RNA–Protein interactions for RNA: ENST00000581705.5

SNX11-209, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 1,426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-209ENST00000581705 SHCBP1Q8NEM2 672 aa23.78■■□□□ 1.4
SNX11-209ENST00000581705 NUP133Q8WUM0 1156 aa23.78■■□□□ 1.4
SNX11-209ENST00000581705 FLRT1Q9NZU1 646 aa23.78■■□□□ 1.4
SNX11-209ENST00000581705 RANBP2P49792 3224 aaKnown RBP23.78■■□□□ 1.4
SNX11-209ENST00000581705 STRNO43815 780 aa23.77■■□□□ 1.4
SNX11-209ENST00000581705 CDC27P30260 824 aa23.77■■□□□ 1.4
SNX11-209ENST00000581705 CCND3P30281 292 aaPredicted RBP23.77■■□□□ 1.4
SNX11-209ENST00000581705 MKL1Q969V6 931 aa23.77■■□□□ 1.4
SNX11-209ENST00000581705 ATG4CQ96DT6 458 aa23.77■■□□□ 1.4
SNX11-209ENST00000581705 MYL10Q9BUA6 226 aa23.77■■□□□ 1.4
SNX11-209ENST00000581705 GOPCQ9HD26 462 aa23.77■■□□□ 1.4
SNX11-209ENST00000581705 EVI5O60447 810 aa23.76■■□□□ 1.39
SNX11-209ENST00000581705 JAK2O60674 1132 aa23.76■■□□□ 1.39
SNX11-209ENST00000581705 ERCC3P19447 782 aa23.76■■□□□ 1.39
SNX11-209ENST00000581705 ADD1P35611 737 aaKnown RBP23.76■■□□□ 1.39
SNX11-209ENST00000581705 GRM4Q14833 912 aa23.76■■□□□ 1.39
SNX11-209ENST00000581705 MFSD14CQ5VZR4 134 aa23.76■■□□□ 1.39
SNX11-209ENST00000581705 LHX8Q68G74 356 aa23.76■■□□□ 1.39
SNX11-209ENST00000581705 LZTS2Q9BRK4 669 aa23.76■■□□□ 1.39
SNX11-209ENST00000581705 TRIOBPQ9H2D6 2365 aa23.76■■□□□ 1.39
SNX11-209ENST00000581705 STX6O43752 255 aa23.76■■□□□ 1.39
SNX11-209ENST00000581705 BRD1O95696 1058 aa23.76■■□□□ 1.39
SNX11-209ENST00000581705 IGHA2P01877 340 aa23.76■■□□□ 1.39
SNX11-209ENST00000581705 RXRAP19793 462 aa23.76■■□□□ 1.39
SNX11-209ENST00000581705 SYT1P21579 422 aa23.76■■□□□ 1.39
SNX11-209ENST00000581705 LARP1BQ659C4 914 aaKnown RBP23.76■■□□□ 1.39
SNX11-209ENST00000581705 TRIM22Q8IYM9 498 aa23.76■■□□□ 1.39
SNX11-209ENST00000581705 NPLOC4Q8TAT6 608 aa23.76■■□□□ 1.39
SNX11-209ENST00000581705 WASF1Q92558 559 aa23.76■■□□□ 1.39
SNX11-209ENST00000581705 MROH8Q9H579 483 aa23.76■■□□□ 1.39
SNX11-209ENST00000581705 RBM27Q9P2N5 1060 aaKnown RBP23.76■■□□□ 1.39
SNX11-209ENST00000581705 ADAMTS5Q9UNA0 930 aa23.76■■□□□ 1.39
SNX11-209ENST00000581705 SMARCA1P28370 1054 aa23.75■■□□□ 1.39
SNX11-209ENST00000581705 ADORA2AP29274 412 aa23.75■■□□□ 1.39
SNX11-209ENST00000581705 CHRDL2Q6WN34 429 aa23.75■■□□□ 1.39
SNX11-209ENST00000581705 RAB11FIP4Q86YS3 637 aa23.75■■□□□ 1.39
SNX11-209ENST00000581705 RNF26Q9BY78 433 aaPredicted RBP23.75■■□□□ 1.39
SNX11-209ENST00000581705 FBXO28Q9NVF7 368 aa23.75■■□□□ 1.39
SNX11-209ENST00000581705 PLS1Q14651 629 aa23.74■■□□□ 1.39
SNX11-209ENST00000581705 TMEM132BQ14DG7 1078 aa23.74■■□□□ 1.39
SNX11-209ENST00000581705 TMTC3Q6ZXV5 915 aa23.74■■□□□ 1.39
SNX11-209ENST00000581705 ORC3Q9UBD5 711 aaPredicted RBP23.74■■□□□ 1.39
SNX11-209ENST00000581705 PARP14Q460N5 1801 aa23.73■■□□□ 1.39
SNX11-209ENST00000581705 ZNF236Q9UL36 1845 aa23.73■■□□□ 1.39
SNX11-209ENST00000581705 MYH4Q9Y623 1939 aa23.73■■□□□ 1.39
SNX11-209ENST00000581705 SNHG28P0DPA3 235 aa23.73■■□□□ 1.39
SNX11-209ENST00000581705 FXR1P51114 621 aaKnown RBP eCLIP23.73■■□□□ 1.39
SNX11-209ENST00000581705 SSRP1Q08945 709 aaKnown RBP23.73■■□□□ 1.39
SNX11-209ENST00000581705 DPP9Q86TI2 863 aa23.73■■□□□ 1.39
SNX11-209ENST00000581705 CCDC144CPQ8IYA2 1237 aa23.73■■□□□ 1.39
SNX11-209ENST00000581705 ABRAQ8N0Z2 381 aa23.73■■□□□ 1.39
SNX11-209ENST00000581705 C11orf49Q9H6J7 331 aa23.73■■□□□ 1.39
SNX11-209ENST00000581705 PPP1R9AQ9ULJ8 1098 aa23.73■■□□□ 1.39
SNX11-209ENST00000581705 FDPSP14324 419 aaKnown RBP23.72■■□□□ 1.39
SNX11-209ENST00000581705 FAM83BQ5T0W9 1011 aa23.72■■□□□ 1.39
SNX11-209ENST00000581705 SAMD1Q6SPF0 538 aaPredicted RBP23.72■■□□□ 1.39
SNX11-209ENST00000581705 CLEC17AQ6ZS10 378 aa23.72■■□□□ 1.39
SNX11-209ENST00000581705 NCAPG2Q86XI2 1143 aa23.72■■□□□ 1.39
SNX11-209ENST00000581705 DDX11Q96FC9 970 aa23.72■■□□□ 1.39
SNX11-209ENST00000581705 PRO3102Q9H379 93 aa23.72■■□□□ 1.39
SNX11-209ENST00000581705 CLIP2Q9UDT6 1046 aa23.72■■□□□ 1.39
SNX11-209ENST00000581705 PALM3A6NDB9 673 aaPredicted RBP23.71■■□□□ 1.39
SNX11-209ENST00000581705 DEXIO95424 95 aa23.71■■□□□ 1.39
SNX11-209ENST00000581705 SLC25A27O95847 323 aa23.71■■□□□ 1.39
SNX11-209ENST00000581705 CYP2C19P33261 490 aa23.71■■□□□ 1.39
SNX11-209ENST00000581705 FUT2Q10981 343 aa23.71■■□□□ 1.39
SNX11-209ENST00000581705 ASPRV1Q53RT3 343 aa23.71■■□□□ 1.39
SNX11-209ENST00000581705 OLFML2BQ68BL8 750 aa23.71■■□□□ 1.39
SNX11-209ENST00000581705 ALPK3Q96L96 1907 aa23.7■■□□□ 1.39
SNX11-209ENST00000581705 F5H6K3 240 aa23.7■■□□□ 1.38
SNX11-209ENST00000581705 VWA5AO00534 786 aa23.7■■□□□ 1.38
SNX11-209ENST00000581705 PRPF3O43395 683 aaKnown RBP23.7■■□□□ 1.38
SNX11-209ENST00000581705 RAD21O60216 631 aa23.7■■□□□ 1.38
SNX11-209ENST00000581705 COBLO75128 1261 aa23.7■■□□□ 1.38
SNX11-209ENST00000581705 PARP1P09874 1014 aaKnown RBP23.7■■□□□ 1.38
SNX11-209ENST00000581705 ZSCAN22P10073 491 aaPredicted RBP23.7■■□□□ 1.38
SNX11-209ENST00000581705 COL6A1P12109 1028 aa23.7■■□□□ 1.38
SNX11-209ENST00000581705 KLRC3Q07444 240 aa23.7■■□□□ 1.38
SNX11-209ENST00000581705 GMCL1P1Q8NEA9 526 aa23.7■■□□□ 1.38
SNX11-209ENST00000581705 MAD2L2Q9UI95 211 aa23.7■■□□□ 1.38
SNX11-209ENST00000581705 MTMR6Q9Y217 621 aa23.7■■□□□ 1.38
SNX11-209ENST00000581705 ZDHHC9Q9Y397 364 aa23.7■■□□□ 1.38
SNX11-209ENST00000581705 NDUFB10O96000 172 aa23.69■■□□□ 1.38
SNX11-209ENST00000581705 AKAP17AQ02040 695 aaKnown RBP23.69■■□□□ 1.38
SNX11-209ENST00000581705 GPATCH4Q5T3I0 446 aaKnown RBP23.69■■□□□ 1.38
SNX11-209ENST00000581705 RIOX2Q8IUF8 465 aa23.69■■□□□ 1.38
SNX11-209ENST00000581705 REPS2Q8NFH8 660 aa23.69■■□□□ 1.38
SNX11-209ENST00000581705 SLC5A4Q9NY91 659 aa23.69■■□□□ 1.38
SNX11-209ENST00000581705 PCDH10Q9P2E7 1040 aa23.69■■□□□ 1.38
SNX11-209ENST00000581705 DDX20Q9UHI6 824 aaKnown RBP23.69■■□□□ 1.38
SNX11-209ENST00000581705 ATP6V1DQ9Y5K8 247 aa23.69■■□□□ 1.38
SNX11-209ENST00000581705 PFASO15067 1338 aa23.69■■□□□ 1.38
SNX11-209ENST00000581705 MSCO60682 206 aa23.68■■□□□ 1.38
SNX11-209ENST00000581705 PDHBP11177 359 aa23.68■■□□□ 1.38
SNX11-209ENST00000581705 FCER1AP12319 257 aa23.68■■□□□ 1.38
SNX11-209ENST00000581705 PKP1Q13835 747 aa23.68■■□□□ 1.38
SNX11-209ENST00000581705 FAM177A1Q8N128 213 aaPredicted RBP23.68■■□□□ 1.38
SNX11-209ENST00000581705 TRPV1Q8NER1 839 aa23.68■■□□□ 1.38
SNX11-209ENST00000581705 DCAF4Q8WV16 495 aa23.68■■□□□ 1.38
SNX11-209ENST00000581705 TNPO1Q92973 898 aaKnown RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms