RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 SUPT20HL2P0C7V6 817 aa14.57□□□□□ -0.08
CDK5RAP3-216ENST00000579853 MS4A1P11836 297 aa14.57□□□□□ -0.08
CDK5RAP3-216ENST00000579853 ATP2A2P16615 1042 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-216ENST00000579853 CCL23P55773 120 aa14.57□□□□□ -0.08
CDK5RAP3-216ENST00000579853 SKIV2LQ15477 1246 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-216ENST00000579853 TKFCQ3LXA3 575 aa14.57□□□□□ -0.08
CDK5RAP3-216ENST00000579853 TLK2Q86UE8 772 aa14.57□□□□□ -0.08
CDK5RAP3-216ENST00000579853 MICALL1Q8N3F8 863 aa14.57□□□□□ -0.08
CDK5RAP3-216ENST00000579853 FAM133AQ8N9E0 248 aa14.57□□□□□ -0.08
CDK5RAP3-216ENST00000579853 GMCL1P1Q8NEA9 526 aa14.57□□□□□ -0.08
CDK5RAP3-216ENST00000579853 PUS7LQ9H0K6 701 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-216ENST00000579853 COG6Q9Y2V7 657 aa14.57□□□□□ -0.08
CDK5RAP3-216ENST00000579853 HCN4Q9Y3Q4 1203 aa14.57□□□□□ -0.08
CDK5RAP3-216ENST00000579853 TTLL1O95922 423 aa14.56□□□□□ -0.08
CDK5RAP3-216ENST00000579853 ACTN1P12814 892 aa14.56□□□□□ -0.08
CDK5RAP3-216ENST00000579853 CNTN2Q02246 1040 aa14.56□□□□□ -0.08
CDK5RAP3-216ENST00000579853 SLFNL1Q499Z3 407 aa14.56□□□□□ -0.08
CDK5RAP3-216ENST00000579853 TMEM67Q5HYA8 995 aa14.56□□□□□ -0.08
CDK5RAP3-216ENST00000579853 IQSEC1Q6DN90 963 aa14.56□□□□□ -0.08
CDK5RAP3-216ENST00000579853 ZNF444Q8N0Y2 327 aaPredicted RBP14.56□□□□□ -0.08
CDK5RAP3-216ENST00000579853 CHURC1Q8WUH1 139 aa14.56□□□□□ -0.08
CDK5RAP3-216ENST00000579853 WNT8AQ9H1J5 351 aa14.56□□□□□ -0.08
CDK5RAP3-216ENST00000579853 HOMER2Q9NSB8 354 aa14.56□□□□□ -0.08
CDK5RAP3-216ENST00000579853 UMODL1Q5DID0 1318 aa14.56□□□□□ -0.08
CDK5RAP3-216ENST00000579853 IGKV6D-41A0A0C4DH26 115 aa14.55□□□□□ -0.08
CDK5RAP3-216ENST00000579853 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-216ENST00000579853 DYNC1LI2O43237 492 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-216ENST00000579853 B4GALT4O60513 344 aa14.55□□□□□ -0.08
CDK5RAP3-216ENST00000579853 BMP3P12645 472 aa14.55□□□□□ -0.08
CDK5RAP3-216ENST00000579853 STAT2P52630 851 aa14.55□□□□□ -0.08
CDK5RAP3-216ENST00000579853 RABGGTBP53611 331 aa14.55□□□□□ -0.08
CDK5RAP3-216ENST00000579853 TFF2Q03403 129 aa14.55□□□□□ -0.08
CDK5RAP3-216ENST00000579853 FAM160B2Q86V87 743 aa14.55□□□□□ -0.08
CDK5RAP3-216ENST00000579853 STRBPQ96SI9 672 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-216ENST00000579853 TRPV6Q9H1D0 765 aa14.55□□□□□ -0.08
CDK5RAP3-216ENST00000579853 A1CFQ9NQ94 594 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-216ENST00000579853 MTMR4Q9NYA4 1195 aa14.55□□□□□ -0.08
CDK5RAP3-216ENST00000579853 ASTN1O14525 1302 aa14.55□□□□□ -0.08
CDK5RAP3-216ENST00000579853 GSG1L2A8MUP6 293 aa14.54□□□□□ -0.08
CDK5RAP3-216ENST00000579853 MINDY4BA8MYZ0 360 aa14.54□□□□□ -0.08
CDK5RAP3-216ENST00000579853 KIF28PB7ZC32 967 aa14.54□□□□□ -0.08
CDK5RAP3-216ENST00000579853 GNAT2P19087 354 aa14.54□□□□□ -0.08
CDK5RAP3-216ENST00000579853 PPP4R3BQ5MIZ7 849 aa14.54□□□□□ -0.08
CDK5RAP3-216ENST00000579853 PHOSPHO2Q8TCD6 241 aa14.54□□□□□ -0.08
CDK5RAP3-216ENST00000579853 NECAB3Q96P71 396 aaPredicted RBP14.54□□□□□ -0.08
CDK5RAP3-216ENST00000579853 SLC9A7Q96T83 725 aa14.54□□□□□ -0.08
CDK5RAP3-216ENST00000579853 BCL11AQ9H165 835 aa14.54□□□□□ -0.08
CDK5RAP3-216ENST00000579853 ALDH8A1Q9H2A2 487 aaPredicted RBP14.54□□□□□ -0.08
CDK5RAP3-216ENST00000579853 CHMP4BQ9H444 224 aaKnown RBP14.54□□□□□ -0.08
CDK5RAP3-216ENST00000579853 VTA1Q9NP79 307 aa14.54□□□□□ -0.08
CDK5RAP3-216ENST00000579853 RNF146Q9NTX7 359 aa14.54□□□□□ -0.08
CDK5RAP3-216ENST00000579853 POLR3EQ9NVU0 708 aa14.54□□□□□ -0.08
CDK5RAP3-216ENST00000579853 MTCH2Q9Y6C9 303 aa14.54□□□□□ -0.08
CDK5RAP3-216ENST00000579853 GRIN2DO15399 1336 aa14.54□□□□□ -0.08
CDK5RAP3-216ENST00000579853 TMEM232C9JQI7 657 aa14.53□□□□□ -0.08
CDK5RAP3-216ENST00000579853 SMPD1P17405 629 aa14.53□□□□□ -0.08
CDK5RAP3-216ENST00000579853 RFC2P35250 354 aa14.53□□□□□ -0.08
CDK5RAP3-216ENST00000579853 KCNQ1P51787 676 aa14.53□□□□□ -0.08
CDK5RAP3-216ENST00000579853 SLFN13Q68D06 897 aa14.53□□□□□ -0.08
CDK5RAP3-216ENST00000579853 CEP95Q96GE4 821 aa14.53□□□□□ -0.08
CDK5RAP3-216ENST00000579853 AGBL1Q96MI9 1066 aa14.53□□□□□ -0.08
CDK5RAP3-216ENST00000579853 TRIOO75962 3097 aa14.52□□□□□ -0.08
CDK5RAP3-216ENST00000579853 LOC102724159A0A0B4J2E5 919 aa14.52□□□□□ -0.09
CDK5RAP3-216ENST00000579853 SOWAHBA6NEL2 793 aa14.52□□□□□ -0.09
CDK5RAP3-216ENST00000579853 PLA2G6O60733 806 aa14.52□□□□□ -0.09
CDK5RAP3-216ENST00000579853 CA3P07451 260 aa14.52□□□□□ -0.09
CDK5RAP3-216ENST00000579853 TSPY3P0CV98 308 aa14.52□□□□□ -0.09
CDK5RAP3-216ENST00000579853 TSPY8P0CW00 308 aa14.52□□□□□ -0.09
CDK5RAP3-216ENST00000579853 MYOGP15173 224 aa14.52□□□□□ -0.09
CDK5RAP3-216ENST00000579853 TDO2P48775 406 aa14.52□□□□□ -0.09
CDK5RAP3-216ENST00000579853 IKQ13123 557 aaPredicted RBP14.52□□□□□ -0.09
CDK5RAP3-216ENST00000579853 PWP2Q15269 919 aaKnown RBP14.52□□□□□ -0.09
CDK5RAP3-216ENST00000579853 BRDTQ58F21 947 aaPredicted RBP14.52□□□□□ -0.09
CDK5RAP3-216ENST00000579853 TMEM31Q5JXX7 168 aa14.52□□□□□ -0.09
CDK5RAP3-216ENST00000579853 STK11IPQ8N1F8 1099 aa14.52□□□□□ -0.09
CDK5RAP3-216ENST00000579853 STAG1Q8WVM7 1258 aa14.52□□□□□ -0.09
CDK5RAP3-216ENST00000579853 SCLYQ96I15 445 aa14.52□□□□□ -0.09
CDK5RAP3-216ENST00000579853 GMCL1Q96IK5 515 aa14.52□□□□□ -0.09
CDK5RAP3-216ENST00000579853 TRERF1Q96PN7 1200 aa14.52□□□□□ -0.09
CDK5RAP3-216ENST00000579853 LRFN3Q9BTN0 628 aa14.52□□□□□ -0.09
CDK5RAP3-216ENST00000579853 ISY1Q9ULR0 285 aaKnown RBP14.52□□□□□ -0.09
CDK5RAP3-216ENST00000579853 DDX19BQ9UMR2 479 aa14.52□□□□□ -0.09
CDK5RAP3-216ENST00000579853 PLIN4Q96Q06 1357 aa14.51□□□□□ -0.09
CDK5RAP3-216ENST00000579853 TNKSO95271 1327 aa14.51□□□□□ -0.09
CDK5RAP3-216ENST00000579853 CHGBP05060 677 aa14.51□□□□□ -0.09
CDK5RAP3-216ENST00000579853 ZFYP08048 801 aaPredicted RBP14.51□□□□□ -0.09
CDK5RAP3-216ENST00000579853 SLC3A2P08195 630 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP3-216ENST00000579853 SLC1A4P43007 532 aa14.51□□□□□ -0.09
CDK5RAP3-216ENST00000579853 CPT1AP50416 773 aa14.51□□□□□ -0.09
CDK5RAP3-216ENST00000579853 PDE4BQ07343 736 aa14.51□□□□□ -0.09
CDK5RAP3-216ENST00000579853 TTLL4Q14679 1199 aa14.51□□□□□ -0.09
CDK5RAP3-216ENST00000579853 DUSP28Q4G0W2 176 aa14.51□□□□□ -0.09
CDK5RAP3-216ENST00000579853 TAPT1Q6NXT6 567 aa14.51□□□□□ -0.09
CDK5RAP3-216ENST00000579853 KIAA1211Q6ZU35 1233 aa14.51□□□□□ -0.09
CDK5RAP3-216ENST00000579853 LRRC47Q8N1G4 583 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP3-216ENST00000579853 NEDD1Q8NHV4 660 aa14.51□□□□□ -0.09
CDK5RAP3-216ENST00000579853 PANK1Q8TE04 598 aa14.51□□□□□ -0.09
CDK5RAP3-216ENST00000579853 APPBP2Q92624 585 aa14.51□□□□□ -0.09
CDK5RAP3-216ENST00000579853 HLA-CQ95604 372 aa14.51□□□□□ -0.09
CDK5RAP3-216ENST00000579853 GPHNQ9NQX3 736 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms