RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 PNMA2Q9UL42 364 aa24.61■■□□□ 1.53
CCDC42-203ENST00000581598 ADCY6O43306 1168 aa24.6■■□□□ 1.53
CCDC42-203ENST00000581598 GJA9P57773 515 aa24.6■■□□□ 1.53
CCDC42-203ENST00000581598 SNAP25P60880 206 aa24.6■■□□□ 1.53
CCDC42-203ENST00000581598 MUM1L1Q5H9M0 696 aa24.6■■□□□ 1.53
CCDC42-203ENST00000581598 DGKHQ86XP1 1220 aa24.6■■□□□ 1.53
CCDC42-203ENST00000581598 PCSK9Q8NBP7 692 aaKnown RBP24.6■■□□□ 1.53
CCDC42-203ENST00000581598 SPC25Q9HBM1 224 aa24.6■■□□□ 1.53
CCDC42-203ENST00000581598 NEDD4P46934 1319 aa24.6■■□□□ 1.53
CCDC42-203ENST00000581598 SLC16A2P36021 539 aa24.59■■□□□ 1.53
CCDC42-203ENST00000581598 ZNF543Q08ER8 600 aa24.59■■□□□ 1.53
CCDC42-203ENST00000581598 KCNA10Q16322 511 aa24.59■■□□□ 1.53
CCDC42-203ENST00000581598 CCDC178Q5BJE1 867 aa24.59■■□□□ 1.53
CCDC42-203ENST00000581598 ANKRD33Q7Z3H0 272 aa24.59■■□□□ 1.53
CCDC42-203ENST00000581598 TOX2Q96NM4 488 aa24.59■■□□□ 1.53
CCDC42-203ENST00000581598 PRDM5Q9NQX1 630 aaPredicted RBP24.59■■□□□ 1.53
CCDC42-203ENST00000581598 STARD7Q9NQZ5 370 aa24.59■■□□□ 1.53
CCDC42-203ENST00000581598 LOC102724159A0A0B4J2E5 919 aa24.58■■□□□ 1.53
CCDC42-203ENST00000581598 TRIM43BA6NCK2 446 aa24.58■■□□□ 1.53
CCDC42-203ENST00000581598 PWP2Q15269 919 aaKnown RBP24.58■■□□□ 1.53
CCDC42-203ENST00000581598 MORC4Q8TE76 937 aa24.58■■□□□ 1.53
CCDC42-203ENST00000581598 TRIM43Q96BQ3 446 aaPredicted RBP24.58■■□□□ 1.53
CCDC42-203ENST00000581598 ASTN1O14525 1302 aa24.58■■□□□ 1.52
CCDC42-203ENST00000581598 ELP1O95163 1332 aa24.58■■□□□ 1.52
CCDC42-203ENST00000581598 FRMPD2Q68DX3 1309 aaPredicted RBP24.58■■□□□ 1.52
CCDC42-203ENST00000581598 MYADML2A6NDP7 307 aa24.57■■□□□ 1.52
CCDC42-203ENST00000581598 CLTBP09497 229 aa24.57■■□□□ 1.52
CCDC42-203ENST00000581598 C6orf222P0C671 652 aaPredicted RBP24.57■■□□□ 1.52
CCDC42-203ENST00000581598 SH3RF1Q7Z6J0 888 aa24.57■■□□□ 1.52
CCDC42-203ENST00000581598 ANKS1AQ92625 1134 aa24.57■■□□□ 1.52
CCDC42-203ENST00000581598 GPCPD1Q9NPB8 672 aa24.57■■□□□ 1.52
CCDC42-203ENST00000581598 CTNNA3Q9UI47 895 aa24.57■■□□□ 1.52
CCDC42-203ENST00000581598 KIAA0355O15063 1070 aa24.56■■□□□ 1.52
CCDC42-203ENST00000581598 GPATCH4Q5T3I0 446 aaKnown RBP24.56■■□□□ 1.52
CCDC42-203ENST00000581598 NSMFQ6X4W1 530 aa24.56■■□□□ 1.52
CCDC42-203ENST00000581598 CENPQQ7L2Z9 268 aaPredicted RBP24.56■■□□□ 1.52
CCDC42-203ENST00000581598 IQCA1Q86XH1 822 aa24.56■■□□□ 1.52
CCDC42-203ENST00000581598 BADQ92934 168 aa24.56■■□□□ 1.52
CCDC42-203ENST00000581598 GLT1D1Q96MS3 346 aa24.56■■□□□ 1.52
CCDC42-203ENST00000581598 WDR19Q8NEZ3 1342 aa24.56■■□□□ 1.52
CCDC42-203ENST00000581598 CTAGE5O15320 804 aa24.55■■□□□ 1.52
CCDC42-203ENST00000581598 ASGR1P07306 291 aa24.55■■□□□ 1.52
CCDC42-203ENST00000581598 PDE4AP27815 886 aa24.55■■□□□ 1.52
CCDC42-203ENST00000581598 TNFAIP2Q03169 654 aa24.55■■□□□ 1.52
CCDC42-203ENST00000581598 IMMTQ16891 758 aaKnown RBP24.55■■□□□ 1.52
CCDC42-203ENST00000581598 ADD3Q9UEY8 706 aaKnown RBP24.55■■□□□ 1.52
CCDC42-203ENST00000581598 GNEQ9Y223 722 aaKnown RBP24.55■■□□□ 1.52
CCDC42-203ENST00000581598 KDM4AO75164 1064 aa24.54■■□□□ 1.52
CCDC42-203ENST00000581598 TTC22Q5TAA0 569 aa24.54■■□□□ 1.52
CCDC42-203ENST00000581598 IQSEC1Q6DN90 963 aa24.54■■□□□ 1.52
CCDC42-203ENST00000581598 Q9Y3F1 56 aa24.54■■□□□ 1.52
CCDC42-203ENST00000581598 MROH7Q68CQ1 1323 aa24.54■■□□□ 1.52
CCDC42-203ENST00000581598 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.53■■□□□ 1.52
CCDC42-203ENST00000581598 DCDC2CA8MYV0 355 aa24.53■■□□□ 1.52
CCDC42-203ENST00000581598 NFIBO00712 420 aa24.53■■□□□ 1.52
CCDC42-203ENST00000581598 PQBP1O60828 265 aaKnown RBP24.53■■□□□ 1.52
CCDC42-203ENST00000581598 CDK7P50613 346 aa24.53■■□□□ 1.52
CCDC42-203ENST00000581598 GNASQ5JWF2 1037 aa24.53■■□□□ 1.52
CCDC42-203ENST00000581598 DEFB123Q8N688 67 aa24.53■■□□□ 1.52
CCDC42-203ENST00000581598 CLEC4DQ8WXI8 215 aa24.53■■□□□ 1.52
CCDC42-203ENST00000581598 ZKSCAN3Q9BRR0 538 aa24.53■■□□□ 1.52
CCDC42-203ENST00000581598 VTA1Q9NP79 307 aa24.53■■□□□ 1.52
CCDC42-203ENST00000581598 RAD50Q92878 1312 aa24.53■■□□□ 1.52
CCDC42-203ENST00000581598 B4E1Z4 1266 aa24.52■■□□□ 1.52
CCDC42-203ENST00000581598 GSPT1P15170 499 aaKnown RBP24.52■■□□□ 1.52
CCDC42-203ENST00000581598 IRX5P78411 483 aaPredicted RBP24.52■■□□□ 1.52
CCDC42-203ENST00000581598 FAAP100Q0VG06 881 aa24.52■■□□□ 1.52
CCDC42-203ENST00000581598 BAATQ14032 418 aaPredicted RBP24.52■■□□□ 1.52
CCDC42-203ENST00000581598 FAM109BQ6ICB4 259 aaPredicted RBP24.52■■□□□ 1.52
CCDC42-203ENST00000581598 TAPT1Q6NXT6 567 aa24.52■■□□□ 1.52
CCDC42-203ENST00000581598 PNMA1Q8ND90 353 aa24.52■■□□□ 1.52
CCDC42-203ENST00000581598 ZSCAN10Q96SZ4 725 aaPredicted RBP24.52■■□□□ 1.52
CCDC42-203ENST00000581598 KRT23Q9C075 422 aa24.52■■□□□ 1.52
CCDC42-203ENST00000581598 MAF1Q9H063 256 aa24.52■■□□□ 1.52
CCDC42-203ENST00000581598 CNNM2Q9H8M5 875 aa24.52■■□□□ 1.52
CCDC42-203ENST00000581598 A0A0U1RQG5 324 aaPredicted RBP24.51■■□□□ 1.51
CCDC42-203ENST00000581598 ITGB8P26012 769 aa24.51■■□□□ 1.51
CCDC42-203ENST00000581598 ALDH5A1P51649 535 aaPredicted RBP24.51■■□□□ 1.51
CCDC42-203ENST00000581598 SHHQ15465 462 aa24.51■■□□□ 1.51
CCDC42-203ENST00000581598 TLK2Q86UE8 772 aa24.51■■□□□ 1.51
CCDC42-203ENST00000581598 IL25Q9H293 177 aa24.51■■□□□ 1.51
CCDC42-203ENST00000581598 TMEM39AQ9NV64 488 aa24.51■■□□□ 1.51
CCDC42-203ENST00000581598 ZSWIM5Q9P217 1185 aa24.51■■□□□ 1.51
CCDC42-203ENST00000581598 A0A0C4DFX4 3053 aa24.51■■□□□ 1.51
CCDC42-203ENST00000581598 ARVCFO00192 962 aa24.5■■□□□ 1.51
CCDC42-203ENST00000581598 CABYRO75952 493 aa24.5■■□□□ 1.51
CCDC42-203ENST00000581598 RAG1P15918 1043 aa24.5■■□□□ 1.51
CCDC42-203ENST00000581598 SMPD1P17405 629 aa24.5■■□□□ 1.51
CCDC42-203ENST00000581598 ENAHQ8N8S7 591 aaPredicted RBP24.5■■□□□ 1.51
CCDC42-203ENST00000581598 KAT14Q9H8E8 782 aa24.5■■□□□ 1.51
CCDC42-203ENST00000581598 MTMR10Q9NXD2 777 aa24.5■■□□□ 1.51
CCDC42-203ENST00000581598 C9orf50Q5SZB4 431 aa24.49■■□□□ 1.51
CCDC42-203ENST00000581598 RNF207Q6ZRF8 634 aa24.49■■□□□ 1.51
CCDC42-203ENST00000581598 NOL8Q76FK4 1167 aaKnown RBP24.49■■□□□ 1.51
CCDC42-203ENST00000581598 FBXO16Q8IX29 292 aaPredicted RBP24.49■■□□□ 1.51
CCDC42-203ENST00000581598 SLC17A8Q8NDX2 589 aa24.49■■□□□ 1.51
CCDC42-203ENST00000581598 RGS22Q8NE09 1264 aa24.49■■□□□ 1.51
CCDC42-203ENST00000581598 PURBQ96QR8 312 aaKnown RBP24.49■■□□□ 1.51
CCDC42-203ENST00000581598 SEZ6LQ9BYH1 1024 aa24.49■■□□□ 1.51
CCDC42-203ENST00000581598 AP5M1Q9H0R1 490 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms