RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 ZNF200P98182 395 aaPredicted RBP7.06□□□□□ -1.28
SMCHD1-208ENST00000583344 PAK2Q13177 524 aa7.06□□□□□ -1.28
SMCHD1-208ENST00000583344 PPP2R5DQ14738 602 aa7.06□□□□□ -1.28
SMCHD1-208ENST00000583344 CYP2R1Q6VVX0 501 aa7.06□□□□□ -1.28
SMCHD1-208ENST00000583344 ADCY4Q8NFM4 1077 aa7.06□□□□□ -1.28
SMCHD1-208ENST00000583344 FEZF2Q8TBJ5 459 aa7.06□□□□□ -1.28
SMCHD1-208ENST00000583344 RELTQ969Z4 430 aa7.06□□□□□ -1.28
SMCHD1-208ENST00000583344 PLA2G2DQ9UNK4 145 aa7.06□□□□□ -1.28
SMCHD1-208ENST00000583344 ADAMTS20P59510 1910 aa7.05□□□□□ -1.28
SMCHD1-208ENST00000583344 DBHP09172 617 aa7.05□□□□□ -1.28
SMCHD1-208ENST00000583344 LIMS1P48059 325 aa7.05□□□□□ -1.28
SMCHD1-208ENST00000583344 MAPKAPK2P49137 400 aa7.05□□□□□ -1.28
SMCHD1-208ENST00000583344 MFAP1P55081 439 aaKnown RBP7.05□□□□□ -1.28
SMCHD1-208ENST00000583344 BICRALQ6AI39 1079 aa7.05□□□□□ -1.28
SMCHD1-208ENST00000583344 ZC3H14Q6PJT7 736 aaKnown RBP7.05□□□□□ -1.28
SMCHD1-208ENST00000583344 PWWP2AQ96N64 755 aa7.05□□□□□ -1.28
SMCHD1-208ENST00000583344 PTCHD1Q96NR3 888 aa7.05□□□□□ -1.28
SMCHD1-208ENST00000583344 KRTAP4-11Q9BYQ6 195 aa7.05□□□□□ -1.28
SMCHD1-208ENST00000583344 XYLT2Q9H1B5 865 aa7.05□□□□□ -1.28
SMCHD1-208ENST00000583344 SF3B6Q9Y3B4 125 aaKnown RBP7.05□□□□□ -1.28
SMCHD1-208ENST00000583344 OTOL1A6NHN0 477 aaPredicted RBP7.04□□□□□ -1.28
SMCHD1-208ENST00000583344 SASH1O94885 1247 aa7.04□□□□□ -1.28
SMCHD1-208ENST00000583344 NOP2P46087 812 aaKnown RBP7.04□□□□□ -1.28
SMCHD1-208ENST00000583344 NR1I3Q14994 352 aa7.04□□□□□ -1.28
SMCHD1-208ENST00000583344 SYT8Q8NBV8 401 aa7.04□□□□□ -1.28
SMCHD1-208ENST00000583344 HAUS7Q99871 368 aa7.04□□□□□ -1.28
SMCHD1-208ENST00000583344 PCDHB10Q9UN67 800 aa7.04□□□□□ -1.28
SMCHD1-208ENST00000583344 EFR3BQ9Y2G0 817 aa7.04□□□□□ -1.28
SMCHD1-208ENST00000583344 A0A1W2PQJ5 194 aa7.03□□□□□ -1.28
SMCHD1-208ENST00000583344 ZBTB7CA1YPR0 619 aa7.03□□□□□ -1.28
SMCHD1-208ENST00000583344 FOXD2O60548 495 aaPredicted RBP7.03□□□□□ -1.28
SMCHD1-208ENST00000583344 NFIXQ14938 502 aa7.03□□□□□ -1.28
SMCHD1-208ENST00000583344 TCEAL1Q15170 157 aa7.03□□□□□ -1.28
SMCHD1-208ENST00000583344 GNPTABQ3T906 1256 aa7.03□□□□□ -1.28
SMCHD1-208ENST00000583344 MCMBPQ9BTE3 642 aa7.03□□□□□ -1.28
SMCHD1-208ENST00000583344 PDLIM7Q9NR12 457 aa7.03□□□□□ -1.28
SMCHD1-208ENST00000583344 RTEL1Q9NZ71 1219 aa7.03□□□□□ -1.28
SMCHD1-208ENST00000583344 SCAMP3O14828 347 aaKnown RBP7.02□□□□□ -1.29
SMCHD1-208ENST00000583344 SRGAP3O43295 1099 aa7.02□□□□□ -1.29
SMCHD1-208ENST00000583344 CYBBP04839 570 aa7.02□□□□□ -1.29
SMCHD1-208ENST00000583344 IGFBP6P24592 240 aaPredicted RBP7.02□□□□□ -1.29
SMCHD1-208ENST00000583344 POU4F1Q01851 419 aa7.02□□□□□ -1.29
SMCHD1-208ENST00000583344 LCE5AQ5TCM9 118 aa7.02□□□□□ -1.29
SMCHD1-208ENST00000583344 PAQR3Q6TCH7 311 aa7.02□□□□□ -1.29
SMCHD1-208ENST00000583344 METTL16Q86W50 562 aaKnown RBP7.02□□□□□ -1.29
SMCHD1-208ENST00000583344 ZNF654Q8IZM8 581 aa7.02□□□□□ -1.29
SMCHD1-208ENST00000583344 ZDHHC14Q8IZN3 488 aa7.02□□□□□ -1.29
SMCHD1-208ENST00000583344 CRBNQ96SW2 442 aa7.02□□□□□ -1.29
SMCHD1-208ENST00000583344 KRTAP9-3Q9BYQ3 159 aa7.02□□□□□ -1.29
SMCHD1-208ENST00000583344 KLHL25Q9H0H3 589 aa7.02□□□□□ -1.29
SMCHD1-208ENST00000583344 WHRNQ9P202 907 aa7.02□□□□□ -1.29
SMCHD1-208ENST00000583344 IRS2Q9Y4H2 1338 aa7.01□□□□□ -1.29
SMCHD1-208ENST00000583344 STXBP3O00186 592 aa7.01□□□□□ -1.29
SMCHD1-208ENST00000583344 FBLN1P23142 703 aa7.01□□□□□ -1.29
SMCHD1-208ENST00000583344 SOX9P48436 509 aa7.01□□□□□ -1.29
SMCHD1-208ENST00000583344 EIF6P56537 245 aaKnown RBP7.01□□□□□ -1.29
SMCHD1-208ENST00000583344 TP53I13Q8NBR0 393 aaPredicted RBP7.01□□□□□ -1.29
SMCHD1-208ENST00000583344 FGD4Q96M96 766 aa7.01□□□□□ -1.29
SMCHD1-208ENST00000583344 RXFP1Q9HBX9 757 aa7.01□□□□□ -1.29
SMCHD1-208ENST00000583344 A0A087WZG4 1122 aa7□□□□□ -1.29
SMCHD1-208ENST00000583344 ZC3H12DA2A288 527 aaKnown RBP7□□□□□ -1.29
SMCHD1-208ENST00000583344 VAMP4O75379 141 aa7□□□□□ -1.29
SMCHD1-208ENST00000583344 TBC1D8O95759 1140 aa7□□□□□ -1.29
SMCHD1-208ENST00000583344 EPHX1P07099 455 aa7□□□□□ -1.29
SMCHD1-208ENST00000583344 PFKLP17858 780 aa7□□□□□ -1.29
SMCHD1-208ENST00000583344 L1CAMP32004 1257 aa7□□□□□ -1.29
SMCHD1-208ENST00000583344 PRR5P85299 388 aa7□□□□□ -1.29
SMCHD1-208ENST00000583344 COL9A2Q14055 689 aaPredicted RBP7□□□□□ -1.29
SMCHD1-208ENST00000583344 DPY19L1Q2PZI1 675 aa7□□□□□ -1.29
SMCHD1-208ENST00000583344 HEATR6Q6AI08 1181 aaKnown RBP7□□□□□ -1.29
SMCHD1-208ENST00000583344 SP8Q8IXZ3 490 aa7□□□□□ -1.29
SMCHD1-208ENST00000583344 LINC01356Q8N9X3 169 aa7□□□□□ -1.29
SMCHD1-208ENST00000583344 GPRASP2Q96D09 838 aa7□□□□□ -1.29
SMCHD1-208ENST00000583344 FBLN5Q9UBX5 448 aa7□□□□□ -1.29
SMCHD1-208ENST00000583344 DIS3Q9Y2L1 958 aaKnown RBP7□□□□□ -1.29
SMCHD1-208ENST00000583344 A0A1W2PQH9 124 aa6.99□□□□□ -1.29
SMCHD1-208ENST00000583344 F8W031 263 aaPredicted RBP6.99□□□□□ -1.29
SMCHD1-208ENST00000583344 FFAR3O14843 346 aa6.99□□□□□ -1.29
SMCHD1-208ENST00000583344 AURKAO14965 403 aa6.99□□□□□ -1.29
SMCHD1-208ENST00000583344 GIPRP48546 466 aa6.99□□□□□ -1.29
SMCHD1-208ENST00000583344 CORO7P57737 925 aa6.99□□□□□ -1.29
SMCHD1-208ENST00000583344 RCSD1Q6JBY9 416 aa6.99□□□□□ -1.29
SMCHD1-208ENST00000583344 KLHL6Q8WZ60 621 aa6.99□□□□□ -1.29
SMCHD1-208ENST00000583344 GBP3Q9H0R5 595 aa6.99□□□□□ -1.29
SMCHD1-208ENST00000583344 ADAM7Q9H2U9 754 aa6.99□□□□□ -1.29
SMCHD1-208ENST00000583344 PHAXQ9H814 394 aaKnown RBP6.99□□□□□ -1.29
SMCHD1-208ENST00000583344 PLA2G1BP04054 148 aaKnown RBP6.98□□□□□ -1.29
SMCHD1-208ENST00000583344 ATF2P15336 505 aa6.98□□□□□ -1.29
SMCHD1-208ENST00000583344 SYN1P17600 705 aa6.98□□□□□ -1.29
SMCHD1-208ENST00000583344 VAMP1P23763 118 aa6.98□□□□□ -1.29
SMCHD1-208ENST00000583344 MC3RP41968 323 aa6.98□□□□□ -1.29
SMCHD1-208ENST00000583344 SLC7A5Q01650 507 aa6.98□□□□□ -1.29
SMCHD1-208ENST00000583344 C9orf131Q5VYM1 1079 aa6.98□□□□□ -1.29
SMCHD1-208ENST00000583344 ADAT2Q7Z6V5 191 aaKnown RBP6.98□□□□□ -1.29
SMCHD1-208ENST00000583344 ADGRG2Q8IZP9 1017 aa6.98□□□□□ -1.29
SMCHD1-208ENST00000583344 RGS22Q8NE09 1264 aa6.98□□□□□ -1.29
SMCHD1-208ENST00000583344 BCAS3Q9H6U6 928 aa6.98□□□□□ -1.29
SMCHD1-208ENST00000583344 LUC7LQ9NQ29 371 aaKnown RBP6.98□□□□□ -1.29
SMCHD1-208ENST00000583344 CGGBP1Q9UFW8 167 aaPredicted RBP6.98□□□□□ -1.29
SMCHD1-208ENST00000583344 DBR1Q9UK59 544 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms