RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 ASB14A6NK59 587 aa12.63□□□□□ -0.39
CSNK1D-210ENST00000579308 CSF2RAP15509 400 aa12.63□□□□□ -0.39
CSNK1D-210ENST00000579308 MX1P20591 662 aa12.63□□□□□ -0.39
CSNK1D-210ENST00000579308 DNAJB2P25686 324 aa12.63□□□□□ -0.39
CSNK1D-210ENST00000579308 SNAP25P60880 206 aa12.63□□□□□ -0.39
CSNK1D-210ENST00000579308 BEX3Q00994 111 aa12.63□□□□□ -0.39
CSNK1D-210ENST00000579308 CTDSPL2Q05D32 466 aa12.63□□□□□ -0.39
CSNK1D-210ENST00000579308 PPIGQ13427 754 aaKnown RBP eCLIP12.63□□□□□ -0.397e-22■■■■■ 36.4
CSNK1D-210ENST00000579308 ALX1Q15699 326 aa12.63□□□□□ -0.39
CSNK1D-210ENST00000579308 MUM1L1Q5H9M0 696 aa12.63□□□□□ -0.39
CSNK1D-210ENST00000579308 VPS53Q5VIR6 699 aa12.63□□□□□ -0.39
CSNK1D-210ENST00000579308 TAPT1Q6NXT6 567 aa12.63□□□□□ -0.39
CSNK1D-210ENST00000579308 KCTD1Q719H9 257 aa12.63□□□□□ -0.39
CSNK1D-210ENST00000579308 MORC4Q8TE76 937 aa12.63□□□□□ -0.39
CSNK1D-210ENST00000579308 VTI1AQ96AJ9 217 aa12.63□□□□□ -0.39
CSNK1D-210ENST00000579308 CYP39A1Q9NYL5 469 aa12.63□□□□□ -0.39
CSNK1D-210ENST00000579308 PRR12Q9ULL5 1215 aa12.63□□□□□ -0.39
CSNK1D-210ENST00000579308 DDX49Q9Y6V7 483 aaKnown RBP12.63□□□□□ -0.39
CSNK1D-210ENST00000579308 MUC3AQ02505 3323 aa12.62□□□□□ -0.39
CSNK1D-210ENST00000579308 ORC4O43929 436 aa12.62□□□□□ -0.39
CSNK1D-210ENST00000579308 CABYRO75952 493 aa12.62□□□□□ -0.39
CSNK1D-210ENST00000579308 FOSL2P15408 326 aa12.62□□□□□ -0.39
CSNK1D-210ENST00000579308 SMPD1P17405 629 aa12.62□□□□□ -0.39
CSNK1D-210ENST00000579308 PTGS1P23219 599 aa12.62□□□□□ -0.39
CSNK1D-210ENST00000579308 IQSEC1Q6DN90 963 aa12.62□□□□□ -0.39
CSNK1D-210ENST00000579308 BTNL9Q6UXG8 535 aa12.62□□□□□ -0.39
CSNK1D-210ENST00000579308 RASGRP2Q7LDG7 609 aa12.62□□□□□ -0.39
CSNK1D-210ENST00000579308 CHMP4CQ96CF2 233 aa12.62□□□□□ -0.39
CSNK1D-210ENST00000579308 ZNF576Q9H609 170 aa12.62□□□□□ -0.39
CSNK1D-210ENST00000579308 PDGFCQ9NRA1 345 aa12.62□□□□□ -0.39
CSNK1D-210ENST00000579308 STX8Q9UNK0 236 aa12.62□□□□□ -0.39
CSNK1D-210ENST00000579308 Q9Y3F1 56 aa12.62□□□□□ -0.39
CSNK1D-210ENST00000579308 CHD9Q3L8U1 2897 aa12.62□□□□□ -0.39
CSNK1D-210ENST00000579308 PLXNA1Q9UIW2 1896 aa12.61□□□□□ -0.39
CSNK1D-210ENST00000579308 TSPY2A6NKD2 308 aa12.61□□□□□ -0.39
CSNK1D-210ENST00000579308 ICAM1P05362 532 aa12.61□□□□□ -0.39
CSNK1D-210ENST00000579308 ALAS1P13196 640 aa12.61□□□□□ -0.39
CSNK1D-210ENST00000579308 CYP2C18P33260 490 aa12.61□□□□□ -0.39
CSNK1D-210ENST00000579308 IKQ13123 557 aaPredicted RBP12.61□□□□□ -0.39
CSNK1D-210ENST00000579308 FSCN1Q16658 493 aaKnown RBP12.61□□□□□ -0.39
CSNK1D-210ENST00000579308 TMEM63BQ5T3F8 832 aa12.61□□□□□ -0.39
CSNK1D-210ENST00000579308 CCDC174Q6PII3 467 aa12.61□□□□□ -0.39
CSNK1D-210ENST00000579308 CXCL17Q6UXB2 119 aa12.61□□□□□ -0.39
CSNK1D-210ENST00000579308 ZNF365Q70YC5 407 aa12.61□□□□□ -0.39
CSNK1D-210ENST00000579308 TMEM199Q8N511 208 aa12.61□□□□□ -0.39
CSNK1D-210ENST00000579308 TIFAQ96CG3 184 aa12.61□□□□□ -0.39
CSNK1D-210ENST00000579308 PURBQ96QR8 312 aaKnown RBP12.61□□□□□ -0.39
CSNK1D-210ENST00000579308 RANBP17Q9H2T7 1088 aaKnown RBP12.61□□□□□ -0.39
CSNK1D-210ENST00000579308 TTC28Q96AY4 2481 aa12.61□□□□□ -0.39
CSNK1D-210ENST00000579308 GRXCR1A8MXD5 290 aa12.6□□□□□ -0.39
CSNK1D-210ENST00000579308 TLR3O15455 904 aaKnown RBP12.6□□□□□ -0.39
CSNK1D-210ENST00000579308 DYNC1LI2O43237 492 aaPredicted RBP12.6□□□□□ -0.39
CSNK1D-210ENST00000579308 RANBP6O60518 1105 aaKnown RBP12.6□□□□□ -0.39
CSNK1D-210ENST00000579308 FGAP02671 866 aa12.6□□□□□ -0.39
CSNK1D-210ENST00000579308 ACRP10323 421 aa12.6□□□□□ -0.39
CSNK1D-210ENST00000579308 PBX2P40425 430 aa12.6□□□□□ -0.39
CSNK1D-210ENST00000579308 ITGA7Q13683 1181 aa12.6□□□□□ -0.39
CSNK1D-210ENST00000579308 TTBK2Q6IQ55 1244 aa12.6□□□□□ -0.39
CSNK1D-210ENST00000579308 NOL8Q76FK4 1167 aaKnown RBP12.6□□□□□ -0.39
CSNK1D-210ENST00000579308 TLK2Q86UE8 772 aa12.6□□□□□ -0.39
CSNK1D-210ENST00000579308 TICAM2Q86XR7 235 aa12.6□□□□□ -0.39
CSNK1D-210ENST00000579308 DCAF4Q8WV16 495 aa12.6□□□□□ -0.39
CSNK1D-210ENST00000579308 HERVK_113Q902F9 699 aa12.6□□□□□ -0.39
CSNK1D-210ENST00000579308 EVI5LQ96CN4 794 aa12.6□□□□□ -0.39
CSNK1D-210ENST00000579308 VWCEQ96DN2 955 aa12.6□□□□□ -0.39
CSNK1D-210ENST00000579308 SEZ6LQ9BYH1 1024 aa12.6□□□□□ -0.39
CSNK1D-210ENST00000579308 PBX4Q9BYU1 374 aa12.6□□□□□ -0.39
CSNK1D-210ENST00000579308 PPP1R12CQ9BZL4 782 aa12.6□□□□□ -0.39
CSNK1D-210ENST00000579308 IL23AQ9NPF7 189 aa12.6□□□□□ -0.39
CSNK1D-210ENST00000579308 HELLSQ9NRZ9 838 aa12.6□□□□□ -0.39
CSNK1D-210ENST00000579308 TCP11L1Q9NUJ3 509 aa12.6□□□□□ -0.39
CSNK1D-210ENST00000579308 ISY1Q9ULR0 285 aaKnown RBP12.6□□□□□ -0.39
CSNK1D-210ENST00000579308 PDE1AP54750 535 aa12.59□□□□□ -0.39
CSNK1D-210ENST00000579308 ANKRD45Q5TZF3 282 aa12.59□□□□□ -0.39
CSNK1D-210ENST00000579308 PSRC1Q6PGN9 363 aaPredicted RBP12.59□□□□□ -0.39
CSNK1D-210ENST00000579308 FBXO16Q8IX29 292 aaPredicted RBP12.59□□□□□ -0.39
CSNK1D-210ENST00000579308 USP38Q8NB14 1042 aa12.59□□□□□ -0.39
CSNK1D-210ENST00000579308 TMEM47Q9BQJ4 181 aa12.59□□□□□ -0.39
CSNK1D-210ENST00000579308 AP5M1Q9H0R1 490 aa12.59□□□□□ -0.39
CSNK1D-210ENST00000579308 TRPV6Q9H1D0 765 aa12.59□□□□□ -0.39
CSNK1D-210ENST00000579308 VTA1Q9NP79 307 aa12.59□□□□□ -0.39
CSNK1D-210ENST00000579308 CCPG1Q9ULG6 757 aa12.59□□□□□ -0.39
CSNK1D-210ENST00000579308 LOC102724159A0A0B4J2E5 919 aa12.58□□□□□ -0.4
CSNK1D-210ENST00000579308 RBM47A0AV96 593 aaKnown RBP12.58□□□□□ -0.4
CSNK1D-210ENST00000579308 ZEB2O60315 1214 aa12.58□□□□□ -0.4
CSNK1D-210ENST00000579308 B4GALT4O60513 344 aa12.58□□□□□ -0.4
CSNK1D-210ENST00000579308 ABCB7O75027 752 aa12.58□□□□□ -0.4
CSNK1D-210ENST00000579308 TOP1P11387 765 aaKnown RBP12.58□□□□□ -0.4
CSNK1D-210ENST00000579308 SLC16A2P36021 539 aa12.58□□□□□ -0.4
CSNK1D-210ENST00000579308 BAATQ14032 418 aaPredicted RBP12.58□□□□□ -0.4
CSNK1D-210ENST00000579308 PWP2Q15269 919 aaKnown RBP12.58□□□□□ -0.4
CSNK1D-210ENST00000579308 DUSP28Q4G0W2 176 aa12.58□□□□□ -0.4
CSNK1D-210ENST00000579308 MCMDC2Q4G0Z9 681 aa12.58□□□□□ -0.4
CSNK1D-210ENST00000579308 NSMFQ6X4W1 530 aa12.58□□□□□ -0.4
CSNK1D-210ENST00000579308 EEPD1Q7L9B9 569 aa12.58□□□□□ -0.4
CSNK1D-210ENST00000579308 CLEC4DQ8WXI8 215 aa12.58□□□□□ -0.4
CSNK1D-210ENST00000579308 FAM227BQ96M60 508 aa12.58□□□□□ -0.4
CSNK1D-210ENST00000579308 NOC4LQ9BVI4 516 aaKnown RBP12.58□□□□□ -0.4
CSNK1D-210ENST00000579308 HIPK3Q9H422 1215 aa12.58□□□□□ -0.4
CSNK1D-210ENST00000579308 CXXC1Q9P0U4 656 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms