RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 SRGAP3O43295 1099 aa5.79□□□□□ -1.48
SMG8-205ENST00000580798 CYBBP04839 570 aa5.79□□□□□ -1.48
SMG8-205ENST00000580798 VAV1P15498 845 aa5.79□□□□□ -1.48
SMG8-205ENST00000580798 MC3RP41968 323 aa5.79□□□□□ -1.48
SMG8-205ENST00000580798 CRTC3Q6UUV7 619 aa5.79□□□□□ -1.48
SMG8-205ENST00000580798 C1QTNF3Q9BXJ4 246 aa5.79□□□□□ -1.48
SMG8-205ENST00000580798 SCAND2PQ9GZW5 306 aaPredicted RBP5.79□□□□□ -1.48
SMG8-205ENST00000580798 GMIPQ9P107 970 aa5.79□□□□□ -1.48
SMG8-205ENST00000580798 A0A1W2PQ27 194 aa5.78□□□□□ -1.48
SMG8-205ENST00000580798 A0A1W2PQ64 194 aa5.78□□□□□ -1.48
SMG8-205ENST00000580798 A0A1W2PQC6 194 aa5.78□□□□□ -1.48
SMG8-205ENST00000580798 A0A1W2PQD8 194 aa5.78□□□□□ -1.48
SMG8-205ENST00000580798 CLEC3AO75596 197 aa5.78□□□□□ -1.48
SMG8-205ENST00000580798 ZNF20P17024 532 aa5.78□□□□□ -1.48
SMG8-205ENST00000580798 GJA9P57773 515 aa5.78□□□□□ -1.48
SMG8-205ENST00000580798 RAD51AP2Q09MP3 1159 aa5.78□□□□□ -1.48
SMG8-205ENST00000580798 CWF19L2Q2TBE0 894 aaKnown RBP5.78□□□□□ -1.48
SMG8-205ENST00000580798 RTP2Q5QGT7 225 aa5.78□□□□□ -1.48
SMG8-205ENST00000580798 OVOS1Q6IE37 1185 aa5.78□□□□□ -1.48
SMG8-205ENST00000580798 FBXL19Q6PCT2 694 aa5.78□□□□□ -1.48
SMG8-205ENST00000580798 C8orf49Q96NF6 230 aa5.78□□□□□ -1.48
SMG8-205ENST00000580798 LRRC3Q9BY71 257 aa5.78□□□□□ -1.48
SMG8-205ENST00000580798 RNF38Q9H0F5 515 aa5.78□□□□□ -1.48
SMG8-205ENST00000580798 BRMS1Q9HCU9 246 aa5.78□□□□□ -1.48
SMG8-205ENST00000580798 FAN1Q9Y2M0 1017 aa5.78□□□□□ -1.48
SMG8-205ENST00000580798 PCDHB14Q9Y5E9 798 aa5.78□□□□□ -1.48
SMG8-205ENST00000580798 ZNF326Q5BKZ1 582 aaKnown RBP5.77□□□□□ -1.49
SMG8-205ENST00000580798 CDCP2Q5VXM1 449 aa5.77□□□□□ -1.49
SMG8-205ENST00000580798 KCNQ5Q9NR82 932 aa5.77□□□□□ -1.49
SMG8-205ENST00000580798 BCCIPQ9P287 314 aaKnown RBP eCLIP5.77□□□□□ -1.49
SMG8-205ENST00000580798 NCAM1P13591 858 aa5.76□□□□□ -1.49
SMG8-205ENST00000580798 CRKP46108 304 aa5.76□□□□□ -1.49
SMG8-205ENST00000580798 HMGA2P52926 109 aa5.76□□□□□ -1.49
SMG8-205ENST00000580798 PRR5P85299 388 aa5.76□□□□□ -1.49
SMG8-205ENST00000580798 HLA-DQA1Q5Y7H0 255 aa5.76□□□□□ -1.49
SMG8-205ENST00000580798 TTC9BQ8N6N2 239 aa5.76□□□□□ -1.49
SMG8-205ENST00000580798 LOXL4Q96JB6 756 aa5.76□□□□□ -1.49
SMG8-205ENST00000580798 SAMD11Q96NU1 681 aa5.76□□□□□ -1.49
SMG8-205ENST00000580798 CNNM2Q9H8M5 875 aa5.76□□□□□ -1.49
SMG8-205ENST00000580798 SUPT16HQ9Y5B9 1047 aaKnown RBP5.76□□□□□ -1.49
SMG8-205ENST00000580798 PCDHB12Q9Y5F1 795 aa5.76□□□□□ -1.49
SMG8-205ENST00000580798 F8W031 263 aaPredicted RBP5.75□□□□□ -1.49
SMG8-205ENST00000580798 GREM1O60565 184 aa5.75□□□□□ -1.49
SMG8-205ENST00000580798 ATE1O95260 518 aa5.75□□□□□ -1.49
SMG8-205ENST00000580798 ASGR2P07307 311 aa5.75□□□□□ -1.49
SMG8-205ENST00000580798 C6P13671 934 aa5.75□□□□□ -1.49
SMG8-205ENST00000580798 EIF4A3P38919 411 aaKnown RBP5.75□□□□□ -1.49
SMG8-205ENST00000580798 CCDC27Q2M243 656 aa5.75□□□□□ -1.49
SMG8-205ENST00000580798 BICRALQ6AI39 1079 aa5.75□□□□□ -1.49
SMG8-205ENST00000580798 TMEM192Q8IY95 271 aa5.75□□□□□ -1.49
SMG8-205ENST00000580798 ATG4CQ96DT6 458 aa5.75□□□□□ -1.49
SMG8-205ENST00000580798 MKRN2Q9H000 416 aaKnown RBP5.75□□□□□ -1.49
SMG8-205ENST00000580798 PDLIM7Q9NR12 457 aa5.75□□□□□ -1.49
SMG8-205ENST00000580798 FBXL21Q9UKT6 434 aa5.75□□□□□ -1.49
SMG8-205ENST00000580798 A0A1W2PQJ5 194 aa5.74□□□□□ -1.49
SMG8-205ENST00000580798 SLPIP03973 132 aa5.74□□□□□ -1.49
SMG8-205ENST00000580798 GSTM1P09488 218 aa5.74□□□□□ -1.49
SMG8-205ENST00000580798 ERCC3P19447 782 aa5.74□□□□□ -1.49
SMG8-205ENST00000580798 ITGAEP38570 1179 aa5.74□□□□□ -1.49
SMG8-205ENST00000580798 CCNFP41002 786 aa5.74□□□□□ -1.49
SMG8-205ENST00000580798 B3GNT8Q7Z7M8 397 aa5.74□□□□□ -1.49
SMG8-205ENST00000580798 ZNF761Q86XN6 746 aaPredicted RBP5.74□□□□□ -1.49
SMG8-205ENST00000580798 JAMLQ86YT9 394 aa5.74□□□□□ -1.49
SMG8-205ENST00000580798 DHX37Q8IY37 1157 aaKnown RBP5.74□□□□□ -1.49
SMG8-205ENST00000580798 NAT16Q8N8M0 369 aa5.74□□□□□ -1.49
SMG8-205ENST00000580798 ZNF296Q8WUU4 475 aaPredicted RBP5.74□□□□□ -1.49
SMG8-205ENST00000580798 MENTQ9BUN1 341 aa5.74□□□□□ -1.49
SMG8-205ENST00000580798 SLC12A9Q9BXP2 914 aa5.74□□□□□ -1.49
SMG8-205ENST00000580798 ANTXR1Q9H6X2 564 aa5.74□□□□□ -1.49
SMG8-205ENST00000580798 ROBO2Q9HCK4 1378 aa5.74□□□□□ -1.49
SMG8-205ENST00000580798 GSNP06396 782 aa5.73□□□□□ -1.49
SMG8-205ENST00000580798 AUHQ13825 339 aaKnown RBP5.73□□□□□ -1.49
SMG8-205ENST00000580798 TBC1D10BQ4KMP7 808 aaPredicted RBP5.73□□□□□ -1.49
SMG8-205ENST00000580798 NLRC3Q7RTR2 1065 aa5.73□□□□□ -1.49
SMG8-205ENST00000580798 Q8N1X5 172 aa5.73□□□□□ -1.49
SMG8-205ENST00000580798 NOX5Q96PH1 765 aa5.73□□□□□ -1.49
SMG8-205ENST00000580798 EHMT1Q9H9B1 1298 aa5.73□□□□□ -1.49
SMG8-205ENST00000580798 SPATA6Q9NWH7 488 aaPredicted RBP5.73□□□□□ -1.49
SMG8-205ENST00000580798 PRR13Q9NZ81 148 aa5.73□□□□□ -1.49
SMG8-205ENST00000580798 UBP1Q9NZI7 540 aa5.73□□□□□ -1.49
SMG8-205ENST00000580798 ADAMTS1Q9UHI8 967 aa5.73□□□□□ -1.49
SMG8-205ENST00000580798 PLATP00750 562 aa5.72□□□□□ -1.49
SMG8-205ENST00000580798 TACR1P25103 407 aa5.72□□□□□ -1.49
SMG8-205ENST00000580798 GDF5P43026 501 aa5.72□□□□□ -1.49
SMG8-205ENST00000580798 SARSP49591 514 aaKnown RBP5.72□□□□□ -1.49
SMG8-205ENST00000580798 CLCQ05315 142 aa5.72□□□□□ -1.49
SMG8-205ENST00000580798 SEZ6Q53EL9 994 aa5.72□□□□□ -1.49
SMG8-205ENST00000580798 GK5Q6ZS86 529 aa5.72□□□□□ -1.49
SMG8-205ENST00000580798 ALG3Q92685 438 aa5.72□□□□□ -1.49
SMG8-205ENST00000580798 SLC6A18Q96N87 628 aa5.72□□□□□ -1.49
SMG8-205ENST00000580798 MRIQ9BWK5 157 aa5.72□□□□□ -1.49
SMG8-205ENST00000580798 GZF1Q9H116 711 aaPredicted RBP5.72□□□□□ -1.49
SMG8-205ENST00000580798 BCAS3Q9H6U6 928 aa5.72□□□□□ -1.49
SMG8-205ENST00000580798 NTMQ9P121 344 aa5.72□□□□□ -1.49
SMG8-205ENST00000580798 GGT7Q9UJ14 662 aa5.72□□□□□ -1.49
SMG8-205ENST00000580798 DBR1Q9UK59 544 aaKnown RBP5.72□□□□□ -1.49
SMG8-205ENST00000580798 FGF10O15520 208 aaPredicted RBP5.71□□□□□ -1.5
SMG8-205ENST00000580798 TACR2P21452 398 aa5.71□□□□□ -1.5
SMG8-205ENST00000580798 PMLP29590 882 aa5.71□□□□□ -1.5
SMG8-205ENST00000580798 MRPL58Q14197 206 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms