RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 CLEC17AQ6ZS10 378 aa15.91■□□□□ 0.14
TSEN54-206ENST00000579449 NOSTRINQ8IVI9 506 aa15.91■□□□□ 0.14
TSEN54-206ENST00000579449 BICD2Q8TD16 824 aa15.91■□□□□ 0.14
TSEN54-206ENST00000579449 RASGRP4Q8TDF6 673 aa15.91■□□□□ 0.14
TSEN54-206ENST00000579449 CUL5Q93034 780 aa15.91■□□□□ 0.14
TSEN54-206ENST00000579449 TNFRSF25Q93038 417 aa15.91■□□□□ 0.14
TSEN54-206ENST00000579449 HHIPL1Q96JK4 782 aa15.91■□□□□ 0.14
TSEN54-206ENST00000579449 PSTPIP2Q9H939 334 aa15.91■□□□□ 0.14
TSEN54-206ENST00000579449 MRPL11Q9Y3B7 192 aaKnown RBP15.91■□□□□ 0.14
TSEN54-206ENST00000579449 ABCB11O95342 1321 aa15.91■□□□□ 0.14
TSEN54-206ENST00000579449 MYCNP04198 464 aaPredicted RBP15.9■□□□□ 0.14
TSEN54-206ENST00000579449 MRPL12P52815 198 aaKnown RBP15.9■□□□□ 0.14
TSEN54-206ENST00000579449 HERVK_113P62684 666 aa15.9■□□□□ 0.14
TSEN54-206ENST00000579449 DNM1Q05193 864 aaKnown RBP15.9■□□□□ 0.14
TSEN54-206ENST00000579449 TMEM132BQ14DG7 1078 aa15.9■□□□□ 0.14
TSEN54-206ENST00000579449 NOM1Q5C9Z4 860 aaKnown RBP15.9■□□□□ 0.14
TSEN54-206ENST00000579449 EARS2Q5JPH6 523 aaKnown RBP15.9■□□□□ 0.14
TSEN54-206ENST00000579449 MYSM1Q5VVJ2 828 aa15.9■□□□□ 0.14
TSEN54-206ENST00000579449 POTEEQ6S8J3 1075 aa15.9■□□□□ 0.14
TSEN54-206ENST00000579449 LBX2Q6XYB7 198 aa15.9■□□□□ 0.14
TSEN54-206ENST00000579449 ANKRD23Q86SG2 305 aa15.9■□□□□ 0.14
TSEN54-206ENST00000579449 CCDC102AQ96A19 550 aa15.9■□□□□ 0.14
TSEN54-206ENST00000579449 GLT8D2Q9H1C3 349 aa15.9■□□□□ 0.14
TSEN54-206ENST00000579449 PNMA2Q9UL42 364 aa15.9■□□□□ 0.14
TSEN54-206ENST00000579449 PCDHA6Q9UN73 950 aa15.9■□□□□ 0.14
TSEN54-206ENST00000579449 SLC45A1Q9Y2W3 748 aa15.9■□□□□ 0.14
TSEN54-206ENST00000579449 PCDHA8Q9Y5H6 950 aa15.9■□□□□ 0.14
TSEN54-206ENST00000579449 TESPA1A2RU30 521 aaPredicted RBP15.89■□□□□ 0.13
TSEN54-206ENST00000579449 FAM205CA6NFA0 338 aa15.89■□□□□ 0.13
TSEN54-206ENST00000579449 MANSC4A6NHS7 340 aaPredicted RBP15.89■□□□□ 0.13
TSEN54-206ENST00000579449 FAM155AB1AL88 458 aaPredicted RBP15.89■□□□□ 0.13
TSEN54-206ENST00000579449 PDHXO00330 501 aa15.89■□□□□ 0.13
TSEN54-206ENST00000579449 OPLAHO14841 1288 aa15.89■□□□□ 0.13
TSEN54-206ENST00000579449 ALAS1P13196 640 aa15.89■□□□□ 0.13
TSEN54-206ENST00000579449 OAZ1P54368 228 aa15.89■□□□□ 0.13
TSEN54-206ENST00000579449 UBE2SQ16763 222 aa15.89■□□□□ 0.13
TSEN54-206ENST00000579449 REXO1Q8N1G1 1221 aaKnown RBP15.89■□□□□ 0.13
TSEN54-206ENST00000579449 MB21D1Q8N884 522 aa15.89■□□□□ 0.13
TSEN54-206ENST00000579449 GBP4Q96PP9 640 aa15.89■□□□□ 0.13
TSEN54-206ENST00000579449 PTPN18Q99952 460 aa15.89■□□□□ 0.13
TSEN54-206ENST00000579449 TMEM260Q9NX78 707 aa15.89■□□□□ 0.13
TSEN54-206ENST00000579449 BIN2Q9UBW5 565 aaPredicted RBP15.89■□□□□ 0.13
TSEN54-206ENST00000579449 PNMA3Q9UL41 463 aa15.89■□□□□ 0.13
TSEN54-206ENST00000579449 ZNF214Q9UL59 606 aaPredicted RBP15.89■□□□□ 0.13
TSEN54-206ENST00000579449 RBBP6Q7Z6E9 1792 aaKnown RBP15.88■□□□□ 0.13
TSEN54-206ENST00000579449 ATP2A1O14983 1001 aa15.88■□□□□ 0.13
TSEN54-206ENST00000579449 CLK2P49760 499 aaKnown RBP15.88■□□□□ 0.13
TSEN54-206ENST00000579449 APLP1P51693 650 aa15.88■□□□□ 0.13
TSEN54-206ENST00000579449 PLS1Q14651 629 aa15.88■□□□□ 0.13
TSEN54-206ENST00000579449 JAKMIP3Q5VZ66 844 aa15.88■□□□□ 0.13
TSEN54-206ENST00000579449 SNRNP48Q6IEG0 339 aaKnown RBP15.88■□□□□ 0.13
TSEN54-206ENST00000579449 PIK3AP1Q6ZUJ8 805 aa15.88■□□□□ 0.13
TSEN54-206ENST00000579449 FAM43AQ8N2R8 423 aa15.88■□□□□ 0.13
TSEN54-206ENST00000579449 ZNF396Q96N95 335 aaPredicted RBP15.88■□□□□ 0.13
TSEN54-206ENST00000579449 BTBD7Q9P203 1132 aa15.88■□□□□ 0.13
TSEN54-206ENST00000579449 TFIP11Q9UBB9 837 aaKnown RBP15.88■□□□□ 0.13
TSEN54-206ENST00000579449 CCDC194A0A1B0GVG4 234 aa15.87■□□□□ 0.13
TSEN54-206ENST00000579449 MEIS2O14770 477 aa15.87■□□□□ 0.13
TSEN54-206ENST00000579449 PEX10O60683 326 aa15.87■□□□□ 0.13
TSEN54-206ENST00000579449 CNMDO75829 334 aa15.87■□□□□ 0.13
TSEN54-206ENST00000579449 ATXN8OSP0DMR3 200 aa15.87■□□□□ 0.13
TSEN54-206ENST00000579449 CYP2C8P10632 490 aa15.87■□□□□ 0.13
TSEN54-206ENST00000579449 NCLP19338 710 aaKnown RBP15.87■□□□□ 0.13
TSEN54-206ENST00000579449 STAT3P40763 770 aa15.87■□□□□ 0.13
TSEN54-206ENST00000579449 KRT85P78386 507 aa15.87■□□□□ 0.13
TSEN54-206ENST00000579449 MUM1L1Q5H9M0 696 aa15.87■□□□□ 0.13
TSEN54-206ENST00000579449 USP17L6PQ6QN14 398 aa15.87■□□□□ 0.13
TSEN54-206ENST00000579449 PAXIP1Q6ZW49 1069 aaPredicted RBP15.87■□□□□ 0.13
TSEN54-206ENST00000579449 KRT25Q7Z3Z0 450 aa15.87■□□□□ 0.13
TSEN54-206ENST00000579449 CLEC4DQ8WXI8 215 aa15.87■□□□□ 0.13
TSEN54-206ENST00000579449 TBC1D5Q92609 795 aa15.87■□□□□ 0.13
TSEN54-206ENST00000579449 TRERF1Q96PN7 1200 aa15.87■□□□□ 0.13
TSEN54-206ENST00000579449 PAGR1Q9BTK6 254 aa15.87■□□□□ 0.13
TSEN54-206ENST00000579449 TEX13BQ9BXU2 312 aa15.87■□□□□ 0.13
TSEN54-206ENST00000579449 CREBZFQ9NS37 354 aa15.87■□□□□ 0.13
TSEN54-206ENST00000579449 HOMER2Q9NSB8 354 aa15.87■□□□□ 0.13
TSEN54-206ENST00000579449 CNPY2Q9Y2B0 182 aa15.87■□□□□ 0.13
TSEN54-206ENST00000579449 RIPK3Q9Y572 518 aa15.87■□□□□ 0.13
TSEN54-206ENST00000579449 MYH7BA7E2Y1 1941 aa15.87■□□□□ 0.13
TSEN54-206ENST00000579449 NFIBO00712 420 aa15.86■□□□□ 0.13
TSEN54-206ENST00000579449 CFBP00751 764 aa15.86■□□□□ 0.13
TSEN54-206ENST00000579449 TOB1P50616 345 aaPredicted RBP15.86■□□□□ 0.13
TSEN54-206ENST00000579449 TKFCQ3LXA3 575 aa15.86■□□□□ 0.13
TSEN54-206ENST00000579449 ATL3Q6DD88 541 aa15.86■□□□□ 0.13
TSEN54-206ENST00000579449 CYP4F22Q6NT55 531 aa15.86■□□□□ 0.13
TSEN54-206ENST00000579449 GTF3C2Q8WUA4 911 aaPredicted RBP15.86■□□□□ 0.13
TSEN54-206ENST00000579449 PGBD1Q96JS3 809 aa15.86■□□□□ 0.13
TSEN54-206ENST00000579449 USP28Q96RU2 1077 aa15.86■□□□□ 0.13
TSEN54-206ENST00000579449 FTOQ9C0B1 505 aaKnown RBP eCLIP15.86■□□□□ 0.13
TSEN54-206ENST00000579449 RNF146Q9NTX7 359 aa15.86■□□□□ 0.13
TSEN54-206ENST00000579449 RBPJLQ9UBG7 517 aa15.86■□□□□ 0.13
TSEN54-206ENST00000579449 NOL7Q9UMY1 257 aaKnown RBP15.86■□□□□ 0.13
TSEN54-206ENST00000579449 RABGAP1Q9Y3P9 1069 aa15.86■□□□□ 0.13
TSEN54-206ENST00000579449 GCOM1H8Y6P7 765 aaPredicted RBP15.85■□□□□ 0.13
TSEN54-206ENST00000579449 PIK3CDO00329 1044 aa15.85■□□□□ 0.13
TSEN54-206ENST00000579449 IGF2BP3O00425 579 aaKnown RBP eCLIP15.85■□□□□ 0.13
TSEN54-206ENST00000579449 POLR2MP0CAP2 368 aa15.85■□□□□ 0.13
TSEN54-206ENST00000579449 ATP2B1P20020 1258 aa15.85■□□□□ 0.13
TSEN54-206ENST00000579449 HOXA13P31271 388 aaPredicted RBP15.85■□□□□ 0.13
TSEN54-206ENST00000579449 INHBEP58166 350 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms