RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 NOBOXO60393 691 aa7.94□□□□□ -1.14
SMCHD1-207ENST00000581711 GREM1O60565 184 aa7.94□□□□□ -1.14
SMCHD1-207ENST00000581711 ITGB3P05106 788 aa7.94□□□□□ -1.14
SMCHD1-207ENST00000581711 GSTM1P09488 218 aa7.94□□□□□ -1.14
SMCHD1-207ENST00000581711 CRKP46108 304 aa7.94□□□□□ -1.14
SMCHD1-207ENST00000581711 PRR5P85299 388 aa7.94□□□□□ -1.14
SMCHD1-207ENST00000581711 DSCC1Q9BVC3 393 aa7.94□□□□□ -1.14
SMCHD1-207ENST00000581711 KRTAP9-8Q9BYQ0 159 aa7.94□□□□□ -1.14
SMCHD1-207ENST00000581711 ANTXR1Q9H6X2 564 aa7.94□□□□□ -1.14
SMCHD1-207ENST00000581711 COPRSQ9NQ92 184 aa7.94□□□□□ -1.14
SMCHD1-207ENST00000581711 PDLIM7Q9NR12 457 aa7.94□□□□□ -1.14
SMCHD1-207ENST00000581711 VTI1BQ9UEU0 232 aa7.94□□□□□ -1.14
SMCHD1-207ENST00000581711 MATN3O15232 486 aa7.93□□□□□ -1.14
SMCHD1-207ENST00000581711 NME1P15531 152 aaKnown RBP7.93□□□□□ -1.14
SMCHD1-207ENST00000581711 MC3RP41968 323 aa7.93□□□□□ -1.14
SMCHD1-207ENST00000581711 ERMP1Q7Z2K6 904 aa7.93□□□□□ -1.14
SMCHD1-207ENST00000581711 CARFQ8N187 725 aa7.93□□□□□ -1.14
SMCHD1-207ENST00000581711 LNPKQ9C0E8 428 aa7.93□□□□□ -1.14
SMCHD1-207ENST00000581711 F8W031 263 aaPredicted RBP7.92□□□□□ -1.14
SMCHD1-207ENST00000581711 TNFRSF10CO14798 259 aa7.92□□□□□ -1.14
SMCHD1-207ENST00000581711 SUV39H1O43463 412 aa7.92□□□□□ -1.14
SMCHD1-207ENST00000581711 NCAM1P13591 858 aa7.92□□□□□ -1.14
SMCHD1-207ENST00000581711 EIF4A3P38919 411 aaKnown RBP7.92□□□□□ -1.14
SMCHD1-207ENST00000581711 GJA9P57773 515 aa7.92□□□□□ -1.14
SMCHD1-207ENST00000581711 CLCQ05315 142 aa7.92□□□□□ -1.14
SMCHD1-207ENST00000581711 CYP2R1Q6VVX0 501 aa7.92□□□□□ -1.14
SMCHD1-207ENST00000581711 ZBTB7CA1YPR0 619 aa7.91□□□□□ -1.14
SMCHD1-207ENST00000581711 SHOXO15266 292 aa7.91□□□□□ -1.14
SMCHD1-207ENST00000581711 ASGR2P07307 311 aa7.91□□□□□ -1.14
SMCHD1-207ENST00000581711 CWF19L1Q69YN2 538 aaKnown RBP7.91□□□□□ -1.14
SMCHD1-207ENST00000581711 GK5Q6ZS86 529 aa7.91□□□□□ -1.14
SMCHD1-207ENST00000581711 RBM15Q96T37 977 aaKnown RBP eCLIP7.91□□□□□ -1.14
SMCHD1-207ENST00000581711 MRS2Q9HD23 443 aa7.91□□□□□ -1.14
SMCHD1-207ENST00000581711 MEIS3P2A8K0S8 358 aa7.9□□□□□ -1.14
SMCHD1-207ENST00000581711 FGF10O15520 208 aaPredicted RBP7.9□□□□□ -1.14
SMCHD1-207ENST00000581711 TACR1P25103 407 aa7.9□□□□□ -1.14
SMCHD1-207ENST00000581711 B3GNT8Q7Z7M8 397 aa7.9□□□□□ -1.14
SMCHD1-207ENST00000581711 C7orf61Q8IZ16 206 aa7.9□□□□□ -1.14
SMCHD1-207ENST00000581711 REXO1Q8N1G1 1221 aaKnown RBP7.9□□□□□ -1.14
SMCHD1-207ENST00000581711 SRRTQ9BXP5 876 aaKnown RBP7.9□□□□□ -1.14
SMCHD1-207ENST00000581711 KRTAP3-1Q9BYR8 98 aa7.9□□□□□ -1.14
SMCHD1-207ENST00000581711 DBR1Q9UK59 544 aaKnown RBP7.9□□□□□ -1.14
SMCHD1-207ENST00000581711 H0Y8X5 98 aa7.89□□□□□ -1.15
SMCHD1-207ENST00000581711 CORO7P57737 925 aa7.89□□□□□ -1.15
SMCHD1-207ENST00000581711 SEZ6Q53EL9 994 aa7.89□□□□□ -1.15
SMCHD1-207ENST00000581711 FBXO33Q7Z6M2 555 aa7.89□□□□□ -1.15
SMCHD1-207ENST00000581711 ZNF296Q8WUU4 475 aaPredicted RBP7.89□□□□□ -1.15
SMCHD1-207ENST00000581711 SLC9A7Q96T83 725 aa7.89□□□□□ -1.15
SMCHD1-207ENST00000581711 SUCOQ9UBS9 1254 aaKnown RBP7.89□□□□□ -1.15
SMCHD1-207ENST00000581711 C9IYK1 514 aa7.88□□□□□ -1.15
SMCHD1-207ENST00000581711 LRRFIP1Q32MZ4 808 aaKnown RBP7.88□□□□□ -1.15
SMCHD1-207ENST00000581711 SLC16A11Q8NCK7 471 aa7.88□□□□□ -1.15
SMCHD1-207ENST00000581711 ALG3Q92685 438 aa7.88□□□□□ -1.15
SMCHD1-207ENST00000581711 SRRDQ9UH36 339 aa7.88□□□□□ -1.15
SMCHD1-207ENST00000581711 C1QTNF3-AMACRE9PGA6 284 aa7.87□□□□□ -1.15
SMCHD1-207ENST00000581711 CPZQ66K79 652 aa7.87□□□□□ -1.15
SMCHD1-207ENST00000581711 CCDC144CPQ8IYA2 1237 aa7.87□□□□□ -1.15
SMCHD1-207ENST00000581711 UBP1Q9NZI7 540 aa7.87□□□□□ -1.15
SMCHD1-207ENST00000581711 PMLP29590 882 aa7.86□□□□□ -1.15
SMCHD1-207ENST00000581711 MCM4P33991 863 aa7.86□□□□□ -1.15
SMCHD1-207ENST00000581711 CCDC27Q2M243 656 aa7.86□□□□□ -1.15
SMCHD1-207ENST00000581711 ZNF761Q86XN6 746 aaPredicted RBP7.86□□□□□ -1.15
SMCHD1-207ENST00000581711 DHRS1Q96LJ7 313 aa7.86□□□□□ -1.15
SMCHD1-207ENST00000581711 C1QTNF3Q9BXJ4 246 aa7.86□□□□□ -1.15
SMCHD1-207ENST00000581711 NTMQ9P121 344 aa7.86□□□□□ -1.15
SMCHD1-207ENST00000581711 FAM86C2PA6NEL3 165 aa7.85□□□□□ -1.15
SMCHD1-207ENST00000581711 FSHBP01225 129 aa7.85□□□□□ -1.15
SMCHD1-207ENST00000581711 GLI4P10075 376 aa7.85□□□□□ -1.15
SMCHD1-207ENST00000581711 ZNF20P17024 532 aa7.85□□□□□ -1.15
SMCHD1-207ENST00000581711 SARSP49591 514 aaKnown RBP7.85□□□□□ -1.15
SMCHD1-207ENST00000581711 ZNF165P49910 485 aa7.85□□□□□ -1.15
SMCHD1-207ENST00000581711 DNAJC14Q6Y2X3 702 aaPredicted RBP7.85□□□□□ -1.15
SMCHD1-207ENST00000581711 NLGN2Q8NFZ4 835 aa7.85□□□□□ -1.15
SMCHD1-207ENST00000581711 C8orf49Q96NF6 230 aa7.85□□□□□ -1.15
SMCHD1-207ENST00000581711 PTCHD1Q96NR3 888 aa7.85□□□□□ -1.15
SMCHD1-207ENST00000581711 BCAS3Q9H6U6 928 aa7.85□□□□□ -1.15
SMCHD1-207ENST00000581711 L1CAMP32004 1257 aa7.84□□□□□ -1.15
SMCHD1-207ENST00000581711 NOP2P46087 812 aaKnown RBP7.84□□□□□ -1.15
SMCHD1-207ENST00000581711 APOBRQ0VD83 1088 aa7.84□□□□□ -1.15
SMCHD1-207ENST00000581711 USP48Q86UV5 1035 aa7.84□□□□□ -1.15
SMCHD1-207ENST00000581711 TTC9BQ8N6N2 239 aa7.84□□□□□ -1.15
SMCHD1-207ENST00000581711 SMARCC2Q8TAQ2 1214 aa7.84□□□□□ -1.15
SMCHD1-207ENST00000581711 TSPAN17Q96FV3 270 aa7.84□□□□□ -1.15
SMCHD1-207ENST00000581711 LOXL4Q96JB6 756 aa7.84□□□□□ -1.15
SMCHD1-207ENST00000581711 SAMD11Q96NU1 681 aa7.84□□□□□ -1.15
SMCHD1-207ENST00000581711 FCRL3Q96P31 734 aaPredicted RBP7.84□□□□□ -1.15
SMCHD1-207ENST00000581711 NOX5Q96PH1 765 aa7.84□□□□□ -1.15
SMCHD1-207ENST00000581711 RXFP1Q9HBX9 757 aa7.84□□□□□ -1.15
SMCHD1-207ENST00000581711 SPATA6Q9NWH7 488 aaPredicted RBP7.84□□□□□ -1.15
SMCHD1-207ENST00000581711 ADAMTS1Q9UHI8 967 aa7.84□□□□□ -1.15
SMCHD1-207ENST00000581711 TBC1D8O95759 1140 aa7.83□□□□□ -1.16
SMCHD1-207ENST00000581711 ACRP10323 421 aa7.83□□□□□ -1.16
SMCHD1-207ENST00000581711 ZNF445P59923 1031 aa7.83□□□□□ -1.16
SMCHD1-207ENST00000581711 TAGLNQ01995 201 aaKnown RBP7.83□□□□□ -1.16
SMCHD1-207ENST00000581711 NOL9Q5SY16 702 aaKnown RBP7.83□□□□□ -1.16
SMCHD1-207ENST00000581711 TDRD10Q5VZ19 366 aaKnown RBP7.83□□□□□ -1.16
SMCHD1-207ENST00000581711 DCAF15Q66K64 600 aa7.83□□□□□ -1.16
SMCHD1-207ENST00000581711 BRF1Q92994 677 aa7.83□□□□□ -1.16
SMCHD1-207ENST00000581711 PLATP00750 562 aa7.82□□□□□ -1.16
SMCHD1-207ENST00000581711 PMS1P54277 932 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms