RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 ZNF214Q9UL59 606 aaPredicted RBP16.46■□□□□ 0.23
SKA2-205ENST00000580541 RLFQ13129 1914 aa16.45■□□□□ 0.22
SKA2-205ENST00000580541 ALAS1P13196 640 aa16.45■□□□□ 0.22
SKA2-205ENST00000580541 CALML3P27482 149 aa16.45■□□□□ 0.22
SKA2-205ENST00000580541 GJB2P29033 226 aa16.45■□□□□ 0.22
SKA2-205ENST00000580541 MAPK4P31152 587 aa16.45■□□□□ 0.22
SKA2-205ENST00000580541 MRPL12P52815 198 aaKnown RBP16.45■□□□□ 0.22
SKA2-205ENST00000580541 NAPAP54920 295 aa16.45■□□□□ 0.22
SKA2-205ENST00000580541 SNAP25P60880 206 aa16.45■□□□□ 0.22
SKA2-205ENST00000580541 USH1GQ495M9 461 aa16.45■□□□□ 0.22
SKA2-205ENST00000580541 MCTP2Q6DN12 878 aa16.45■□□□□ 0.22
SKA2-205ENST00000580541 BICD2Q8TD16 824 aa16.45■□□□□ 0.22
SKA2-205ENST00000580541 AGBL1Q96MI9 1066 aa16.45■□□□□ 0.22
SKA2-205ENST00000580541 TRERF1Q96PN7 1200 aa16.45■□□□□ 0.22
SKA2-205ENST00000580541 C6orf50Q9HD87 102 aa16.45■□□□□ 0.22
SKA2-205ENST00000580541 BTBD7Q9P203 1132 aa16.45■□□□□ 0.22
SKA2-205ENST00000580541 CPA4Q9UI42 421 aa16.45■□□□□ 0.22
SKA2-205ENST00000580541 PARP14Q460N5 1801 aa16.45■□□□□ 0.22
SKA2-205ENST00000580541 hCG_1642624A0A1W2PR95 340 aa16.44■□□□□ 0.22
SKA2-205ENST00000580541 STRNO43815 780 aa16.44■□□□□ 0.22
SKA2-205ENST00000580541 JAK2O60674 1132 aa16.44■□□□□ 0.22
SKA2-205ENST00000580541 ST3GAL1Q11201 340 aa16.44■□□□□ 0.22
SKA2-205ENST00000580541 SAFBQ15424 915 aaKnown RBP eCLIP16.44■□□□□ 0.22
SKA2-205ENST00000580541 PKN1Q16512 942 aa16.44■□□□□ 0.22
SKA2-205ENST00000580541 SLC35G1Q2M3R5 365 aa16.44■□□□□ 0.22
SKA2-205ENST00000580541 NOM1Q5C9Z4 860 aaKnown RBP16.44■□□□□ 0.22
SKA2-205ENST00000580541 NCAPG2Q86XI2 1143 aa16.44■□□□□ 0.22
SKA2-205ENST00000580541 CUL5Q93034 780 aa16.44■□□□□ 0.22
SKA2-205ENST00000580541 C8orf76Q96K31 380 aa16.44■□□□□ 0.22
SKA2-205ENST00000580541 ACAD9Q9H845 621 aa16.44■□□□□ 0.22
SKA2-205ENST00000580541 BRMS1Q9HCU9 246 aa16.44■□□□□ 0.22
SKA2-205ENST00000580541 IVNS1ABPQ9Y6Y0 642 aa16.44■□□□□ 0.22
SKA2-205ENST00000580541 ZNF536O15090 1300 aa16.44■□□□□ 0.22
SKA2-205ENST00000580541 H3BQV1 296 aa16.43■□□□□ 0.22
SKA2-205ENST00000580541 TBC1D8O95759 1140 aa16.43■□□□□ 0.22
SKA2-205ENST00000580541 BCRP11274 1271 aa16.43■□□□□ 0.22
SKA2-205ENST00000580541 FDPSP14324 419 aaKnown RBP16.43■□□□□ 0.22
SKA2-205ENST00000580541 NLRP5P59047 1200 aa16.43■□□□□ 0.22
SKA2-205ENST00000580541 IFFO2Q5TF58 517 aa16.43■□□□□ 0.22
SKA2-205ENST00000580541 LARP1BQ659C4 914 aaKnown RBP16.43■□□□□ 0.22
SKA2-205ENST00000580541 COA7Q96BR5 231 aa16.43■□□□□ 0.22
SKA2-205ENST00000580541 MOV10L1Q9BXT6 1211 aaKnown RBP16.43■□□□□ 0.22
SKA2-205ENST00000580541 PSTPIP2Q9H939 334 aa16.43■□□□□ 0.22
SKA2-205ENST00000580541 TXNRD2Q9NNW7 524 aa16.43■□□□□ 0.22
SKA2-205ENST00000580541 RNF146Q9NTX7 359 aa16.43■□□□□ 0.22
SKA2-205ENST00000580541 ESYT2A0FGR8 921 aa16.42■□□□□ 0.22
SKA2-205ENST00000580541 SMCO2A6NFE2 343 aa16.42■□□□□ 0.22
SKA2-205ENST00000580541 STXBP3O00186 592 aa16.42■□□□□ 0.22
SKA2-205ENST00000580541 PPFIA3O75145 1194 aa16.42■□□□□ 0.22
SKA2-205ENST00000580541 CNMDO75829 334 aa16.42■□□□□ 0.22
SKA2-205ENST00000580541 FCER1AP12319 257 aa16.42■□□□□ 0.22
SKA2-205ENST00000580541 ERCC3P19447 782 aa16.42■□□□□ 0.22
SKA2-205ENST00000580541 SP3Q02447 781 aa16.42■□□□□ 0.22
SKA2-205ENST00000580541 Q3C1V9 767 aa16.42■□□□□ 0.22
SKA2-205ENST00000580541 WDR78Q5VTH9 848 aa16.42■□□□□ 0.22
SKA2-205ENST00000580541 WWC2Q6AWC2 1192 aa16.42■□□□□ 0.22
SKA2-205ENST00000580541 HOMER2Q9NSB8 354 aa16.42■□□□□ 0.22
SKA2-205ENST00000580541 WBP1LQ9NX94 342 aa16.42■□□□□ 0.22
SKA2-205ENST00000580541 SLC5A4Q9NY91 659 aa16.42■□□□□ 0.22
SKA2-205ENST00000580541 PFASO15067 1338 aa16.42■□□□□ 0.22
SKA2-205ENST00000580541 ADGRA2Q96PE1 1338 aa16.42■□□□□ 0.22
SKA2-205ENST00000580541 COL11A1P12107 1806 aaPredicted RBP16.41■□□□□ 0.22
SKA2-205ENST00000580541 GCOM1H8Y6P7 765 aaPredicted RBP16.41■□□□□ 0.22
SKA2-205ENST00000580541 PPP1R11O60927 126 aaPredicted RBP16.41■□□□□ 0.22
SKA2-205ENST00000580541 POLR2MP0CAP2 368 aa16.41■□□□□ 0.22
SKA2-205ENST00000580541 ADCY7P51828 1080 aa16.41■□□□□ 0.22
SKA2-205ENST00000580541 KCTD2Q14681 263 aa16.41■□□□□ 0.22
SKA2-205ENST00000580541 ABRAQ8N0Z2 381 aa16.41■□□□□ 0.22
SKA2-205ENST00000580541 ANKRD35Q8N283 1001 aa16.41■□□□□ 0.22
SKA2-205ENST00000580541 GPKOWQ92917 476 aaPredicted RBP eCLIP16.41■□□□□ 0.22
SKA2-205ENST00000580541 IPO9Q96P70 1041 aaKnown RBP16.41■□□□□ 0.22
SKA2-205ENST00000580541 ZMYND12Q9H0C1 365 aa16.41■□□□□ 0.22
SKA2-205ENST00000580541 RIC8AQ9NPQ8 531 aa16.41■□□□□ 0.22
SKA2-205ENST00000580541 FOXD4L1Q9NU39 408 aa16.41■□□□□ 0.22
SKA2-205ENST00000580541 THSD7BQ9C0I4 1608 aa16.41■□□□□ 0.22
SKA2-205ENST00000580541 B4DLN1 442 aa16.4■□□□□ 0.22
SKA2-205ENST00000580541 FOSP01100 380 aaPredicted RBP16.4■□□□□ 0.22
SKA2-205ENST00000580541 GNRH1P01148 92 aa16.4■□□□□ 0.22
SKA2-205ENST00000580541 HOXD10P28358 340 aa16.4■□□□□ 0.22
SKA2-205ENST00000580541 FCGRTP55899 365 aa16.4■□□□□ 0.22
SKA2-205ENST00000580541 POTEEQ6S8J3 1075 aa16.4■□□□□ 0.22
SKA2-205ENST00000580541 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.4■□□□□ 0.22
SKA2-205ENST00000580541 PLEKHH3Q7Z736 793 aa16.4■□□□□ 0.22
SKA2-205ENST00000580541 FBXO18Q8NFZ0 1043 aa16.4■□□□□ 0.22
SKA2-205ENST00000580541 ERO1AQ96HE7 468 aa16.4■□□□□ 0.22
SKA2-205ENST00000580541 EHMT1Q9H9B1 1298 aa16.4■□□□□ 0.22
SKA2-205ENST00000580541 VPS54Q9P1Q0 977 aa16.4■□□□□ 0.22
SKA2-205ENST00000580541 RIPK3Q9Y572 518 aa16.4■□□□□ 0.22
SKA2-205ENST00000580541 GPR25O00155 361 aa16.39■□□□□ 0.21
SKA2-205ENST00000580541 PIK3CDO00329 1044 aa16.39■□□□□ 0.21
SKA2-205ENST00000580541 FKTNO75072 461 aa16.39■□□□□ 0.21
SKA2-205ENST00000580541 CFBP00751 764 aa16.39■□□□□ 0.21
SKA2-205ENST00000580541 GNL2Q13823 731 aaKnown RBP16.39■□□□□ 0.21
SKA2-205ENST00000580541 RNF207Q6ZRF8 634 aa16.39■□□□□ 0.21
SKA2-205ENST00000580541 JMYQ8N9B5 988 aa16.39■□□□□ 0.21
SKA2-205ENST00000580541 SPRYD3Q8NCJ5 442 aa16.39■□□□□ 0.21
SKA2-205ENST00000580541 MMP19Q99542 508 aa16.39■□□□□ 0.21
SKA2-205ENST00000580541 MPHOSPH6Q99547 160 aaKnown RBP16.39■□□□□ 0.21
SKA2-205ENST00000580541 PHF20Q9BVI0 1012 aa16.39■□□□□ 0.21
SKA2-205ENST00000580541 PCDHA4Q9UN74 947 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms