RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 MCM9Q9NXL9 1143 aa11.17□□□□□ -0.62
GGA3-212ENST00000582376 SWAP70Q9UH65 585 aa11.17□□□□□ -0.62
GGA3-212ENST00000582376 ATP2A1O14983 1001 aa11.16□□□□□ -0.62
GGA3-212ENST00000582376 AKR1B1P15121 316 aa11.16□□□□□ -0.62
GGA3-212ENST00000582376 SMPD1P17405 629 aa11.16□□□□□ -0.62
GGA3-212ENST00000582376 PTGS1P23219 599 aa11.16□□□□□ -0.62
GGA3-212ENST00000582376 ID4P47928 161 aa11.16□□□□□ -0.62
GGA3-212ENST00000582376 TRIM67Q6ZTA4 783 aa11.16□□□□□ -0.62
GGA3-212ENST00000582376 CPXCR1Q8N123 301 aa11.16□□□□□ -0.62
GGA3-212ENST00000582376 FBXL6Q8N531 539 aa11.16□□□□□ -0.62
GGA3-212ENST00000582376 MEIS3Q99687 375 aa11.16□□□□□ -0.62
GGA3-212ENST00000582376 DBNDD2Q9BQY9 259 aa11.16□□□□□ -0.62
GGA3-212ENST00000582376 FBXO40Q9UH90 709 aa11.16□□□□□ -0.62
GGA3-212ENST00000582376 Q9Y3F1 56 aa11.16□□□□□ -0.62
GGA3-212ENST00000582376 CTDP1Q9Y5B0 961 aaPredicted RBP11.16□□□□□ -0.62
GGA3-212ENST00000582376 SIP14410 1827 aa11.16□□□□□ -0.62
GGA3-212ENST00000582376 PTPRSQ13332 1948 aa11.15□□□□□ -0.62
GGA3-212ENST00000582376 WDFY4Q6ZS81 3184 aa11.15□□□□□ -0.62
GGA3-212ENST00000582376 ASB14A6NK59 587 aa11.15□□□□□ -0.62
GGA3-212ENST00000582376 GJB5O95377 273 aa11.15□□□□□ -0.62
GGA3-212ENST00000582376 EEF2P13639 858 aaKnown RBP11.15□□□□□ -0.62
GGA3-212ENST00000582376 DEFB103AP81534 67 aa11.15□□□□□ -0.62
GGA3-212ENST00000582376 MTX1Q13505 466 aa11.15□□□□□ -0.62
GGA3-212ENST00000582376 BFSP2Q13515 415 aa11.15□□□□□ -0.62
GGA3-212ENST00000582376 FAM47CQ5HY64 1035 aa11.15□□□□□ -0.62
GGA3-212ENST00000582376 IQSEC1Q6DN90 963 aa11.15□□□□□ -0.62
GGA3-212ENST00000582376 BANK1Q8NDB2 785 aa11.15□□□□□ -0.62
GGA3-212ENST00000582376 CHST13Q8NET6 341 aa11.15□□□□□ -0.62
GGA3-212ENST00000582376 ZNF512BQ96KM6 892 aaPredicted RBP11.15□□□□□ -0.62
GGA3-212ENST00000582376 CCDC17Q96LX7 622 aa11.15□□□□□ -0.62
GGA3-212ENST00000582376 RIOK1Q9BRS2 568 aaKnown RBP11.15□□□□□ -0.62
GGA3-212ENST00000582376 POLR3EQ9NVU0 708 aa11.15□□□□□ -0.62
GGA3-212ENST00000582376 ZFHX2Q9C0A1 2572 aaPredicted RBP11.15□□□□□ -0.63
GGA3-212ENST00000582376 SPTBN4Q9H254 2564 aa11.15□□□□□ -0.63
GGA3-212ENST00000582376 NAV1Q8NEY1 1877 aa11.15□□□□□ -0.63
GGA3-212ENST00000582376 TET1Q8NFU7 2136 aa11.14□□□□□ -0.63
GGA3-212ENST00000582376 PROB1E7EW31 1015 aa11.14□□□□□ -0.63
GGA3-212ENST00000582376 ZBED4O75132 1171 aa11.14□□□□□ -0.63
GGA3-212ENST00000582376 CNTN2Q02246 1040 aa11.14□□□□□ -0.63
GGA3-212ENST00000582376 SMAD2Q15796 467 aaKnown RBP11.14□□□□□ -0.63
GGA3-212ENST00000582376 LRRFIP1Q32MZ4 808 aaKnown RBP11.14□□□□□ -0.63
GGA3-212ENST00000582376 TNNI3KQ59H18 835 aa11.14□□□□□ -0.63
GGA3-212ENST00000582376 TCEAL5Q5H9L2 206 aa11.14□□□□□ -0.63
GGA3-212ENST00000582376 TMED8Q6PL24 325 aaPredicted RBP11.14□□□□□ -0.63
GGA3-212ENST00000582376 DYNLL2Q96FJ2 89 aa11.14□□□□□ -0.63
GGA3-212ENST00000582376 C17orf80Q9BSJ5 609 aa11.14□□□□□ -0.63
GGA3-212ENST00000582376 CRNKL1Q9BZJ0 848 aaKnown RBP11.14□□□□□ -0.63
GGA3-212ENST00000582376 RAVER2Q9HCJ3 691 aaKnown RBP11.14□□□□□ -0.63
GGA3-212ENST00000582376 ALG13Q9NP73 1137 aaKnown RBP11.14□□□□□ -0.63
GGA3-212ENST00000582376 GPR108Q9NPR9 543 aa11.14□□□□□ -0.63
GGA3-212ENST00000582376 CLDND1Q9NY35 253 aa11.14□□□□□ -0.63
GGA3-212ENST00000582376 FPGT-TNNI3KV9GXZ4 949 aa11.14□□□□□ -0.63
GGA3-212ENST00000582376 TANC1Q9C0D5 1861 aa11.14□□□□□ -0.63
GGA3-212ENST00000582376 MAGEB6P1A0A0J9YX57 407 aa11.13□□□□□ -0.63
GGA3-212ENST00000582376 CYP2D6P10635 497 aa11.13□□□□□ -0.63
GGA3-212ENST00000582376 PURAQ00577 322 aaKnown RBP11.13□□□□□ -0.63
GGA3-212ENST00000582376 COL19A1Q14993 1142 aa11.13□□□□□ -0.63
GGA3-212ENST00000582376 CNKSR3Q6P9H4 555 aa11.13□□□□□ -0.63
GGA3-212ENST00000582376 ASCL5Q7RTU5 278 aa11.13□□□□□ -0.63
GGA3-212ENST00000582376 FAM133AQ8N9E0 248 aa11.13□□□□□ -0.63
GGA3-212ENST00000582376 PRPF38AQ8NAV1 312 aaKnown RBP11.13□□□□□ -0.63
GGA3-212ENST00000582376 NSUN3Q9H649 340 aaKnown RBP11.13□□□□□ -0.63
GGA3-212ENST00000582376 KANSL2Q9H9L4 492 aa11.13□□□□□ -0.63
GGA3-212ENST00000582376 GPHNQ9NQX3 736 aaPredicted RBP11.13□□□□□ -0.63
GGA3-212ENST00000582376 PDGFCQ9NRA1 345 aa11.13□□□□□ -0.63
GGA3-212ENST00000582376 TRPC6Q9Y210 931 aa11.13□□□□□ -0.63
GGA3-212ENST00000582376 NOD1Q9Y239 953 aa11.13□□□□□ -0.63
GGA3-212ENST00000582376 KMT2EQ8IZD2 1858 aa11.12□□□□□ -0.63
GGA3-212ENST00000582376 CACNA1HO95180 2353 aa11.12□□□□□ -0.63
GGA3-212ENST00000582376 CACNA1BQ00975 2339 aa11.12□□□□□ -0.63
GGA3-212ENST00000582376 SOWAHBA6NEL2 793 aa11.12□□□□□ -0.63
GGA3-212ENST00000582376 PRR23AA6NEV1 266 aa11.12□□□□□ -0.63
GGA3-212ENST00000582376 USP17L12C9JPN9 530 aa11.12□□□□□ -0.63
GGA3-212ENST00000582376 USP17L21D6R901 530 aa11.12□□□□□ -0.63
GGA3-212ENST00000582376 STXBP3O00186 592 aa11.12□□□□□ -0.63
GGA3-212ENST00000582376 MBTPS2O43462 519 aa11.12□□□□□ -0.63
GGA3-212ENST00000582376 NCK2O43639 380 aa11.12□□□□□ -0.63
GGA3-212ENST00000582376 KRT37O76014 449 aa11.12□□□□□ -0.63
GGA3-212ENST00000582376 MYL3P08590 195 aa11.12□□□□□ -0.63
GGA3-212ENST00000582376 GNAI3P08754 354 aa11.12□□□□□ -0.63
GGA3-212ENST00000582376 ZXDAP98168 799 aa11.12□□□□□ -0.63
GGA3-212ENST00000582376 NBPF20Q3BBV1 942 aa11.12□□□□□ -0.63
GGA3-212ENST00000582376 TAPT1Q6NXT6 567 aa11.12□□□□□ -0.63
GGA3-212ENST00000582376 FAM117BQ6P1L5 589 aa11.12□□□□□ -0.63
GGA3-212ENST00000582376 RPAINQ86UA6 219 aa11.12□□□□□ -0.63
GGA3-212ENST00000582376 FBXO16Q8IX29 292 aaPredicted RBP11.12□□□□□ -0.63
GGA3-212ENST00000582376 CCDC155Q8N6L0 562 aa11.12□□□□□ -0.63
GGA3-212ENST00000582376 NUP88Q99567 741 aaPredicted RBP11.12□□□□□ -0.63
GGA3-212ENST00000582376 MTG1Q9BT17 334 aaPredicted RBP11.12□□□□□ -0.63
GGA3-212ENST00000582376 FSD1Q9BTV5 496 aa11.12□□□□□ -0.63
GGA3-212ENST00000582376 DCP1AQ9NPI6 582 aaPredicted RBP11.12□□□□□ -0.63
GGA3-212ENST00000582376 USP34Q70CQ2 3546 aa11.12□□□□□ -0.63
GGA3-212ENST00000582376 MYH8P13535 1937 aa11.11□□□□□ -0.63
GGA3-212ENST00000582376 CFAP54Q96N23 3096 aa11.11□□□□□ -0.63
GGA3-212ENST00000582376 PLXNA3P51805 1871 aa11.11□□□□□ -0.63
GGA3-212ENST00000582376 ABHD14A-ACY1A0A1B0GW23 586 aa11.11□□□□□ -0.63
GGA3-212ENST00000582376 H0Y858 1186 aa11.11□□□□□ -0.63
GGA3-212ENST00000582376 EFCAB14O75071 495 aa11.11□□□□□ -0.63
GGA3-212ENST00000582376 AVPR2P30518 371 aa11.11□□□□□ -0.63
GGA3-212ENST00000582376 VCPP55072 806 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms