RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 MTMR4Q9NYA4 1195 aa12.05□□□□□ -0.48
CDK5RAP3-225ENST00000582482 TRPC5Q9UL62 973 aaPredicted RBP12.05□□□□□ -0.48
CDK5RAP3-225ENST00000582482 SMCHD1A6NHR9 2005 aa12.05□□□□□ -0.48
CDK5RAP3-225ENST00000582482 DDTLA6NHG4 134 aaPredicted RBP12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 USP17L15C9J2P7 530 aa12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 USP17L13C9JLJ4 530 aa12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 USP17L11C9JVI0 530 aa12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 USP17L18D6R9N7 530 aa12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 USP17L22D6RA61 530 aa12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 USP17L17D6RBQ6 530 aa12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 USP17L19D6RCP7 530 aa12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 USP17L20D6RJB6 530 aa12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 ARHGAP6O43182 974 aa12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 SHMT1P34896 483 aa12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 UBXN1Q04323 297 aa12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 USP17L24Q0WX57 530 aa12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 TCP11X2Q5H9J9 407 aa12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 USP17L6PQ6QN14 398 aa12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 ANKS1AQ92625 1134 aa12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 RRP36Q96EU6 259 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 SLF1Q9BQI6 1058 aa12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 FGFBP2Q9BYJ0 223 aa12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 BCAS3Q9H6U6 928 aa12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 TBC1D7Q9P0N9 293 aa12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 PUF60Q9UHX1 559 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 GAKO14976 1311 aa12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 MFAP3LO75121 409 aa12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 SRGNP10124 158 aa12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 ASIC1P78348 528 aa12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 ZNF658Q5TYW1 1059 aaPredicted RBP12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 PPFIBP1Q86W92 1011 aa12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 ADGRF4Q8IZF3 695 aa12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 ZC3H12CQ9C0D7 883 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 ZMYND12Q9H0C1 365 aa12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 SEC63Q9UGP8 760 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 SPATA31A6Q5VVP1 1343 aa12.04□□□□□ -0.48
CDK5RAP3-225ENST00000582482 NPHP3-ACAD11A0A0J9YXS1 232 aa12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 G3V3G9 751 aa12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 OR52Z1P0C646 297 aa12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 LONP1P36776 959 aaKnown RBP12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 NONOQ15233 471 aaKnown RBP eCLIP12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 KCTD19Q17RG1 926 aaPredicted RBP12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 DCAF8Q5TAQ9 597 aa12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 ANKRD40Q6AI12 368 aa12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 APOBEC3HQ6NTF7 200 aaKnown RBP12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 ELOA2Q8IYF1 753 aaPredicted RBP12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 CCDC155Q8N6L0 562 aa12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 KIFC2Q96AC6 838 aa12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 TRIM47Q96LD4 638 aa12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 L2HGDHQ9H9P8 463 aa12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 ZHX1Q9UKY1 873 aaPredicted RBP12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 BBOX1O75936 387 aa12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 STAT3P40763 770 aa12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 APBA1Q02410 837 aa12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 TEX35Q5T0J7 233 aa12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 SH3BP5LQ7L8J4 393 aa12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 ADSSL1Q8N142 457 aa12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 REXO1Q8N1G1 1221 aaKnown RBP12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 CCDC12Q8WUD4 166 aaPredicted RBP12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 ERO1AQ96HE7 468 aa12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 MAP7D2Q96T17 732 aa12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 P2RX7Q99572 595 aaKnown RBP12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 DUSP9Q99956 384 aaKnown RBP12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 HINFPQ9BQA5 517 aa12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 JMJD4Q9H9V9 463 aa12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 KCND1Q9NSA2 647 aa12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 TCP11L1Q9NUJ3 509 aa12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 ADGRG1Q9Y653 693 aa12.03□□□□□ -0.48
CDK5RAP3-225ENST00000582482 APBA3O96018 575 aa12.02□□□□□ -0.48
CDK5RAP3-225ENST00000582482 TRAPPC10P48553 1259 aa12.02□□□□□ -0.48
CDK5RAP3-225ENST00000582482 GABPAQ06546 454 aa12.02□□□□□ -0.48
CDK5RAP3-225ENST00000582482 PDE4DQ08499 809 aa12.02□□□□□ -0.48
CDK5RAP3-225ENST00000582482 SOGA3Q5TF21 947 aa12.02□□□□□ -0.48
CDK5RAP3-225ENST00000582482 NEK8Q86SG6 692 aa12.02□□□□□ -0.48
CDK5RAP3-225ENST00000582482 ZSCAN29Q8IWY8 852 aaPredicted RBP12.02□□□□□ -0.48
CDK5RAP3-225ENST00000582482 CDAN1Q8IWY9 1227 aa12.02□□□□□ -0.48
CDK5RAP3-225ENST00000582482 SPICE1Q8N0Z3 855 aa12.02□□□□□ -0.48
CDK5RAP3-225ENST00000582482 PKNOX2Q96KN3 472 aa12.02□□□□□ -0.48
CDK5RAP3-225ENST00000582482 AGPAT5Q9NUQ2 364 aa12.02□□□□□ -0.48
CDK5RAP3-225ENST00000582482 RWDD2AQ9UIY3 292 aa12.02□□□□□ -0.48
CDK5RAP3-225ENST00000582482 ATP6V0A2Q9Y487 856 aa12.02□□□□□ -0.48
CDK5RAP3-225ENST00000582482 SCN9AQ15858 1988 aa12.02□□□□□ -0.48
CDK5RAP3-225ENST00000582482 TTC26A0AVF1 554 aa12.02□□□□□ -0.49
CDK5RAP3-225ENST00000582482 MYMKA6NI61 221 aa12.02□□□□□ -0.49
CDK5RAP3-225ENST00000582482 RASSF10A6NK89 507 aa12.02□□□□□ -0.49
CDK5RAP3-225ENST00000582482 BMP15O95972 392 aa12.02□□□□□ -0.49
CDK5RAP3-225ENST00000582482 HOXA10P31260 410 aaPredicted RBP12.02□□□□□ -0.49
CDK5RAP3-225ENST00000582482 CASQ1P31415 396 aa12.02□□□□□ -0.49
CDK5RAP3-225ENST00000582482 TXLNAP40222 546 aa12.02□□□□□ -0.49
CDK5RAP3-225ENST00000582482 CLCN6P51797 869 aa12.02□□□□□ -0.49
CDK5RAP3-225ENST00000582482 GRB10Q13322 594 aa12.02□□□□□ -0.49
CDK5RAP3-225ENST00000582482 KIAA0895Q8NCT3 520 aa12.02□□□□□ -0.49
CDK5RAP3-225ENST00000582482 CCDC148Q8NFR7 591 aa12.02□□□□□ -0.49
CDK5RAP3-225ENST00000582482 PNMA5Q96PV4 448 aa12.02□□□□□ -0.49
CDK5RAP3-225ENST00000582482 SPZ1Q9BXG8 430 aa12.02□□□□□ -0.49
CDK5RAP3-225ENST00000582482 COL11A2P13942 1736 aaPredicted RBP12.02□□□□□ -0.49
CDK5RAP3-225ENST00000582482 ENC1O14682 589 aa12.01□□□□□ -0.49
CDK5RAP3-225ENST00000582482 EPHB6O15197 1021 aa12.01□□□□□ -0.49
CDK5RAP3-225ENST00000582482 NRDCO43847 1150 aa12.01□□□□□ -0.49
CDK5RAP3-225ENST00000582482 ONECUT3O60422 494 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms