RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 USH1GQ495M9 461 aa23.01■■□□□ 1.27
SMG8-203ENST00000578922 USP49Q70CQ1 688 aa23.01■■□□□ 1.27
SMG8-203ENST00000578922 KRT25Q7Z3Z0 450 aa23.01■■□□□ 1.27
SMG8-203ENST00000578922 SYNPO2Q9UMS6 1093 aa23.01■■□□□ 1.27
SMG8-203ENST00000578922 HPSEQ9Y251 543 aa23.01■■□□□ 1.27
SMG8-203ENST00000578922 ATAD5Q96QE3 1844 aa23■■□□□ 1.27
SMG8-203ENST00000578922 STAT2P52630 851 aa23■■□□□ 1.27
SMG8-203ENST00000578922 DGKZQ13574 1117 aa23■■□□□ 1.27
SMG8-203ENST00000578922 PRKG1Q13976 671 aa23■■□□□ 1.27
SMG8-203ENST00000578922 ZKSCAN4Q969J2 545 aaPredicted RBP23■■□□□ 1.27
SMG8-203ENST00000578922 SH2D4AQ9H788 454 aa23■■□□□ 1.27
SMG8-203ENST00000578922 PRR12Q9ULL5 1215 aa23■■□□□ 1.27
SMG8-203ENST00000578922 VWA3AA6NCI4 1184 aa23■■□□□ 1.27
SMG8-203ENST00000578922 CTNND1O60716 968 aaKnown RBP23■■□□□ 1.27
SMG8-203ENST00000578922 BMP15O95972 392 aa23■■□□□ 1.27
SMG8-203ENST00000578922 ATP2C1P98194 919 aaPredicted RBP23■■□□□ 1.27
SMG8-203ENST00000578922 LETM2Q2VYF4 491 aa23■■□□□ 1.27
SMG8-203ENST00000578922 DCAF15Q66K64 600 aa23■■□□□ 1.27
SMG8-203ENST00000578922 PLA2G4DQ86XP0 818 aa23■■□□□ 1.27
SMG8-203ENST00000578922 WRNIP1Q96S55 665 aa23■■□□□ 1.27
SMG8-203ENST00000578922 KCNH3Q9ULD8 1083 aa23■■□□□ 1.27
SMG8-203ENST00000578922 ZNF165P49910 485 aa22.99■■□□□ 1.27
SMG8-203ENST00000578922 SPC24Q8NBT2 197 aa22.99■■□□□ 1.27
SMG8-203ENST00000578922 TBCKQ8TEA7 893 aa22.99■■□□□ 1.27
SMG8-203ENST00000578922 KIFC2Q96AC6 838 aa22.99■■□□□ 1.27
SMG8-203ENST00000578922 PSTPIP2Q9H939 334 aa22.99■■□□□ 1.27
SMG8-203ENST00000578922 RIC8AQ9NPQ8 531 aa22.99■■□□□ 1.27
SMG8-203ENST00000578922 A0A087WWV3 80 aa22.99■■□□□ 1.27
SMG8-203ENST00000578922 PPP1R18Q6NYC8 613 aa22.99■■□□□ 1.27
SMG8-203ENST00000578922 CUL5Q93034 780 aa22.99■■□□□ 1.27
SMG8-203ENST00000578922 ADARB2Q9NS39 739 aaKnown RBP22.99■■□□□ 1.27
SMG8-203ENST00000578922 ZNF75DP51815 510 aa22.98■■□□□ 1.27
SMG8-203ENST00000578922 BTNL9Q6UXG8 535 aa22.98■■□□□ 1.27
SMG8-203ENST00000578922 EPSTI1Q96J88 318 aa22.98■■□□□ 1.27
SMG8-203ENST00000578922 PYCARDQ9ULZ3 195 aa22.98■■□□□ 1.27
SMG8-203ENST00000578922 POLR2AP24928 1970 aaKnown RBP22.97■■□□□ 1.27
SMG8-203ENST00000578922 CCNT1O60563 726 aaKnown RBP22.97■■□□□ 1.27
SMG8-203ENST00000578922 FBXO11Q86XK2 927 aa22.97■■□□□ 1.27
SMG8-203ENST00000578922 PDILTQ8N807 584 aa22.97■■□□□ 1.27
SMG8-203ENST00000578922 AMNQ9BXJ7 453 aa22.97■■□□□ 1.27
SMG8-203ENST00000578922 FBXO28Q9NVF7 368 aa22.97■■□□□ 1.27
SMG8-203ENST00000578922 USP17L15C9J2P7 530 aa22.97■■□□□ 1.27
SMG8-203ENST00000578922 USP17L13C9JLJ4 530 aa22.97■■□□□ 1.27
SMG8-203ENST00000578922 USP17L11C9JVI0 530 aa22.97■■□□□ 1.27
SMG8-203ENST00000578922 USP17L18D6R9N7 530 aa22.97■■□□□ 1.27
SMG8-203ENST00000578922 USP17L22D6RA61 530 aa22.97■■□□□ 1.27
SMG8-203ENST00000578922 USP17L17D6RBQ6 530 aa22.97■■□□□ 1.27
SMG8-203ENST00000578922 USP17L19D6RCP7 530 aa22.97■■□□□ 1.27
SMG8-203ENST00000578922 USP17L20D6RJB6 530 aa22.97■■□□□ 1.27
SMG8-203ENST00000578922 CDC25BP30305 580 aa22.97■■□□□ 1.27
SMG8-203ENST00000578922 USP17L24Q0WX57 530 aa22.97■■□□□ 1.27
SMG8-203ENST00000578922 IL17AQ16552 155 aa22.97■■□□□ 1.27
SMG8-203ENST00000578922 USP17L6PQ6QN14 398 aa22.97■■□□□ 1.27
SMG8-203ENST00000578922 C17orf53Q8N3J3 647 aaPredicted RBP22.97■■□□□ 1.27
SMG8-203ENST00000578922 ZNF579Q8NAF0 562 aaKnown RBP22.97■■□□□ 1.27
SMG8-203ENST00000578922 TMEM60Q9H2L4 133 aa22.97■■□□□ 1.27
SMG8-203ENST00000578922 FAM237AA0A1B0GTK4 181 aa22.96■■□□□ 1.27
SMG8-203ENST00000578922 MRPL12P52815 198 aaKnown RBP22.96■■□□□ 1.27
SMG8-203ENST00000578922 LONRF3Q496Y0 759 aa22.96■■□□□ 1.27
SMG8-203ENST00000578922 CCDC174Q6PII3 467 aa22.96■■□□□ 1.27
SMG8-203ENST00000578922 NEK8Q86SG6 692 aa22.96■■□□□ 1.27
SMG8-203ENST00000578922 C4orf32Q8N8J7 132 aa22.96■■□□□ 1.27
SMG8-203ENST00000578922 FERMT2Q96AC1 680 aa22.96■■□□□ 1.27
SMG8-203ENST00000578922 TRIM5Q9C035 493 aa22.96■■□□□ 1.27
SMG8-203ENST00000578922 POLR2DO15514 142 aaKnown RBP22.96■■□□□ 1.27
SMG8-203ENST00000578922 SARM1Q6SZW1 724 aa22.95■■□□□ 1.26
SMG8-203ENST00000578922 SYMPKQ92797 1274 aaKnown RBP22.95■■□□□ 1.26
SMG8-203ENST00000578922 ADM5C9JUS6 153 aa22.94■■□□□ 1.26
SMG8-203ENST00000578922 PTGS1P23219 599 aa22.94■■□□□ 1.26
SMG8-203ENST00000578922 MTMR2Q13614 643 aa22.94■■□□□ 1.26
SMG8-203ENST00000578922 DPY19L2Q6NUT2 758 aa22.94■■□□□ 1.26
SMG8-203ENST00000578922 SCYL3Q8IZE3 742 aa22.94■■□□□ 1.26
SMG8-203ENST00000578922 HOOK2Q96ED9 719 aa22.94■■□□□ 1.26
SMG8-203ENST00000578922 DNAJC25Q9H1X3 360 aa22.94■■□□□ 1.26
SMG8-203ENST00000578922 STX1AQ16623 288 aa22.94■■□□□ 1.26
SMG8-203ENST00000578922 CHURC1Q8WUH1 139 aa22.94■■□□□ 1.26
SMG8-203ENST00000578922 MORC2Q9Y6X9 1032 aaPredicted RBP22.94■■□□□ 1.26
SMG8-203ENST00000578922 SSC5DA1L4H1 1573 aa22.93■■□□□ 1.26
SMG8-203ENST00000578922 CLK2P49760 499 aaKnown RBP22.93■■□□□ 1.26
SMG8-203ENST00000578922 SPP2Q13103 211 aa22.93■■□□□ 1.26
SMG8-203ENST00000578922 DRC7Q8IY82 874 aa22.93■■□□□ 1.26
SMG8-203ENST00000578922 CNNM3Q8NE01 707 aa22.93■■□□□ 1.26
SMG8-203ENST00000578922 DCPSQ96C86 337 aaKnown RBP22.93■■□□□ 1.26
SMG8-203ENST00000578922 PICK1Q9NRD5 415 aa22.93■■□□□ 1.26
SMG8-203ENST00000578922 ZNF112Q9UJU3 913 aa22.93■■□□□ 1.26
SMG8-203ENST00000578922 CCDC186Q7Z3E2 898 aa22.93■■□□□ 1.26
SMG8-203ENST00000578922 PPP2R3BQ9Y5P8 575 aa22.93■■□□□ 1.26
SMG8-203ENST00000578922 A0A087X0B3 334 aa22.92■■□□□ 1.26
SMG8-203ENST00000578922 FOXN1O15353 648 aa22.92■■□□□ 1.26
SMG8-203ENST00000578922 CDC25AP30304 524 aa22.92■■□□□ 1.26
SMG8-203ENST00000578922 KRBA2Q6ZNG9 492 aa22.92■■□□□ 1.26
SMG8-203ENST00000578922 TIGD1Q96MW7 591 aa22.92■■□□□ 1.26
SMG8-203ENST00000578922 KIAA1683Q9H0B3 1180 aa22.92■■□□□ 1.26
SMG8-203ENST00000578922 SERTAD1Q9UHV2 236 aa22.92■■□□□ 1.26
SMG8-203ENST00000578922 GOLGA6L19H0YKK7 550 aa22.91■■□□□ 1.26
SMG8-203ENST00000578922 BIN1O00499 593 aa22.91■■□□□ 1.26
SMG8-203ENST00000578922 NEMFO60524 1076 aa22.91■■□□□ 1.26
SMG8-203ENST00000578922 PNOCQ13519 176 aa22.91■■□□□ 1.26
SMG8-203ENST00000578922 IQCB1Q15051 598 aa22.91■■□□□ 1.26
SMG8-203ENST00000578922 SUPT20HL1Q3ZLR7 823 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms