RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 FBXO16Q8IX29 292 aaPredicted RBP19.22■□□□□ 0.67
SREBF1-221ENST00000583080 HERVK_113Q902F9 699 aa19.22■□□□□ 0.67
SREBF1-221ENST00000583080 GPATCH3Q96I76 525 aa19.22■□□□□ 0.67
SREBF1-221ENST00000583080 NKX2-4Q9H2Z4 354 aa19.22■□□□□ 0.67
SREBF1-221ENST00000583080 HIPK3Q9H422 1215 aa19.22■□□□□ 0.67
SREBF1-221ENST00000583080 PDGFCQ9NRA1 345 aa19.22■□□□□ 0.67
SREBF1-221ENST00000583080 RCAN3Q9UKA8 241 aa19.22■□□□□ 0.67
SREBF1-221ENST00000583080 YBX2Q9Y2T7 364 aaKnown RBP19.22■□□□□ 0.67
SREBF1-221ENST00000583080 PATL2C9JE40 543 aaKnown RBP19.21■□□□□ 0.67
SREBF1-221ENST00000583080 TNFRSF10AO00220 468 aa19.21■□□□□ 0.67
SREBF1-221ENST00000583080 ALAS1P13196 640 aa19.21■□□□□ 0.67
SREBF1-221ENST00000583080 TFAP4Q01664 338 aa19.21■□□□□ 0.67
SREBF1-221ENST00000583080 IKQ13123 557 aaPredicted RBP19.21■□□□□ 0.67
SREBF1-221ENST00000583080 MUM1L1Q5H9M0 696 aa19.21■□□□□ 0.67
SREBF1-221ENST00000583080 AKNAD1Q5T1N1 836 aa19.21■□□□□ 0.67
SREBF1-221ENST00000583080 KCTD1Q719H9 257 aa19.21■□□□□ 0.67
SREBF1-221ENST00000583080 EEPD1Q7L9B9 569 aa19.21■□□□□ 0.67
SREBF1-221ENST00000583080 GMCL1Q96IK5 515 aa19.21■□□□□ 0.67
SREBF1-221ENST00000583080 TRERF1Q96PN7 1200 aa19.21■□□□□ 0.67
SREBF1-221ENST00000583080 WNT8AQ9H1J5 351 aa19.21■□□□□ 0.67
SREBF1-221ENST00000583080 ASB14A6NK59 587 aa19.2■□□□□ 0.66
SREBF1-221ENST00000583080 FDX1P10109 184 aa19.2■□□□□ 0.66
SREBF1-221ENST00000583080 MCCP23508 829 aa19.2■□□□□ 0.66
SREBF1-221ENST00000583080 SLC1A4P43007 532 aa19.2■□□□□ 0.66
SREBF1-221ENST00000583080 CCL23P55773 120 aa19.2■□□□□ 0.66
SREBF1-221ENST00000583080 PSMC6P62333 389 aa19.2■□□□□ 0.66
SREBF1-221ENST00000583080 PDE4BQ07343 736 aa19.2■□□□□ 0.66
SREBF1-221ENST00000583080 PPARAQ07869 468 aa19.2■□□□□ 0.66
SREBF1-221ENST00000583080 ITGA7Q13683 1181 aa19.2■□□□□ 0.66
SREBF1-221ENST00000583080 RAB30Q15771 203 aa19.2■□□□□ 0.66
SREBF1-221ENST00000583080 CCDC85BQ15834 202 aaPredicted RBP19.2■□□□□ 0.66
SREBF1-221ENST00000583080 FAM160B2Q86V87 743 aa19.2■□□□□ 0.66
SREBF1-221ENST00000583080 STAG1Q8WVM7 1258 aa19.2■□□□□ 0.66
SREBF1-221ENST00000583080 PURBQ96QR8 312 aaKnown RBP19.2■□□□□ 0.66
SREBF1-221ENST00000583080 NOC4LQ9BVI4 516 aaKnown RBP19.2■□□□□ 0.66
SREBF1-221ENST00000583080 TRPV6Q9H1D0 765 aa19.2■□□□□ 0.66
SREBF1-221ENST00000583080 DCTPP1Q9H773 170 aa19.2■□□□□ 0.66
SREBF1-221ENST00000583080 THEGQ9P2T0 379 aa19.2■□□□□ 0.66
SREBF1-221ENST00000583080 MSRAQ9UJ68 235 aa19.2■□□□□ 0.66
SREBF1-221ENST00000583080 DYNC1LI2O43237 492 aaPredicted RBP19.19■□□□□ 0.66
SREBF1-221ENST00000583080 B4GALT4O60513 344 aa19.19■□□□□ 0.66
SREBF1-221ENST00000583080 NMT2O60551 498 aa19.19■□□□□ 0.66
SREBF1-221ENST00000583080 TAPT1Q6NXT6 567 aa19.19■□□□□ 0.66
SREBF1-221ENST00000583080 OTOP2Q7RTS6 562 aa19.19■□□□□ 0.66
SREBF1-221ENST00000583080 CHURC1Q8WUH1 139 aa19.19■□□□□ 0.66
SREBF1-221ENST00000583080 NACAP1Q9BZK3 213 aa19.19■□□□□ 0.66
SREBF1-221ENST00000583080 NAPBQ9H115 298 aa19.19■□□□□ 0.66
SREBF1-221ENST00000583080 CHD7Q9P2D1 2997 aa19.19■□□□□ 0.66
SREBF1-221ENST00000583080 FOXP2O15409 715 aa19.18■□□□□ 0.66
SREBF1-221ENST00000583080 CABYRO75952 493 aa19.18■□□□□ 0.66
SREBF1-221ENST00000583080 FGBP02675 491 aa19.18■□□□□ 0.66
SREBF1-221ENST00000583080 IGFBP4P22692 258 aa19.18■□□□□ 0.66
SREBF1-221ENST00000583080 RABGGTBP53611 331 aa19.18■□□□□ 0.66
SREBF1-221ENST00000583080 TKFCQ3LXA3 575 aa19.18■□□□□ 0.66
SREBF1-221ENST00000583080 OTUD7AQ8TE49 926 aaPredicted RBP19.18■□□□□ 0.66
SREBF1-221ENST00000583080 VWCEQ96DN2 955 aa19.18■□□□□ 0.66
SREBF1-221ENST00000583080 AP5M1Q9H0R1 490 aa19.18■□□□□ 0.66
SREBF1-221ENST00000583080 INCENPQ9NQS7 918 aa19.18■□□□□ 0.66
SREBF1-221ENST00000583080 CYP39A1Q9NYL5 469 aa19.18■□□□□ 0.66
SREBF1-221ENST00000583080 PRR12Q9ULL5 1215 aa19.18■□□□□ 0.66
SREBF1-221ENST00000583080 STX8Q9UNK0 236 aa19.18■□□□□ 0.66
SREBF1-221ENST00000583080 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.18■□□□□ 0.66
SREBF1-221ENST00000583080 ZMYM1Q5SVZ6 1142 aa19.17■□□□□ 0.66
SREBF1-221ENST00000583080 NSMFQ6X4W1 530 aa19.17■□□□□ 0.66
SREBF1-221ENST00000583080 PI4K2BQ8TCG2 481 aa19.17■□□□□ 0.66
SREBF1-221ENST00000583080 ATXN2LQ8WWM7 1075 aaKnown RBP19.17■□□□□ 0.66
SREBF1-221ENST00000583080 SCLYQ96I15 445 aa19.17■□□□□ 0.66
SREBF1-221ENST00000583080 ASB2Q96Q27 587 aa19.17■□□□□ 0.66
SREBF1-221ENST00000583080 MTIF3Q9H2K0 278 aaKnown RBP19.17■□□□□ 0.66
SREBF1-221ENST00000583080 IL17RBQ9NRM6 502 aa19.17■□□□□ 0.66
SREBF1-221ENST00000583080 MTMR7Q9Y216 660 aa19.17■□□□□ 0.66
SREBF1-221ENST00000583080 PLA2G6O60733 806 aa19.16■□□□□ 0.66
SREBF1-221ENST00000583080 SLC3A2P08195 630 aaKnown RBP19.16■□□□□ 0.66
SREBF1-221ENST00000583080 MYOGP15173 224 aa19.16■□□□□ 0.66
SREBF1-221ENST00000583080 CTDSPL2Q05D32 466 aa19.16■□□□□ 0.66
SREBF1-221ENST00000583080 ADAMTS19Q8TE59 1207 aa19.16■□□□□ 0.66
SREBF1-221ENST00000583080 FSD1Q9BTV5 496 aa19.16■□□□□ 0.66
SREBF1-221ENST00000583080 SLC28A3Q9HAS3 691 aa19.16■□□□□ 0.66
SREBF1-221ENST00000583080 CCPG1Q9ULG6 757 aa19.16■□□□□ 0.66
SREBF1-221ENST00000583080 COL9A1P20849 921 aa19.15■□□□□ 0.66
SREBF1-221ENST00000583080 DIEXFQ68CQ4 756 aaKnown RBP19.15■□□□□ 0.66
SREBF1-221ENST00000583080 RCSD1Q6JBY9 416 aa19.15■□□□□ 0.66
SREBF1-221ENST00000583080 RAPGEFL1Q9UHV5 662 aa19.15■□□□□ 0.66
SREBF1-221ENST00000583080 TSPY2A6NKD2 308 aa19.14■□□□□ 0.65
SREBF1-221ENST00000583080 ZEB2O60315 1214 aa19.14■□□□□ 0.65
SREBF1-221ENST00000583080 LRRFIP1Q32MZ4 808 aaKnown RBP19.14■□□□□ 0.65
SREBF1-221ENST00000583080 IQSEC1Q6DN90 963 aa19.14■□□□□ 0.65
SREBF1-221ENST00000583080 KIAA1211Q6ZU35 1233 aa19.14■□□□□ 0.65
SREBF1-221ENST00000583080 MORC4Q8TE76 937 aa19.14■□□□□ 0.65
SREBF1-221ENST00000583080 ALDH8A1Q9H2A2 487 aaPredicted RBP19.14■□□□□ 0.65
SREBF1-221ENST00000583080 VTA1Q9NP79 307 aa19.14■□□□□ 0.65
SREBF1-221ENST00000583080 TRMT13Q9NUP7 481 aaKnown RBP19.14■□□□□ 0.65
SREBF1-221ENST00000583080 Q9Y3F1 56 aa19.14■□□□□ 0.65
SREBF1-221ENST00000583080 TTC41PQ6P2S7 1318 aa19.14■□□□□ 0.65
SREBF1-221ENST00000583080 ZBBXA8MT70 800 aa19.13■□□□□ 0.65
SREBF1-221ENST00000583080 ICAM1P05362 532 aa19.13■□□□□ 0.65
SREBF1-221ENST00000583080 MRPS5P82675 430 aaKnown RBP19.13■□□□□ 0.65
SREBF1-221ENST00000583080 CCDC96Q2M329 555 aa19.13■□□□□ 0.65
SREBF1-221ENST00000583080 PPP2R2DQ66LE6 453 aa19.13■□□□□ 0.65
SREBF1-221ENST00000583080 TTBK2Q6IQ55 1244 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms