RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 CCDC174Q6PII3 467 aa13.79□□□□□ -0.2
CCDC57-216ENST00000582885 BLIDQ8IZY5 108 aa13.79□□□□□ -0.2
CCDC57-216ENST00000582885 P2RX7Q99572 595 aaKnown RBP13.79□□□□□ -0.2
CCDC57-216ENST00000582885 RIC8AQ9NPQ8 531 aa13.79□□□□□ -0.2
CCDC57-216ENST00000582885 ZNF214Q9UL59 606 aaPredicted RBP13.79□□□□□ -0.2
CCDC57-216ENST00000582885 MRPL11Q9Y3B7 192 aaKnown RBP13.79□□□□□ -0.2
CCDC57-216ENST00000582885 BTBD18B2RXH4 712 aa13.78□□□□□ -0.2
CCDC57-216ENST00000582885 PDHXO00330 501 aa13.78□□□□□ -0.2
CCDC57-216ENST00000582885 ADCY7P51828 1080 aa13.78□□□□□ -0.2
CCDC57-216ENST00000582885 GHRHRQ02643 423 aa13.78□□□□□ -0.2
CCDC57-216ENST00000582885 MKRN3Q13064 507 aaKnown RBP13.78□□□□□ -0.2
CCDC57-216ENST00000582885 TKFCQ3LXA3 575 aa13.78□□□□□ -0.2
CCDC57-216ENST00000582885 NOSTRINQ8IVI9 506 aa13.78□□□□□ -0.2
CCDC57-216ENST00000582885 REM2Q8IYK8 340 aaPredicted RBP13.78□□□□□ -0.2
CCDC57-216ENST00000582885 TNPO1Q92973 898 aaKnown RBP13.78□□□□□ -0.2
CCDC57-216ENST00000582885 CUL5Q93034 780 aa13.78□□□□□ -0.2
CCDC57-216ENST00000582885 TNFRSF25Q93038 417 aa13.78□□□□□ -0.2
CCDC57-216ENST00000582885 PTPN18Q99952 460 aa13.78□□□□□ -0.2
CCDC57-216ENST00000582885 TEX13BQ9BXU2 312 aa13.78□□□□□ -0.2
CCDC57-216ENST00000582885 PSTPIP2Q9H939 334 aa13.78□□□□□ -0.2
CCDC57-216ENST00000582885 MAP3K20Q9NYL2 800 aaKnown RBP13.78□□□□□ -0.2
CCDC57-216ENST00000582885 CCPG1Q9ULG6 757 aa13.78□□□□□ -0.2
CCDC57-216ENST00000582885 RABGAP1Q9Y3P9 1069 aa13.78□□□□□ -0.2
CCDC57-216ENST00000582885 PLXNB2O15031 1838 aa13.78□□□□□ -0.2
CCDC57-216ENST00000582885 MGAMO43451 1857 aa13.78□□□□□ -0.2
CCDC57-216ENST00000582885 PLXNA1Q9UIW2 1896 aa13.78□□□□□ -0.2
CCDC57-216ENST00000582885 LCTP09848 1927 aa13.78□□□□□ -0.2
CCDC57-216ENST00000582885 PIK3CDO00329 1044 aa13.77□□□□□ -0.21
CCDC57-216ENST00000582885 TM4SF4P48230 202 aa13.77□□□□□ -0.21
CCDC57-216ENST00000582885 GCLCP48506 637 aaPredicted RBP13.77□□□□□ -0.21
CCDC57-216ENST00000582885 SREBF2Q12772 1141 aa13.77□□□□□ -0.21
CCDC57-216ENST00000582885 GNL2Q13823 731 aaKnown RBP13.77□□□□□ -0.21
CCDC57-216ENST00000582885 TMEM132BQ14DG7 1078 aa13.77□□□□□ -0.21
CCDC57-216ENST00000582885 DEFB115Q30KQ5 88 aa13.77□□□□□ -0.21
CCDC57-216ENST00000582885 USH1GQ495M9 461 aa13.77□□□□□ -0.21
CCDC57-216ENST00000582885 ATL3Q6DD88 541 aa13.77□□□□□ -0.21
CCDC57-216ENST00000582885 SAMD1Q6SPF0 538 aaPredicted RBP13.77□□□□□ -0.21
CCDC57-216ENST00000582885 FERMT3Q86UX7 667 aa13.77□□□□□ -0.21
CCDC57-216ENST00000582885 REXO1Q8N1G1 1221 aaKnown RBP13.77□□□□□ -0.21
CCDC57-216ENST00000582885 OXER1Q8TDS5 423 aa13.77□□□□□ -0.21
CCDC57-216ENST00000582885 AGBL1Q96MI9 1066 aa13.77□□□□□ -0.21
CCDC57-216ENST00000582885 THSD7BQ9C0I4 1608 aa13.77□□□□□ -0.21
CCDC57-216ENST00000582885 RAVER2Q9HCJ3 691 aaKnown RBP13.77□□□□□ -0.21
CCDC57-216ENST00000582885 KIF28PB7ZC32 967 aa13.76□□□□□ -0.21
CCDC57-216ENST00000582885 OPLAHO14841 1288 aa13.76□□□□□ -0.21
CCDC57-216ENST00000582885 COPB2P35606 906 aa13.76□□□□□ -0.21
CCDC57-216ENST00000582885 STAT3P40763 770 aa13.76□□□□□ -0.21
CCDC57-216ENST00000582885 CLK2P49760 499 aaKnown RBP13.76□□□□□ -0.21
CCDC57-216ENST00000582885 NOGQ13253 232 aa13.76□□□□□ -0.21
CCDC57-216ENST00000582885 POTEEQ6S8J3 1075 aa13.76□□□□□ -0.21
CCDC57-216ENST00000582885 KRT25Q7Z3Z0 450 aa13.76□□□□□ -0.21
CCDC57-216ENST00000582885 MCF2L2Q86YR7 1114 aa13.76□□□□□ -0.21
CCDC57-216ENST00000582885 CPXCR1Q8N123 301 aa13.76□□□□□ -0.21
CCDC57-216ENST00000582885 FAM43AQ8N2R8 423 aa13.76□□□□□ -0.21
CCDC57-216ENST00000582885 PARK7Q99497 189 aaKnown RBP13.76□□□□□ -0.21
CCDC57-216ENST00000582885 PCDHA6Q9UN73 950 aa13.76□□□□□ -0.21
CCDC57-216ENST00000582885 PCDHA8Q9Y5H6 950 aa13.76□□□□□ -0.21
CCDC57-216ENST00000582885 MEIS2O14770 477 aa13.75□□□□□ -0.21
CCDC57-216ENST00000582885 FOSP01100 380 aaPredicted RBP13.75□□□□□ -0.21
CCDC57-216ENST00000582885 ALAS1P13196 640 aa13.75□□□□□ -0.21
CCDC57-216ENST00000582885 NR5A1Q13285 461 aa13.75□□□□□ -0.21
CCDC57-216ENST00000582885 AP3B2Q13367 1082 aa13.75□□□□□ -0.21
CCDC57-216ENST00000582885 FOXD4L5Q5VV16 416 aaPredicted RBP13.75□□□□□ -0.21
CCDC57-216ENST00000582885 SNRNP48Q6IEG0 339 aaKnown RBP13.75□□□□□ -0.21
CCDC57-216ENST00000582885 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.75□□□□□ -0.21
CCDC57-216ENST00000582885 IFNL1Q8IU54 200 aa13.75□□□□□ -0.21
CCDC57-216ENST00000582885 RIOX2Q8IUF8 465 aa13.75□□□□□ -0.21
CCDC57-216ENST00000582885 CHST13Q8NET6 341 aa13.75□□□□□ -0.21
CCDC57-216ENST00000582885 CLEC4DQ8WXI8 215 aa13.75□□□□□ -0.21
CCDC57-216ENST00000582885 FOXD4L4Q8WXT5 416 aaPredicted RBP13.75□□□□□ -0.21
CCDC57-216ENST00000582885 BTBD7Q9P203 1132 aa13.75□□□□□ -0.21
CCDC57-216ENST00000582885 RBPJLQ9UBG7 517 aa13.75□□□□□ -0.21
CCDC57-216ENST00000582885 IGF2BP3O00425 579 aaKnown RBP eCLIP13.74□□□□□ -0.21
CCDC57-216ENST00000582885 CNMDO75829 334 aa13.74□□□□□ -0.21
CCDC57-216ENST00000582885 SLC25A27O95847 323 aa13.74□□□□□ -0.21
CCDC57-216ENST00000582885 TRAPPC10P48553 1259 aa13.74□□□□□ -0.21
CCDC57-216ENST00000582885 HSD17B4P51659 736 aa13.74□□□□□ -0.21
CCDC57-216ENST00000582885 RILPL1Q5EBL4 403 aa13.74□□□□□ -0.21
CCDC57-216ENST00000582885 MYSM1Q5VVJ2 828 aa13.74□□□□□ -0.21
CCDC57-216ENST00000582885 CYP4F22Q6NT55 531 aa13.74□□□□□ -0.21
CCDC57-216ENST00000582885 CAPNS2Q96L46 248 aa13.74□□□□□ -0.21
CCDC57-216ENST00000582885 ZNF396Q96N95 335 aaPredicted RBP13.74□□□□□ -0.21
CCDC57-216ENST00000582885 TRERF1Q96PN7 1200 aa13.74□□□□□ -0.21
CCDC57-216ENST00000582885 GBP4Q96PP9 640 aa13.74□□□□□ -0.21
CCDC57-216ENST00000582885 SPATC1LQ9H0A9 340 aa13.74□□□□□ -0.21
CCDC57-216ENST00000582885 RNF146Q9NTX7 359 aa13.74□□□□□ -0.21
CCDC57-216ENST00000582885 MORF4L1Q9UBU8 362 aa13.74□□□□□ -0.21
CCDC57-216ENST00000582885 FBXO40Q9UH90 709 aa13.74□□□□□ -0.21
CCDC57-216ENST00000582885 RIPK3Q9Y572 518 aa13.74□□□□□ -0.21
CCDC57-216ENST00000582885 DOCK3Q8IZD9 2030 aa13.74□□□□□ -0.21
CCDC57-216ENST00000582885 KIAA1217Q5T5P2 1943 aa13.74□□□□□ -0.21
CCDC57-216ENST00000582885 ZNF236Q9UL36 1845 aa13.74□□□□□ -0.21
CCDC57-216ENST00000582885 ADGRA2Q96PE1 1338 aa13.73□□□□□ -0.21
CCDC57-216ENST00000582885 CCDC194A0A1B0GVG4 234 aa13.73□□□□□ -0.21
CCDC57-216ENST00000582885 GCOM1H8Y6P7 765 aaPredicted RBP13.73□□□□□ -0.21
CCDC57-216ENST00000582885 ADAMTS3O15072 1205 aa13.73□□□□□ -0.21
CCDC57-216ENST00000582885 BAG4O95429 457 aaKnown RBP13.73□□□□□ -0.21
CCDC57-216ENST00000582885 POLR2MP0CAP2 368 aa13.73□□□□□ -0.21
CCDC57-216ENST00000582885 CYP2C8P10632 490 aa13.73□□□□□ -0.21
CCDC57-216ENST00000582885 SHCBP1Q8NEM2 672 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms