENST00000583438 ZNF236Q9UL36 1845 aa9.74□□□□□ -0.85
PPP4R1-225ENST00000583438 PLXNA1Q9UIW2 1896 aa9.74□□□□□ -0.85
PPP4R1-225ENST00000583438 FIGNL2A6NMB9 653 aa9.73□□□□□ -0.85
PPP4R1-225ENST00000583438 TTLL8A6PVC2 850 aa9.73□□□□□ -0.85
PPP4R1-225ENST00000583438 IGFBP4P22692 258 aa9.73□□□□□ -0.85
PPP4R1-225ENST00000583438 HOXD10P28358 340 aa9.73□□□□□ -0.85
PPP4R1-225ENST00000583438 ARID4AP29374 1257 aaPredicted RBP9.73□□□□□ -0.85
PPP4R1-225ENST00000583438 SCNN1AP37088 669 aa9.73□□□□□ -0.85
PPP4R1-225ENST00000583438 CAP2P40123 477 aa9.73□□□□□ -0.85
PPP4R1-225ENST00000583438 MAP3K21Q5TCX8 1036 aa9.73□□□□□ -0.85
PPP4R1-225ENST00000583438 FASTKD5Q7L8L6 764 aaKnown RBP9.73□□□□□ -0.85
PPP4R1-225ENST00000583438 SMCR8Q8TEV9 937 aaPredicted RBP9.73□□□□□ -0.85
PPP4R1-225ENST00000583438 USP6NLQ92738 828 aa9.73□□□□□ -0.85
PPP4R1-225ENST00000583438 PORCNQ9H237 461 aa9.73□□□□□ -0.85
PPP4R1-225ENST00000583438 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.73□□□□□ -0.85
PPP4R1-225ENST00000583438 MYH7P12883 1935 aa9.73□□□□□ -0.85
PPP4R1-225ENST00000583438 SRGAP3O43295 1099 aa9.72□□□□□ -0.85
PPP4R1-225ENST00000583438 CNMDO75829 334 aa9.72□□□□□ -0.85
PPP4R1-225ENST00000583438 TFRCP02786 760 aaKnown RBP9.72□□□□□ -0.85
PPP4R1-225ENST00000583438 CCND3P30281 292 aaPredicted RBP9.72□□□□□ -0.85
PPP4R1-225ENST00000583438 MAGEA10P43363 369 aaPredicted RBP9.72□□□□□ -0.85
PPP4R1-225ENST00000583438 RARSP54136 660 aaKnown RBP9.72□□□□□ -0.85
PPP4R1-225ENST00000583438 TMEM214Q6NUQ4 689 aaKnown RBP9.72□□□□□ -0.85
PPP4R1-225ENST00000583438 PRICKLE2Q7Z3G6 844 aa9.72□□□□□ -0.85
PPP4R1-225ENST00000583438 SPATA5Q8NB90 893 aa9.72□□□□□ -0.85
PPP4R1-225ENST00000583438 ZNF280CQ8ND82 737 aa9.72□□□□□ -0.85
PPP4R1-225ENST00000583438 P2RX7Q99572 595 aaKnown RBP9.72□□□□□ -0.85
PPP4R1-225ENST00000583438 HTATIP2Q9BUP3 242 aa9.72□□□□□ -0.85
PPP4R1-225ENST00000583438 TLR7Q9NYK1 1049 aaKnown RBP9.72□□□□□ -0.85
PPP4R1-225ENST00000583438 FLRT1Q9NZU1 646 aa9.72□□□□□ -0.85
PPP4R1-225ENST00000583438 MORF4L1Q9UBU8 362 aa9.72□□□□□ -0.85
PPP4R1-225ENST00000583438 GDF11O95390 407 aa9.71□□□□□ -0.86
PPP4R1-225ENST00000583438 HMGCRP04035 888 aa9.71□□□□□ -0.86
PPP4R1-225ENST00000583438 COL6A1P12109 1028 aa9.71□□□□□ -0.86
PPP4R1-225ENST00000583438 TRIM27P14373 513 aa9.71□□□□□ -0.86
PPP4R1-225ENST00000583438 METTL16Q86W50 562 aaKnown RBP9.71□□□□□ -0.86
PPP4R1-225ENST00000583438 ZDHHC1Q8WTX9 485 aa9.71□□□□□ -0.86
PPP4R1-225ENST00000583438 DBNDD2Q9BQY9 259 aa9.71□□□□□ -0.86
PPP4R1-225ENST00000583438 PIH1D3Q9NQM4 214 aaKnown RBP9.71□□□□□ -0.86
PPP4R1-225ENST00000583438 GNL3LQ9NVN8 582 aaKnown RBP9.71□□□□□ -0.86
PPP4R1-225ENST00000583438 RBPJLQ9UBG7 517 aa9.71□□□□□ -0.86
PPP4R1-225ENST00000583438 DNMT3LQ9UJW3 386 aa9.71□□□□□ -0.86
PPP4R1-225ENST00000583438 OGDHLQ9ULD0 1010 aa9.71□□□□□ -0.86
PPP4R1-225ENST00000583438 FLT1P17948 1338 aa9.71□□□□□ -0.86
PPP4R1-225ENST00000583438 GREB1LQ9C091 1923 aaPredicted RBP9.7□□□□□ -0.86
PPP4R1-225ENST00000583438 MCM3APO60318 1980 aa9.7□□□□□ -0.86
PPP4R1-225ENST00000583438 BCAR3O75815 825 aa9.7□□□□□ -0.86
PPP4R1-225ENST00000583438 BRD1O95696 1058 aa9.7□□□□□ -0.86
PPP4R1-225ENST00000583438 CYP2E1P05181 493 aaPredicted RBP9.7□□□□□ -0.86
PPP4R1-225ENST00000583438 CYP2B6P20813 491 aa9.7□□□□□ -0.86
PPP4R1-225ENST00000583438 DYNLL1P63167 89 aaKnown RBP9.7□□□□□ -0.86
PPP4R1-225ENST00000583438 LRRC26Q2I0M4 334 aa9.7□□□□□ -0.86
PPP4R1-225ENST00000583438 C4orf17Q53FE4 359 aa9.7□□□□□ -0.86
PPP4R1-225ENST00000583438 SH3PXD2AQ5TCZ1 1133 aa9.7□□□□□ -0.86
PPP4R1-225ENST00000583438 MAPKAPK5Q8IW41 473 aa9.7□□□□□ -0.86
PPP4R1-225ENST00000583438 TEX11Q8IYF3 940 aa9.7□□□□□ -0.86
PPP4R1-225ENST00000583438 RHBDD1Q8TEB9 315 aa9.7□□□□□ -0.86
PPP4R1-225ENST00000583438 AATFQ9NY61 560 aaKnown RBP eCLIP9.7□□□□□ -0.86
PPP4R1-225ENST00000583438 PALD1Q9ULE6 856 aa9.7□□□□□ -0.86
PPP4R1-225ENST00000583438 GBF1Q92538 1859 aa9.7□□□□□ -0.86
PPP4R1-225ENST00000583438 A0A1W2PPC1 479 aa9.69□□□□□ -0.86
PPP4R1-225ENST00000583438 SOBPA7XYQ1 873 aa9.69□□□□□ -0.86
PPP4R1-225ENST00000583438 SPATA31C2B4DYI2 1134 aa9.69□□□□□ -0.86
PPP4R1-225ENST00000583438 SMIM22K7EJ46 135 aa9.69□□□□□ -0.86
PPP4R1-225ENST00000583438 DLL1O00548 723 aa9.69□□□□□ -0.86
PPP4R1-225ENST00000583438 IGHA2P01877 340 aa9.69□□□□□ -0.86
PPP4R1-225ENST00000583438 BACE1P56817 501 aa9.69□□□□□ -0.86
PPP4R1-225ENST00000583438 HERVK_113P62684 666 aa9.69□□□□□ -0.86
PPP4R1-225ENST00000583438 CACNB2Q08289 660 aaPredicted RBP9.69□□□□□ -0.86
PPP4R1-225ENST00000583438 POU4F2Q12837 409 aa9.69□□□□□ -0.86
PPP4R1-225ENST00000583438 CAPN12Q6ZSI9 719 aa9.69□□□□□ -0.86
PPP4R1-225ENST00000583438 LYSMD3Q7Z3D4 306 aa9.69□□□□□ -0.86
PPP4R1-225ENST00000583438 RPTORQ8N122 1335 aa9.69□□□□□ -0.86
PPP4R1-225ENST00000583438 ZGPATQ8N5A5 531 aaKnown RBP9.69□□□□□ -0.86
PPP4R1-225ENST00000583438 TRPV1Q8NER1 839 aa9.69□□□□□ -0.86
PPP4R1-225ENST00000583438 TGFBRAP1Q8WUH2 860 aa9.69□□□□□ -0.86
PPP4R1-225ENST00000583438 NEUROD6Q96NK8 337 aa9.69□□□□□ -0.86
PPP4R1-225ENST00000583438 WDR18Q9BV38 432 aa9.69□□□□□ -0.86
PPP4R1-225ENST00000583438 GMPR2Q9P2T1 348 aaKnown RBP9.69□□□□□ -0.86
PPP4R1-225ENST00000583438 SAP30BPQ9UHR5 308 aaKnown RBP9.69□□□□□ -0.86
PPP4R1-225ENST00000583438 NR2E3Q9Y5X4 410 aa9.69□□□□□ -0.86
PPP4R1-225ENST00000583438 REV3LO60673 3130 aa9.68□□□□□ -0.86
PPP4R1-225ENST00000583438 RHOQP17081 205 aa9.68□□□□□ -0.86
PPP4R1-225ENST00000583438 HOXA7P31268 230 aaPredicted RBP9.68□□□□□ -0.86
PPP4R1-225ENST00000583438 GUCY1A2P33402 732 aa9.68□□□□□ -0.86
PPP4R1-225ENST00000583438 BMP8BP34820 402 aa9.68□□□□□ -0.86
PPP4R1-225ENST00000583438 NOS2P35228 1153 aa9.68□□□□□ -0.86
PPP4R1-225ENST00000583438 PHKA2P46019 1235 aa9.68□□□□□ -0.86
PPP4R1-225ENST00000583438 PSMA6P60900 246 aaKnown RBP9.68□□□□□ -0.86
PPP4R1-225ENST00000583438 MVPQ14764 893 aaKnown RBP9.68□□□□□ -0.86
PPP4R1-225ENST00000583438 TEAD4Q15561 434 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms